FFCP PHASE1:Mm9::chr12:99670376..99670380,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=941|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:99670376..99670380,-|id=chr12:99670376..99670380,-|ontology_enrichment_celltype=CL:0000117!7.26e-18!23;CL:0000337!7.26e-18!23;CL:0000540!8.70e-11!33;CL:0000047!8.70e-11!33;CL:0000031!8.70e-11!33;CL:0000404!8.70e-11!33;CL:0000221!1.62e-09!44;CL:0000133!1.62e-09!44;CL:0002319!6.63e-09!43;CL:0000393!2.45e-08!39;CL:0000211!2.45e-08!39;CL:0000055!6.65e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002613,2.49e-20,3;CL:0000120,3.11e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.32e-20!52;UBERON:0005068!4.32e-20!52;UBERON:0006241!4.32e-20!52;UBERON:0007135!4.32e-20!52;UBERON:0002616!7.95e-18!49;UBERON:0000073!1.10e-17!75;UBERON:0001016!1.10e-17!75;UBERON:0001017!2.06e-17!73;UBERON:0005743!2.06e-17!73;UBERON:0000955!2.70e-17!50;UBERON:0006238!2.70e-17!50;UBERON:0002020!5.51e-17!34;UBERON:0002346!2.84e-16!71;UBERON:0003075!2.84e-16!71;UBERON:0007284!2.84e-16!71;UBERON:0000033!4.72e-15!63;UBERON:0002791!7.36e-15!29;UBERON:0003528!7.36e-15!29;UBERON:0001893!7.36e-15!29;UBERON:0004121!2.88e-14!102;UBERON:0000924!2.88e-14!102;UBERON:0006601!2.88e-14!102;UBERON:0003080!1.11e-12!40;UBERON:0002780!8.36e-12!39;UBERON:0001890!8.36e-12!39;UBERON:0006240!8.36e-12!39;UBERON:0003056!3.78e-11!49;UBERON:0007811!4.65e-10!86;UBERON:0002420!5.28e-09!8;UBERON:0007245!5.28e-09!8;UBERON:0010009!5.28e-09!8;UBERON:0010011!5.28e-09!8;UBERON:0000454!5.28e-09!8;UBERON:0003076!1.17e-08!12;UBERON:0003057!1.17e-08!12;UBERON:0000153!1.93e-08!94;UBERON:0000956!4.56e-08!21;UBERON:0001869!4.56e-08!21;UBERON:0000203!4.56e-08!21;UBERON:0002298!7.12e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.24e-12,5;UBERON:0002435,1.24e-12,5;UBERON:0000204,1.24e-12,5;UBERON:0010082,1.24e-12,5;UBERON:0002420,2.89e-08,8;UBERON:0007245,2.89e-08,8;UBERON:0010009,2.89e-08,8;UBERON:0010011,2.89e-08,8;UBERON:0000454,2.89e-08,8;UBERON:0001017,1.48e-07,73;UBERON:0002020,2.09e-07,34;UBERON:0001016,2.31e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.622137673850866,1.35005938331691,0.630974884054146,0,0.441737081903227,0.244981598429908,0.670918297127655,0,0,0.127687338085188,0.153606533256243,1.05509030184155,1.46380229763855,0,0.558365998002762,0.56276261003168,0.15279824777681,0,0.711858403995515,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0.510914110417183,0,0,0,0.299581278809645,0.457500602818626,0.753926112677186,0.173824320192276,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.68741272937475,0.685082519770642,0,0,0.900642406448441,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.34461281373368,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr12:99670376..99670380,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=941 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:99670376..99670380,- | |||
|description=CAGE_peak_at_chr12:99670376..99670380,- | |||
|id=chr12:99670376..99670380,- | |||
|ontology_enrichment_celltype=CL:0000117!7.26e-18!23;CL:0000337!7.26e-18!23;CL:0000540!8.70e-11!33;CL:0000047!8.70e-11!33;CL:0000031!8.70e-11!33;CL:0000404!8.70e-11!33;CL:0000221!1.62e-09!44;CL:0000133!1.62e-09!44;CL:0002319!6.63e-09!43;CL:0000393!2.45e-08!39;CL:0000211!2.45e-08!39;CL:0000055!6.65e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002613,2.49e-20,3;CL:0000120,3.11e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.32e-20!52;UBERON:0005068!4.32e-20!52;UBERON:0006241!4.32e-20!52;UBERON:0007135!4.32e-20!52;UBERON:0002616!7.95e-18!49;UBERON:0000073!1.10e-17!75;UBERON:0001016!1.10e-17!75;UBERON:0001017!2.06e-17!73;UBERON:0005743!2.06e-17!73;UBERON:0000955!2.70e-17!50;UBERON:0006238!2.70e-17!50;UBERON:0002020!5.51e-17!34;UBERON:0002346!2.84e-16!71;UBERON:0003075!2.84e-16!71;UBERON:0007284!2.84e-16!71;UBERON:0000033!4.72e-15!63;UBERON:0002791!7.36e-15!29;UBERON:0003528!7.36e-15!29;UBERON:0001893!7.36e-15!29;UBERON:0004121!2.88e-14!102;UBERON:0000924!2.88e-14!102;UBERON:0006601!2.88e-14!102;UBERON:0003080!1.11e-12!40;UBERON:0002780!8.36e-12!39;UBERON:0001890!8.36e-12!39;UBERON:0006240!8.36e-12!39;UBERON:0003056!3.78e-11!49;UBERON:0007811!4.65e-10!86;UBERON:0002420!5.28e-09!8;UBERON:0007245!5.28e-09!8;UBERON:0010009!5.28e-09!8;UBERON:0010011!5.28e-09!8;UBERON:0000454!5.28e-09!8;UBERON:0003076!1.17e-08!12;UBERON:0003057!1.17e-08!12;UBERON:0000153!1.93e-08!94;UBERON:0000956!4.56e-08!21;UBERON:0001869!4.56e-08!21;UBERON:0000203!4.56e-08!21;UBERON:0002298!7.12e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.24e-12,5;UBERON:0002435,1.24e-12,5;UBERON:0000204,1.24e-12,5;UBERON:0010082,1.24e-12,5;UBERON:0002420,2.89e-08,8;UBERON:0007245,2.89e-08,8;UBERON:0010009,2.89e-08,8;UBERON:0010011,2.89e-08,8;UBERON:0000454,2.89e-08,8;UBERON:0001017,1.48e-07,73;UBERON:0002020,2.09e-07,34;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.622137673850866,1.35005938331691,0.630974884054146,0,0.441737081903227,0.244981598429908,0.670918297127655,0,0,0.127687338085188,0.153606533256243,1.05509030184155,1.46380229763855,0,0.558365998002762,0.56276261003168,0.15279824777681,0,0.711858403995515,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0.510914110417183,0,0,0,0.299581278809645,0.457500602818626,0.753926112677186,0.173824320192276,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.68741272937475,0.685082519770642,0,0,0.900642406448441,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.34461281373368,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr12:99670376..99670380,- | |||
}} |
Latest revision as of 12:02, 5 August 2015
Short description: | p@chr12:99670376..99670380, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:99670376..99670380, - |
Coexpression cluster: | MCL_coexpression_mm9:941 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.18e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.18e-23 | 23 |
striatum neuron | 2.49e-20 | 3 |
granule cell | 3.11e-20 | 3 |
neuron | 2.90e-16 | 33 |
neuronal stem cell | 2.90e-16 | 33 |
neuroblast | 2.90e-16 | 33 |
electrically signaling cell | 2.90e-16 | 33 |
electrically responsive cell | 7.80e-14 | 39 |
electrically active cell | 7.80e-14 | 39 |
neural cell | 1.38e-12 | 43 |
ectodermal cell | 2.60e-12 | 44 |
neurectodermal cell | 2.60e-12 | 44 |
embryonic cell | 7.20e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.24e-12 | 5 |
striatum | 1.24e-12 | 5 |
ventral part of telencephalon | 1.24e-12 | 5 |
future corpus striatum | 1.24e-12 | 5 |
basal ganglion | 2.89e-08 | 8 |
nuclear complex of neuraxis | 2.89e-08 | 8 |
aggregate regional part of brain | 2.89e-08 | 8 |
collection of basal ganglia | 2.89e-08 | 8 |
cerebral subcortex | 2.89e-08 | 8 |
central nervous system | 1.48e-07 | 73 |
gray matter | 2.09e-07 | 34 |
nervous system | 2.31e-07 | 75 |