FFCP PHASE1:Mm9::chr16:59638950..59639017,-: Difference between revisions
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{{FFCP|EntrezGene=56297|HGNC=|MCL_coexpression_id=463|UniProt=O88848,D3Z067,E9PZG3|association_with_transcript=0bp_to_ENSMUST00000023405,ENSMUST00000149797,ENSMUST00000172185_5end|description=CAGE_peak_1_at_Arl6_5end|id=chr16:59638950..59639017,-|ontology_enrichment_celltype=CL:0000055!6.66e-11!50;CL:0000221!1.06e-10!44;CL:0000133!1.06e-10!44;CL:0002319!2.57e-10!43;CL:0000393!3.65e-10!39;CL:0000211!3.65e-10!39;CL:0000540!5.22e-09!33;CL:0000047!5.22e-09!33;CL:0000031!5.22e-09!33;CL:0000404!5.22e-09!33;CL:0000117!5.09e-08!23;CL:0000337!5.09e-08!23|ontology_enrichment_celltype_v019_2=CL:0000221,1.06e-10,44;CL:0000133,1.06e-10,44;CL:0002319,2.57e-10,43;CL:0000393,3.64e-10,39;CL:0000211,3.64e-10,39;CL:0000540,5.21e-09,33;CL:0000047,5.21e-09,33;CL:0000031,5.21e-09,33;CL:0000404,5.21e-09,33;CL:0000117,5.08e-08,23;CL:0000337,5.08e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.17e-27!75;UBERON:0001016!1.17e-27!75;UBERON:0001017!6.46e-27!73;UBERON:0005743!6.46e-27!73;UBERON:0000033!4.32e-26!63;UBERON:0004121!5.63e-25!102;UBERON:0000924!5.63e-25!102;UBERON:0006601!5.63e-25!102;UBERON:0002346!8.37e-25!71;UBERON:0003075!8.37e-25!71;UBERON:0007284!8.37e-25!71;UBERON:0001049!1.24e-22!52;UBERON:0005068!1.24e-22!52;UBERON:0006241!1.24e-22!52;UBERON:0007135!1.24e-22!52;UBERON:0000955!3.45e-22!50;UBERON:0006238!3.45e-22!50;UBERON:0003056!6.89e-22!49;UBERON:0002616!1.29e-21!49;UBERON:0003080!8.87e-18!40;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002020!2.47e-14!34;UBERON:0002791!1.03e-12!29;UBERON:0003528!1.03e-12!29;UBERON:0001893!1.03e-12!29;UBERON:0000153!1.89e-12!94;UBERON:0007811!2.69e-12!86;UBERON:0004111!3.49e-12!122;UBERON:0000025!5.54e-12!114;UBERON:0000956!7.23e-09!21;UBERON:0001869!7.23e-09!21;UBERON:0000203!7.23e-09!21;UBERON:0002619!3.84e-08!17;UBERON:0002021!4.34e-07!10;UBERON:0000411!4.34e-07!10;UBERON:0001950!4.34e-07!10;UBERON:0000475!5.15e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.16e-27,75;UBERON:0002346,1.58e-27,64;UBERON:0003075,1.58e-27,64;UBERON:0007284,1.58e-27,64;UBERON:0001017,6.42e-27,73;UBERON:0004121,9.72e-27,95;UBERON:0000924,9.72e-27,95;UBERON:0006601,9.72e-27,95;UBERON:0010314,6.12e-25,92;UBERON:0010371,3.34e-24,73;UBERON:0000073,1.90e-23,54;UBERON:0001049,1.23e-22,52;UBERON:0005068,1.23e-22,52;UBERON:0006241,1.23e-22,52;UBERON:0007135,1.23e-22,52;UBERON:0003056,6.86e-22,49;UBERON:0000955,8.53e-21,47;UBERON:0006238,8.53e-21,47;UBERON:0002616,3.13e-20,46;UBERON:0003080,8.84e-18,40;UBERON:0002780,4.27e-17,39;UBERON:0001890,4.27e-17,39;UBERON:0006240,4.27e-17,39;UBERON:0002020,2.46e-14,34;UBERON:0003528,1.02e-12,29;UBERON:0002791,1.02e-12,29;UBERON:0001893,1.02e-12,29;UBERON:0004111,3.48e-12,122;UBERON:0000025,5.53e-12,114;UBERON:0000956,7.22e-09,21;UBERON:0001869,7.22e-09,21;UBERON:0000203,7.22e-09,21;UBERON:0002619,3.84e-08,17;UBERON:0002021,4.34e-07,10;UBERON:0000411,4.34e-07,10;UBERON:0001950,4.34e-07,10|phase1_expression=34.9124486688451,0.348975407639361,1.81999695755814,0,0,1.17515490338323,2.56973904655078,0.774739940649458,0,0,0.513653904676515,0.638177271962691,0.684802919724823,0.34968160967599,2.33176833270964,2.02475267389826,2.09868563438444,1.26184866143295,1.91960207048034,4.66828616977833,35.1228788323918,14.3971879241284,18.0227854505865,1.27993938234725,2.52350209173887,1.14846392823004,0.86152399231815,1.07735616342945,0.950117097281869,0.504060259519861,2.43903561720835,8.25539875497521,6.1506478758457,15.8481681015439,1.1554064790051,1.66234645358492,2.04169356262369,1.67412652294763,3.906676722619,0.523523743973798,0,0,0,23.6686017794085,23.6208249741469,17.2533947031981,10.1710874765245,22.8926414199469,17.7945808014922,22.5538682926169,20.7179904005537,21.5628846547457,1.67782606057736,0,0.336093799142464,12.3484529297255,14.6132054368766,14.4388185837684,19.624696703381,29.0945038599618,17.747279298173,8.13226876965917,4.4464739805557,8.09909745553259,7.9109309005358,2.1314403448383,5.99200221036809,11.5265491596466,16.4866483570479,14.5806413398226,14.5124223332454,17.7103610330358,20.0990372265968,16.5362578940188,15.4311208339361,10.1114066527102,24.2254938198655,27.9635270406561,23.5017995882053,20.1786020227197,25.3420772778675,25.5247551572812,34.0603258781685,41.6444331423443,31.4764390420229,16.4992007865254,27.7624777558251,27.7735174279698,18.1742863999642,20.6310359091524,8.69593466105033,4.30211938490693,3.39985666853875,2.69851595818909,1.94932925234301,4.48026887097336,13.2017754923847,30.1661670963162,23.9003124234639,19.0803370235584,23.9433813620357,19.2489716121477,10.1922095882658,14.2213340630666,11.6905162146056,9.62767488805375,9.0994400102661,8.67797485864856,9.32176381129818,16.3286352971307,6.59244241711316,9.13396434936424,8.07154240396205,8.59119051149949,10.4653949350777,10.053327306374,2.71914464507811,15.1829324765907,8.84610551949874,6.63244084784378,5.74187947997023,6.78825354389311,1.86391761218122,38.6470652055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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56297 | |||
|HGNC= | |||
|MCL_coexpression_id=463 | |||
|TSSclassifier=NA | |||
|UniProt=O88848,D3Z067,E9PZG3 | |||
|association_with_transcript=0bp_to_ENSMUST00000023405,ENSMUST00000149797,ENSMUST00000172185_5end | |||
|cluster_id=chr16:59638950..59639017,- | |||
|description=CAGE_peak_1_at_Arl6_5end | |||
|id=chr16:59638950..59639017,- | |||
|ontology_enrichment_celltype=CL:0000055!6.66e-11!50;CL:0000221!1.06e-10!44;CL:0000133!1.06e-10!44;CL:0002319!2.57e-10!43;CL:0000393!3.65e-10!39;CL:0000211!3.65e-10!39;CL:0000540!5.22e-09!33;CL:0000047!5.22e-09!33;CL:0000031!5.22e-09!33;CL:0000404!5.22e-09!33;CL:0000117!5.09e-08!23;CL:0000337!5.09e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.06e-10,44;CL:0000133,1.06e-10,44;CL:0002319,2.57e-10,43;CL:0000393,3.64e-10,39;CL:0000211,3.64e-10,39;CL:0000540,5.21e-09,33;CL:0000047,5.21e-09,33;CL:0000031,5.21e-09,33;CL:0000404,5.21e-09,33;CL:0000117,5.08e-08,23;CL:0000337,5.08e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.17e-27!75;UBERON:0001016!1.17e-27!75;UBERON:0001017!6.46e-27!73;UBERON:0005743!6.46e-27!73;UBERON:0000033!4.32e-26!63;UBERON:0004121!5.63e-25!102;UBERON:0000924!5.63e-25!102;UBERON:0006601!5.63e-25!102;UBERON:0002346!8.37e-25!71;UBERON:0003075!8.37e-25!71;UBERON:0007284!8.37e-25!71;UBERON:0001049!1.24e-22!52;UBERON:0005068!1.24e-22!52;UBERON:0006241!1.24e-22!52;UBERON:0007135!1.24e-22!52;UBERON:0000955!3.45e-22!50;UBERON:0006238!3.45e-22!50;UBERON:0003056!6.89e-22!49;UBERON:0002616!1.29e-21!49;UBERON:0003080!8.87e-18!40;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002020!2.47e-14!34;UBERON:0002791!1.03e-12!29;UBERON:0003528!1.03e-12!29;UBERON:0001893!1.03e-12!29;UBERON:0000153!1.89e-12!94;UBERON:0007811!2.69e-12!86;UBERON:0004111!3.49e-12!122;UBERON:0000025!5.54e-12!114;UBERON:0000956!7.23e-09!21;UBERON:0001869!7.23e-09!21;UBERON:0000203!7.23e-09!21;UBERON:0002619!3.84e-08!17;UBERON:0002021!4.34e-07!10;UBERON:0000411!4.34e-07!10;UBERON:0001950!4.34e-07!10;UBERON:0000475!5.15e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.16e-27,75;UBERON:0002346,1.58e-27,64;UBERON:0003075,1.58e-27,64;UBERON:0007284,1.58e-27,64;UBERON:0001017,6.42e-27,73;UBERON:0004121,9.72e-27,95;UBERON:0000924,9.72e-27,95;UBERON:0006601,9.72e-27,95;UBERON:0010314,6.12e-25,92;UBERON:0010371,3.34e-24,73;UBERON:0000073,1.90e-23,54;UBERON:0001049,1.23e-22,52;UBERON:0005068,1.23e-22,52;UBERON:0006241,1.23e-22,52;UBERON:0007135,1.23e-22,52;UBERON:0003056,6.86e-22,49;UBERON:0000955,8.53e-21,47;UBERON:0006238,8.53e-21,47;UBERON:0002616,3.13e-20,46;UBERON:0003080,8.84e-18,40;UBERON:0002780,4.27e-17,39;UBERON:0001890,4.27e-17,39;UBERON:0006240,4.27e-17,39;UBERON:0002020,2.46e-14,34;UBERON:0003528,1.02e-12,29;UBERON:0002791,1.02e-12,29;UBERON:0001893,1.02e-12,29;UBERON:0004111,3.48e-12,122;UBERON:0000025,5.53e-12,114;UBERON:0000956,7.22e-09,21;UBERON:0001869,7.22e-09,21;UBERON:0000203,7.22e-09,21;UBERON:0002619,3.84e-08,17;UBERON:0002021,4.34e-07,10;UBERON:0000411,4.34e-07,10;UBERON:0001950,4.34e-07,10 | |||
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| |||
|short_description=p1@Arl6 | |||
}} |
Latest revision as of 16:57, 25 September 2015
Short description: | p1@Arl6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arl6_5end |
Coexpression cluster: | MCL_coexpression_mm9:463 |
Association with transcript: | 0bp_to_ENSMUST00000023405, ENSMUST00000149797, ENSMUST00000172185_5end |
EntrezGene: | Arl6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.06e-10 | 44 |
neurectodermal cell | 1.06e-10 | 44 |
neural cell | 2.57e-10 | 43 |
electrically responsive cell | 3.64e-10 | 39 |
electrically active cell | 3.64e-10 | 39 |
neuron | 5.21e-09 | 33 |
neuronal stem cell | 5.21e-09 | 33 |
neuroblast | 5.21e-09 | 33 |
electrically signaling cell | 5.21e-09 | 33 |
CNS neuron (sensu Vertebrata) | 5.08e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.08e-08 | 23 |