FFCP PHASE1:Mm9::chr12:110797581..110797592,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:110797581..110797592,+|id=chr12:110797581..110797592,+|ontology_enrichment_celltype=CL:0000117!1.94e-07!23;CL:0000337!1.94e-07!23|ontology_enrichment_celltype_v019_2=CL:0002610,1.08e-13,3;CL:0002612,3.83e-13,3;CL:0000117,2.07e-08,23;CL:0000337,2.07e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.87e-19!50;UBERON:0006238!1.87e-19!50;UBERON:0002616!9.38e-19!49;UBERON:0001049!2.42e-18!52;UBERON:0005068!2.42e-18!52;UBERON:0006241!2.42e-18!52;UBERON:0007135!2.42e-18!52;UBERON:0000033!6.35e-17!63;UBERON:0001017!7.95e-17!73;UBERON:0005743!7.95e-17!73;UBERON:0000073!5.34e-16!75;UBERON:0001016!5.34e-16!75;UBERON:0002346!1.20e-15!71;UBERON:0003075!1.20e-15!71;UBERON:0007284!1.20e-15!71;UBERON:0002020!5.83e-14!34;UBERON:0003080!8.04e-14!40;UBERON:0003056!1.83e-13!49;UBERON:0002780!5.91e-13!39;UBERON:0001890!5.91e-13!39;UBERON:0006240!5.91e-13!39;UBERON:0002791!1.63e-12!29;UBERON:0003528!1.63e-12!29;UBERON:0001893!1.63e-12!29;UBERON:0004121!2.46e-12!102;UBERON:0000924!2.46e-12!102;UBERON:0006601!2.46e-12!102;UBERON:0002021!6.14e-10!10;UBERON:0000411!6.14e-10!10;UBERON:0001950!6.14e-10!10;UBERON:0007811!1.24e-09!86;UBERON:0000153!1.50e-08!94;UBERON:0002619!3.54e-08!17;UBERON:0000956!6.28e-08!21;UBERON:0001869!6.28e-08!21;UBERON:0000203!6.28e-08!21;UBERON:0002298!4.53e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.00e-27,10;UBERON:0000411,2.00e-27,10;UBERON:0001950,2.00e-27,10;UBERON:0000073,4.36e-23,54;UBERON:0001049,1.91e-18,52;UBERON:0005068,1.91e-18,52;UBERON:0006241,1.91e-18,52;UBERON:0007135,1.91e-18,52;UBERON:0001017,2.42e-18,73;UBERON:0001016,8.95e-18,75;UBERON:0002020,1.41e-16,34;UBERON:0002619,1.04e-15,17;UBERON:0002346,1.74e-14,64;UBERON:0003075,1.74e-14,64;UBERON:0007284,1.74e-14,64;UBERON:0004684,1.08e-13,3;UBERON:0002275,1.08e-13,3;UBERON:0004121,2.11e-13,95;UBERON:0000924,2.11e-13,95;UBERON:0006601,2.11e-13,95;UBERON:0002257,3.83e-13,3;UBERON:0000956,1.64e-12,21;UBERON:0001869,1.64e-12,21;UBERON:0000203,1.64e-12,21;UBERON:0010371,2.28e-12,73;UBERON:0002616,1.34e-11,46;UBERON:0003080,1.95e-11,40;UBERON:0000955,2.62e-11,47;UBERON:0006238,2.62e-11,47;UBERON:0002240,3.58e-11,6;UBERON:0005174,3.58e-11,6;UBERON:0001137,3.58e-11,6;UBERON:0003528,4.05e-11,29;UBERON:0002791,4.05e-11,29;UBERON:0001893,4.05e-11,29;UBERON:0002780,1.01e-09,39;UBERON:0001890,1.01e-09,39;UBERON:0006240,1.01e-09,39;UBERON:0010314,3.01e-09,92;UBERON:0003056,5.31e-09,49;UBERON:0003076,2.12e-08,12;UBERON:0003057,2.12e-08,12;UBERON:0001948,4.37e-08,5;UBERON:0002315,4.37e-08,5;UBERON:0000025,5.19e-08,114;UBERON:0004111,2.71e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.191690942036473,0,2.20231761998777,2.042997409363,3.37934373163736,0.131886287730194,0.548925861614458,0,0.837548997004143,0.56276261003168,3.36156145108982,3.24091444021034,1.99320353118744,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,1.49790639404823,0.457500602818626,0.628271760564322,0.347648640384553,2.04572365864264,0.41557608911912,1.29793010454206,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0,0,0,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.321101179975584,0.937693492737625,0,0.252470927204373,0,0,0.430846795465598,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.532020700926821,0.356737635204141,0.164549020602121,0,0,0,0,0,0.322928853391811,0,0,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,1.84130094602871,0.572895513439397,4.64003592327956,0,2.2661816921691,4.05013500139084,1.80128481289688,2.71885445390523,5.1776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0.476293691283074,0.347652977834566,0,0,0.588795680537589,0.342869252385415,0.70990322463735,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0.789209134313529,0.407412341537585,0,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr12:110797581..110797592,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:110797581..110797592,+ | |||
|description=CAGE_peak_at_chr12:110797581..110797592,+ | |||
|id=chr12:110797581..110797592,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.94e-07!23;CL:0000337!1.94e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.08e-13,3;CL:0002612,3.83e-13,3;CL:0000117,2.07e-08,23;CL:0000337,2.07e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.87e-19!50;UBERON:0006238!1.87e-19!50;UBERON:0002616!9.38e-19!49;UBERON:0001049!2.42e-18!52;UBERON:0005068!2.42e-18!52;UBERON:0006241!2.42e-18!52;UBERON:0007135!2.42e-18!52;UBERON:0000033!6.35e-17!63;UBERON:0001017!7.95e-17!73;UBERON:0005743!7.95e-17!73;UBERON:0000073!5.34e-16!75;UBERON:0001016!5.34e-16!75;UBERON:0002346!1.20e-15!71;UBERON:0003075!1.20e-15!71;UBERON:0007284!1.20e-15!71;UBERON:0002020!5.83e-14!34;UBERON:0003080!8.04e-14!40;UBERON:0003056!1.83e-13!49;UBERON:0002780!5.91e-13!39;UBERON:0001890!5.91e-13!39;UBERON:0006240!5.91e-13!39;UBERON:0002791!1.63e-12!29;UBERON:0003528!1.63e-12!29;UBERON:0001893!1.63e-12!29;UBERON:0004121!2.46e-12!102;UBERON:0000924!2.46e-12!102;UBERON:0006601!2.46e-12!102;UBERON:0002021!6.14e-10!10;UBERON:0000411!6.14e-10!10;UBERON:0001950!6.14e-10!10;UBERON:0007811!1.24e-09!86;UBERON:0000153!1.50e-08!94;UBERON:0002619!3.54e-08!17;UBERON:0000956!6.28e-08!21;UBERON:0001869!6.28e-08!21;UBERON:0000203!6.28e-08!21;UBERON:0002298!4.53e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.00e-27,10;UBERON:0000411,2.00e-27,10;UBERON:0001950,2.00e-27,10;UBERON:0000073,4.36e-23,54;UBERON:0001049,1.91e-18,52;UBERON:0005068,1.91e-18,52;UBERON:0006241,1.91e-18,52;UBERON:0007135,1.91e-18,52;UBERON:0001017,2.42e-18,73;UBERON:0001016,8.95e-18,75;UBERON:0002020,1.41e-16,34;UBERON:0002619,1.04e-15,17;UBERON:0002346,1.74e-14,64;UBERON:0003075,1.74e-14,64;UBERON:0007284,1.74e-14,64;UBERON:0004684,1.08e-13,3;UBERON:0002275,1.08e-13,3;UBERON:0004121,2.11e-13,95;UBERON:0000924,2.11e-13,95;UBERON:0006601,2.11e-13,95;UBERON:0002257,3.83e-13,3;UBERON:0000956,1.64e-12,21;UBERON:0001869,1.64e-12,21;UBERON:0000203,1.64e-12,21;UBERON:0010371,2.28e-12,73;UBERON:0002616,1.34e-11,46;UBERON:0003080,1.95e-11,40;UBERON:0000955,2.62e-11,47;UBERON:0006238,2.62e-11,47;UBERON:0002240,3.58e-11,6;UBERON:0005174,3.58e-11,6;UBERON:0001137,3.58e-11,6;UBERON:0003528,4.05e-11,29;UBERON:0002791,4.05e-11,29;UBERON:0001893,4.05e-11,29;UBERON:0002780,1.01e-09,39;UBERON:0001890,1.01e-09,39;UBERON:0006240,1.01e-09,39;UBERON:0010314,3.01e-09,92;UBERON:0003056,5.31e-09,49;UBERON:0003076,2.12e-08,12;UBERON:0003057,2.12e-08,12;UBERON:0001948,4.37e-08,5;UBERON:0002315,4.37e-08,5;UBERON:0000025,5.19e-08,114;UBERON:0004111,2.71e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.191690942036473,0,2.20231761998777,2.042997409363,3.37934373163736,0.131886287730194,0.548925861614458,0,0.837548997004143,0.56276261003168,3.36156145108982,3.24091444021034,1.99320353118744,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,1.49790639404823,0.457500602818626,0.628271760564322,0.347648640384553,2.04572365864264,0.41557608911912,1.29793010454206,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0,0,0,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.321101179975584,0.937693492737625,0,0.252470927204373,0,0,0.430846795465598,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.532020700926821,0.356737635204141,0.164549020602121,0,0,0,0,0,0.322928853391811,0,0,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,1.84130094602871,0.572895513439397,4.64003592327956,0,2.2661816921691,4.05013500139084,1.80128481289688,2.71885445390523,5.1776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0.476293691283074,0.347652977834566,0,0,0.588795680537589,0.342869252385415,0.70990322463735,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0.789209134313529,0.407412341537585,0,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:110797581..110797592,+ | |||
}} |
Latest revision as of 17:07, 4 August 2015
Short description: | p@chr12:110797581..110797592, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:110797581..110797592, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.08e-13 | 3 |
neuron of the ventral spinal cord | 3.83e-13 | 3 |
CNS neuron (sensu Vertebrata) | 2.07e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.07e-08 | 23 |