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FFCP PHASE1:Mm9::chr13:29045274..29045293,-: Difference between revisions

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{{FFCP|EntrezGene=20677|HGNC=|MCL_coexpression_id=76|UniProt=Q06831|association_with_transcript=257bp_to_NM_009238,uc007pyk.1_5end|description=CAGE_peak_6_at_Sox4_5end|id=chr13:29045274..29045293,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,2.50e-20,6;CL:0002608,8.32e-11,3;CL:0000117,4.98e-08,23;CL:0000337,4.98e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!8.39e-12!21;UBERON:0001869!8.39e-12!21;UBERON:0000203!8.39e-12!21;UBERON:0002791!5.47e-11!29;UBERON:0003528!5.47e-11!29;UBERON:0001893!5.47e-11!29;UBERON:0002619!1.03e-09!17;UBERON:0002020!3.04e-09!34;UBERON:0002780!2.15e-08!39;UBERON:0001890!2.15e-08!39;UBERON:0006240!2.15e-08!39;UBERON:0003080!4.01e-08!40|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.22e-25,29;UBERON:0002791,2.22e-25,29;UBERON:0001893,2.22e-25,29;UBERON:0000956,6.61e-24,21;UBERON:0001869,6.61e-24,21;UBERON:0000203,6.61e-24,21;UBERON:0002020,3.76e-21,34;UBERON:0002780,5.24e-18,39;UBERON:0001890,5.24e-18,39;UBERON:0006240,5.24e-18,39;UBERON:0003080,1.80e-17,40;UBERON:0002619,3.40e-17,17;UBERON:0002616,9.41e-15,46;UBERON:0000955,2.29e-14,47;UBERON:0006238,2.29e-14,47;UBERON:0003056,1.21e-13,49;UBERON:0001049,1.16e-12,52;UBERON:0005068,1.16e-12,52;UBERON:0006241,1.16e-12,52;UBERON:0007135,1.16e-12,52;UBERON:0000073,4.55e-12,54;UBERON:0001954,9.40e-12,7;UBERON:0003022,9.40e-12,7;UBERON:0002421,9.40e-12,7;UBERON:0000349,9.40e-12,7;UBERON:0002600,9.40e-12,7;UBERON:0010371,1.65e-10,73;UBERON:0002346,1.16e-09,64;UBERON:0003075,1.16e-09,64;UBERON:0007284,1.16e-09,64;UBERON:0001017,3.01e-09,73;UBERON:0001016,6.59e-09,75;UBERON:0004121,3.18e-08,95;UBERON:0000924,3.18e-08,95;UBERON:0006601,3.18e-08,95;UBERON:0002021,1.35e-07,10;UBERON:0000411,1.35e-07,10;UBERON:0001950,1.35e-07,10|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0,0.233612640595526,0,0.281577444303333,0.70219357896598,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0.0992909512008853,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.755380907853464,1.31790010585369,0.734187008646726,0,0.872100625521786,1.09843091367236,0.58328969722285,0.279972843250725,0,0.167782606057736,0.725362142011344,0.336093799142464,0.771778308107841,0.573066879877513,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,1.15265491596466,4.76972216618997,9.85543349821342,8.83364837675805,0,0.220868540951614,2.69479758272899,2.49198224647415,1.83843757322004,0,0.255374676170375,0.153606533256243,1.18697658957174,1.09785172322892,0,0,0.56276261003168,0,0,0.142371680799103,0.745597783301202,0.908714319998209,0.453429360640713,0.289864488701678,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0,0,0,0.173485326766136,0,1.15307748628029,0.301445281105245,0.705532242814229,0,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0.479260498023681,0,0.381210681219194,0.149790639404823,0.457500602818626,1.7591609295801,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0.373220911830279,0.252722758433675,0,0.260240885925407,0.229902104433473,0,0,0.476255494059295,0.2562274405697,0.281105173679186,0,0,0.567318240503458,0,0.219195732427575,0.278047249225598,0,0.823128545631774,0.199034266818493,0.702213187313235,0,0.568326998791185,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.462801338662135,0,0,0.467061369468678,0.329119699826961,0.656669856316381,0.486412857275134,0,0.219550115291051,0.536825675041487,0.630869845692382,10.3933658503077,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0.432276099749388,0,0,0.228497025219458,0,0,0.193952487167626,0.420814919341911,0.316182685621286,0,0.784993639206874,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0.509235257325564,0.234690248288502,0.167506257441816,0,0.390267295715598,0.945810864637146,0,0,0.491589944147214,0.518054945597687,1.3018415272336,1.50791283939272,0,0.491764273019036,0,0,0,0.983609672260053,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.890328018336276,0.325773918707152,0,0,0.242780636154981,0.604647113929502,0,0,0,0.775284879504663,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0.661585194164886,0.32977250588296,0.322928853391811,1.02531972377865,1.19372344003136,0.656563598980245,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.339956859987711,0.979660166265606,0.414599921413271,0,0,0.203319467126849,0,0.209088296014469,0.87345025498471,0.134864346384821,0.330613822901344,0.523511883968059,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.39061315453185,0.209718688851422,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0,0.403865799792591,0.228620419965,0.302478555410522,0.0974578807397524,0.384847366561318,0.467507608726276,0,0,0,0.167884616364078,0.579568782096571,0.187682475451182,0.73260649706906,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,2.05524755931193,2.2661816921691,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,0.207574695168353,0,0.170733605754134,0.243106717068294,0.838452650511929,0.735374033800057,0.44449345560323,0.206035057238894,1.28367683836726,0.505394423527595,0.25347929989024,0.188626341386076,0.749132059759059,0.640251524048693,0.459483751644906,0,0.695305955669133,0.38581844092741,0,0.735994600671987,0.685738504770831,0.532427418478012,0.953744759789284,0.290692833264657,0.470546902076653,0.676916863133412,0.182927972872773,0.263069711437843,1.22223702461276,0.561142271657738,0.474540072496697,0.591026894253381,0,1.39443157067369,0.385813221962283,1.24905288968973,0.935726433781634,0.429742108096597,0.765153328275374,0.220591419119515,0.927471342481686|short_description=p6@Sox4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20677
|HGNC=
|MCL_coexpression_id=76
|TSSclassifier=NA
|UniProt=Q06831
|association_with_transcript=257bp_to_NM_009238,uc007pyk.1_5end
|cluster_id=chr13:29045274..29045293,-
|description=CAGE_peak_6_at_Sox4_5end
|id=chr13:29045274..29045293,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002609,2.50e-20,6;CL:0002608,8.32e-11,3;CL:0000117,4.98e-08,23;CL:0000337,4.98e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000956!8.39e-12!21;UBERON:0001869!8.39e-12!21;UBERON:0000203!8.39e-12!21;UBERON:0002791!5.47e-11!29;UBERON:0003528!5.47e-11!29;UBERON:0001893!5.47e-11!29;UBERON:0002619!1.03e-09!17;UBERON:0002020!3.04e-09!34;UBERON:0002780!2.15e-08!39;UBERON:0001890!2.15e-08!39;UBERON:0006240!2.15e-08!39;UBERON:0003080!4.01e-08!40
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.22e-25,29;UBERON:0002791,2.22e-25,29;UBERON:0001893,2.22e-25,29;UBERON:0000956,6.61e-24,21;UBERON:0001869,6.61e-24,21;UBERON:0000203,6.61e-24,21;UBERON:0002020,3.76e-21,34;UBERON:0002780,5.24e-18,39;UBERON:0001890,5.24e-18,39;UBERON:0006240,5.24e-18,39;UBERON:0003080,1.80e-17,40;UBERON:0002619,3.40e-17,17;UBERON:0002616,9.41e-15,46;UBERON:0000955,2.29e-14,47;UBERON:0006238,2.29e-14,47;UBERON:0003056,1.21e-13,49;UBERON:0001049,1.16e-12,52;UBERON:0005068,1.16e-12,52;UBERON:0006241,1.16e-12,52;UBERON:0007135,1.16e-12,52;UBERON:0000073,4.55e-12,54;UBERON:0001954,9.40e-12,7;UBERON:0003022,9.40e-12,7;UBERON:0002421,9.40e-12,7;UBERON:0000349,9.40e-12,7;UBERON:0002600,9.40e-12,7;UBERON:0010371,1.65e-10,73;UBERON:0002346,1.16e-09,64;UBERON:0003075,1.16e-09,64;UBERON:0007284,1.16e-09,64;UBERON:0001017,3.01e-09,73;UBERON:0001016,6.59e-09,75;UBERON:0004121,3.18e-08,95;UBERON:0000924,3.18e-08,95;UBERON:0006601,3.18e-08,95;UBERON:0002021,1.35e-07,10;UBERON:0000411,1.35e-07,10;UBERON:0001950,1.35e-07,10
|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0,0.233612640595526,0,0.281577444303333,0.70219357896598,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0.0992909512008853,0.522399578277871,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.755380907853464,1.31790010585369,0.734187008646726,0,0.872100625521786,1.09843091367236,0.58328969722285,0.279972843250725,0,0.167782606057736,0.725362142011344,0.336093799142464,0.771778308107841,0.573066879877513,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,1.15265491596466,4.76972216618997,9.85543349821342,8.83364837675805,0,0.220868540951614,2.69479758272899,2.49198224647415,1.83843757322004,0,0.255374676170375,0.153606533256243,1.18697658957174,1.09785172322892,0,0,0.56276261003168,0,0,0.142371680799103,0.745597783301202,0.908714319998209,0.453429360640713,0.289864488701678,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0,0,0,0.173485326766136,0,1.15307748628029,0.301445281105245,0.705532242814229,0,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0.479260498023681,0,0.381210681219194,0.149790639404823,0.457500602818626,1.7591609295801,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0.373220911830279,0.252722758433675,0,0.260240885925407,0.229902104433473,0,0,0.476255494059295,0.2562274405697,0.281105173679186,0,0,0.567318240503458,0,0.219195732427575,0.278047249225598,0,0.823128545631774,0.199034266818493,0.702213187313235,0,0.568326998791185,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.462801338662135,0,0,0.467061369468678,0.329119699826961,0.656669856316381,0.486412857275134,0,0.219550115291051,0.536825675041487,0.630869845692382,10.3933658503077,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0.432276099749388,0,0,0.228497025219458,0,0,0.193952487167626,0.420814919341911,0.316182685621286,0,0.784993639206874,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0.509235257325564,0.234690248288502,0.167506257441816,0,0.390267295715598,0.945810864637146,0,0,0.491589944147214,0.518054945597687,1.3018415272336,1.50791283939272,0,0.491764273019036,0,0,0,0.983609672260053,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.890328018336276,0.325773918707152,0,0,0.242780636154981,0.604647113929502,0,0,0,0.775284879504663,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0.661585194164886,0.32977250588296,0.322928853391811,1.02531972377865,1.19372344003136,0.656563598980245,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.339956859987711,0.979660166265606,0.414599921413271,0,0,0.203319467126849,0,0.209088296014469,0.87345025498471,0.134864346384821,0.330613822901344,0.523511883968059,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.39061315453185,0.209718688851422,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0,0.403865799792591,0.228620419965,0.302478555410522,0.0974578807397524,0.384847366561318,0.467507608726276,0,0,0,0.167884616364078,0.579568782096571,0.187682475451182,0.73260649706906,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,2.05524755931193,2.2661816921691,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,0.207574695168353,0,0.170733605754134,0.243106717068294,0.838452650511929,0.735374033800057,0.44449345560323,0.206035057238894,1.28367683836726,0.505394423527595,0.25347929989024,0.188626341386076,0.749132059759059,0.640251524048693,0.459483751644906,0,0.695305955669133,0.38581844092741,0,0.735994600671987,0.685738504770831,0.532427418478012,0.953744759789284,0.290692833264657,0.470546902076653,0.676916863133412,0.182927972872773,0.263069711437843,1.22223702461276,0.561142271657738,0.474540072496697,0.591026894253381,0,1.39443157067369,0.385813221962283,1.24905288968973,0.935726433781634,0.429742108096597,0.765153328275374,0.220591419119515,0.927471342481686
|short_description=p6@Sox4
}}

Latest revision as of 11:43, 1 October 2015

Short description:p6@Sox4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Sox4_5end
Coexpression cluster:MCL_coexpression_mm9:76
Association with transcript: 257bp_to_NM_009238, uc007pyk.1_5end
EntrezGene:Sox4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p6@Sox4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G110.39
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of cerebral cortex2.50e-206
hippocampal neuron8.32e-113
CNS neuron (sensu Vertebrata)4.98e-0823
neuroblast (sensu Vertebrata)4.98e-0823

Uber anatomy
Ontology termp-valuen
brain grey matter2.22e-2529
regional part of telencephalon2.22e-2529
telencephalon2.22e-2529
cerebral cortex6.61e-2421
cerebral hemisphere6.61e-2421
pallium6.61e-2421
gray matter3.76e-2134
regional part of forebrain5.24e-1839
forebrain5.24e-1839
future forebrain5.24e-1839
anterior neural tube1.80e-1740
regional part of cerebral cortex3.40e-1717
regional part of brain9.41e-1546
brain2.29e-1447
future brain2.29e-1447
pre-chordal neural plate1.21e-1349
neural tube1.16e-1252
neural rod1.16e-1252
future spinal cord1.16e-1252
neural keel1.16e-1252
regional part of nervous system4.55e-1254
Ammon's horn9.40e-127
lobe parts of cerebral cortex9.40e-127
hippocampal formation9.40e-127
limbic system9.40e-127
limbic lobe9.40e-127
ecto-epithelium1.65e-1073
neurectoderm1.16e-0964
neural plate1.16e-0964
presumptive neural plate1.16e-0964
central nervous system3.01e-0973
nervous system6.59e-0975
ectoderm-derived structure3.18e-0895
ectoderm3.18e-0895
presumptive ectoderm3.18e-0895
occipital lobe1.35e-0710
visual cortex1.35e-0710
neocortex1.35e-0710
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