FFCP PHASE1:Mm9::chr12:73337679..73337695,-: Difference between revisions
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{{FFCP|EntrezGene=104001|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=-6bp_to_ENSMUST00000144181_5end|description=CAGE_peak_1_at_Rtn1_5end|id=chr12:73337679..73337695,-|ontology_enrichment_celltype=CL:0000221!1.27e-15!44;CL:0000133!1.27e-15!44;CL:0002319!1.55e-15!43;CL:0000540!4.37e-15!33;CL:0000047!4.37e-15!33;CL:0000031!4.37e-15!33;CL:0000404!4.37e-15!33;CL:0000117!1.63e-14!23;CL:0000337!1.63e-14!23;CL:0000055!7.24e-11!50;CL:0000393!1.45e-10!39;CL:0000211!1.45e-10!39|ontology_enrichment_celltype_v019_2=CL:0000221,2.12e-16,44;CL:0000133,2.12e-16,44;CL:0002319,2.60e-16,43;CL:0000540,7.79e-16,33;CL:0000047,7.79e-16,33;CL:0000031,7.79e-16,33;CL:0000404,7.79e-16,33;CL:0000117,3.13e-15,23;CL:0000337,3.13e-15,23;CL:0000393,9.01e-11,39;CL:0000211,9.01e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.02e-32!73;UBERON:0005743!8.02e-32!73;UBERON:0000073!8.61e-32!75;UBERON:0001016!8.61e-32!75;UBERON:0004121!4.08e-29!102;UBERON:0000924!4.08e-29!102;UBERON:0006601!4.08e-29!102;UBERON:0002346!5.34e-29!71;UBERON:0003075!5.34e-29!71;UBERON:0007284!5.34e-29!71;UBERON:0001049!4.64e-25!52;UBERON:0005068!4.64e-25!52;UBERON:0006241!4.64e-25!52;UBERON:0007135!4.64e-25!52;UBERON:0000033!3.40e-24!63;UBERON:0000955!3.56e-23!50;UBERON:0006238!3.56e-23!50;UBERON:0002616!1.13e-22!49;UBERON:0003056!1.09e-20!49;UBERON:0002020!3.20e-20!34;UBERON:0003080!1.17e-18!40;UBERON:0002780!5.21e-18!39;UBERON:0001890!5.21e-18!39;UBERON:0006240!5.21e-18!39;UBERON:0002791!7.43e-17!29;UBERON:0003528!7.43e-17!29;UBERON:0001893!7.43e-17!29;UBERON:0000956!7.50e-12!21;UBERON:0001869!7.50e-12!21;UBERON:0000203!7.50e-12!21;UBERON:0007811!9.16e-11!86;UBERON:0002619!1.02e-09!17;UBERON:0000153!3.26e-09!94;UBERON:0002021!1.66e-07!10;UBERON:0000411!1.66e-07!10;UBERON:0001950!1.66e-07!10;UBERON:0003076!5.69e-07!12;UBERON:0003057!5.69e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-33,73;UBERON:0001016,1.79e-33,75;UBERON:0002346,2.25e-29,64;UBERON:0003075,2.25e-29,64;UBERON:0007284,2.25e-29,64;UBERON:0004121,1.74e-28,95;UBERON:0000924,1.74e-28,95;UBERON:0006601,1.74e-28,95;UBERON:0000073,1.38e-27,54;UBERON:0001049,2.29e-26,52;UBERON:0005068,2.29e-26,52;UBERON:0006241,2.29e-26,52;UBERON:0007135,2.29e-26,52;UBERON:0010314,1.15e-24,92;UBERON:0010371,2.26e-23,73;UBERON:0000955,1.40e-22,47;UBERON:0006238,1.40e-22,47;UBERON:0002616,4.65e-22,46;UBERON:0003056,9.46e-22,49;UBERON:0002020,2.95e-21,34;UBERON:0003080,1.32e-19,40;UBERON:0002780,6.38e-19,39;UBERON:0001890,6.38e-19,39;UBERON:0006240,6.38e-19,39;UBERON:0003528,1.06e-17,29;UBERON:0002791,1.06e-17,29;UBERON:0001893,1.06e-17,29;UBERON:0000956,2.02e-12,21;UBERON:0001869,2.02e-12,21;UBERON:0000203,2.02e-12,21;UBERON:0002619,3.61e-10,17;UBERON:0002021,7.75e-08,10;UBERON:0000411,7.75e-08,10;UBERON:0001950,7.75e-08,10;UBERON:0003076,2.84e-07,12;UBERON:0003057,2.84e-07,12|phase1_expression=14.8938427807458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.9201732601928,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,16.4302182313088,15.6978112593922,7.46933021297204,3.69416808241138,9.09911740564856,12.9377307928474,0,0,0,0.514518872071894,0.85960031981627,0,479.085379315528,709.905894183068,426.568534559659,2.37191172448392,1.77858959222228,0,2.96659908770092,0,35.9520132622086,66.4697668206289,260.053547669662,296.338034638061,286.883247283285,465.325453593796,475.088231586921,298.142605289198,243.639187328357,231.643134225725,282.997814168429,297.383810400402,308.288312245281,537.56850878827,539.045196105398,503.20231595783,364.054630697801,334.84375296885,365.035013938799,459.620593338922,424.552352142925,529.93362448133,4.01348824665875,10.202160614416,0,0,0,2.15881276655127,0,0,21.2071074398945,0,0,0,12.9575946194546,0,0,0,0,0,0,11.9893073705013,0,9.20341262201914,23.7674897669606,34.404599049272,29.7493991460315,35.5705431704189,36.2173217977971,3.76999773989026,0.247194967734374,1.01219549843938,0,0.323533699894818,0.220841518460394,0,1.86391761218122,209.631050660268,249.241581108012,1.78819938646014,0,0,0,449.072336935658,264.435348429166,629.276995381225,532.771541389327,650.540123448361,347.213822459025,383.213863366044,0.611036183101898,0,0,9.04899980311838,7.28674480591141,46.2103229911281,58.1600679271278,55.7607825992146,83.3447114603766,68.7970677929643,68.402258928602,35.9597685327232,1.72454394346274,1.70195472151037,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,3.72826390563903,3.04883877975425,3.96136535214233,2.3674473558521,1.77087808572663,1.85120535464854,1.62773761325285,1.87791380979733,1.16765342367169,0.987359099480883,2.95501435342371,1.86458261955468,1.60819986167866,1.53685080703735,2.01309628140558,466.633395863798,614.134726679569,0,1.58670339998127,3.41261200856374,4.87697010906921,12.7578786708872,10.8909103296605,10.0070119730192,13.5060194539917,3.32170343081158,13.3406153326449,8.79673230800943,9.9478236020575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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104001 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENSMUST00000144181_5end | |||
|cluster_id=chr12:73337679..73337695,- | |||
|description=CAGE_peak_1_at_Rtn1_5end | |||
|id=chr12:73337679..73337695,- | |||
|ontology_enrichment_celltype=CL:0000221!1.27e-15!44;CL:0000133!1.27e-15!44;CL:0002319!1.55e-15!43;CL:0000540!4.37e-15!33;CL:0000047!4.37e-15!33;CL:0000031!4.37e-15!33;CL:0000404!4.37e-15!33;CL:0000117!1.63e-14!23;CL:0000337!1.63e-14!23;CL:0000055!7.24e-11!50;CL:0000393!1.45e-10!39;CL:0000211!1.45e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.12e-16,44;CL:0000133,2.12e-16,44;CL:0002319,2.60e-16,43;CL:0000540,7.79e-16,33;CL:0000047,7.79e-16,33;CL:0000031,7.79e-16,33;CL:0000404,7.79e-16,33;CL:0000117,3.13e-15,23;CL:0000337,3.13e-15,23;CL:0000393,9.01e-11,39;CL:0000211,9.01e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.02e-32!73;UBERON:0005743!8.02e-32!73;UBERON:0000073!8.61e-32!75;UBERON:0001016!8.61e-32!75;UBERON:0004121!4.08e-29!102;UBERON:0000924!4.08e-29!102;UBERON:0006601!4.08e-29!102;UBERON:0002346!5.34e-29!71;UBERON:0003075!5.34e-29!71;UBERON:0007284!5.34e-29!71;UBERON:0001049!4.64e-25!52;UBERON:0005068!4.64e-25!52;UBERON:0006241!4.64e-25!52;UBERON:0007135!4.64e-25!52;UBERON:0000033!3.40e-24!63;UBERON:0000955!3.56e-23!50;UBERON:0006238!3.56e-23!50;UBERON:0002616!1.13e-22!49;UBERON:0003056!1.09e-20!49;UBERON:0002020!3.20e-20!34;UBERON:0003080!1.17e-18!40;UBERON:0002780!5.21e-18!39;UBERON:0001890!5.21e-18!39;UBERON:0006240!5.21e-18!39;UBERON:0002791!7.43e-17!29;UBERON:0003528!7.43e-17!29;UBERON:0001893!7.43e-17!29;UBERON:0000956!7.50e-12!21;UBERON:0001869!7.50e-12!21;UBERON:0000203!7.50e-12!21;UBERON:0007811!9.16e-11!86;UBERON:0002619!1.02e-09!17;UBERON:0000153!3.26e-09!94;UBERON:0002021!1.66e-07!10;UBERON:0000411!1.66e-07!10;UBERON:0001950!1.66e-07!10;UBERON:0003076!5.69e-07!12;UBERON:0003057!5.69e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-33,73;UBERON:0001016,1.79e-33,75;UBERON:0002346,2.25e-29,64;UBERON:0003075,2.25e-29,64;UBERON:0007284,2.25e-29,64;UBERON:0004121,1.74e-28,95;UBERON:0000924,1.74e-28,95;UBERON:0006601,1.74e-28,95;UBERON:0000073,1.38e-27,54;UBERON:0001049,2.29e-26,52;UBERON:0005068,2.29e-26,52;UBERON:0006241,2.29e-26,52;UBERON:0007135,2.29e-26,52;UBERON:0010314,1.15e-24,92;UBERON:0010371,2.26e-23,73;UBERON:0000955,1.40e-22,47;UBERON:0006238,1.40e-22,47;UBERON:0002616,4.65e-22,46;UBERON:0003056,9.46e-22,49;UBERON:0002020,2.95e-21,34;UBERON:0003080,1.32e-19,40;UBERON:0002780,6.38e-19,39;UBERON:0001890,6.38e-19,39;UBERON:0006240,6.38e-19,39;UBERON:0003528,1.06e-17,29;UBERON:0002791,1.06e-17,29;UBERON:0001893,1.06e-17,29;UBERON:0000956,2.02e-12,21;UBERON:0001869,2.02e-12,21;UBERON:0000203,2.02e-12,21;UBERON:0002619,3.61e-10,17;UBERON:0002021,7.75e-08,10;UBERON:0000411,7.75e-08,10;UBERON:0001950,7.75e-08,10;UBERON:0003076,2.84e-07,12;UBERON:0003057,2.84e-07,12 | |||
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|short_description=p1@Rtn1 | |||
}} |
Latest revision as of 18:14, 26 September 2015
Short description: | p1@Rtn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rtn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -6bp_to_ENSMUST00000144181_5end |
EntrezGene: | Rtn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.12e-16 | 44 |
neurectodermal cell | 2.12e-16 | 44 |
neural cell | 2.60e-16 | 43 |
neuron | 7.79e-16 | 33 |
neuronal stem cell | 7.79e-16 | 33 |
neuroblast | 7.79e-16 | 33 |
electrically signaling cell | 7.79e-16 | 33 |
CNS neuron (sensu Vertebrata) | 3.13e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.13e-15 | 23 |
electrically responsive cell | 9.01e-11 | 39 |
electrically active cell | 9.01e-11 | 39 |