FFCP PHASE1:Mm9::chr16:72563629..72563640,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=141|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:72563629..72563640,+|id=chr16:72563629..72563640,+|ontology_enrichment_celltype=CL:0000117!2.21e-21!23;CL:0000337!2.21e-21!23;CL:0000540!8.52e-14!33;CL:0000047!8.52e-14!33;CL:0000031!8.52e-14!33;CL:0000404!8.52e-14!33;CL:0000393!4.00e-11!39;CL:0000211!4.00e-11!39;CL:0002319!9.21e-10!43;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0002613!5.59e-09!3;CL:0000120!1.25e-08!3;CL:0002612!2.59e-08!3;CL:0000055!6.50e-08!50|ontology_enrichment_celltype_v019_2=CL:0002613,9.07e-28,3;CL:0000120,1.57e-26,3;CL:0000117,1.30e-18,23;CL:0000337,1.30e-18,23;CL:0000540,6.57e-13,33;CL:0000047,6.57e-13,33;CL:0000031,6.57e-13,33;CL:0000404,6.57e-13,33;CL:0000393,7.00e-11,39;CL:0000211,7.00e-11,39;CL:0002319,7.68e-10,43;CL:0000221,1.31e-09,44;CL:0000133,1.31e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002257!2.59e-08!3;UBERON:0002420!3.42e-08!8;UBERON:0007245!3.42e-08!8;UBERON:0010009!3.42e-08!8;UBERON:0010011!3.42e-08!8;UBERON:0000454!3.42e-08!8;UBERON:0001017!7.85e-07!73;UBERON:0005743!7.85e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.81e-17,5;UBERON:0002435,5.81e-17,5;UBERON:0000204,5.81e-17,5;UBERON:0010082,5.81e-17,5;UBERON:0002420,7.60e-11,8;UBERON:0007245,7.60e-11,8;UBERON:0010009,7.60e-11,8;UBERON:0010011,7.60e-11,8;UBERON:0000454,7.60e-11,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0.191690942036473,0,0,0.383062014255563,0,5.67111037239834,3.38504281328916,2.6045668527838,0,0.56276261003168,0.916789486660861,0.294628585473668,0.569486723196412,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,3.19219898720825,1.19513524027894,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0,0.188626341386076,0,0,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chr16:72563629..72563640,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:72563629..72563640,+ | |||
|description=CAGE_peak_at_chr16:72563629..72563640,+ | |||
|id=chr16:72563629..72563640,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.21e-21!23;CL:0000337!2.21e-21!23;CL:0000540!8.52e-14!33;CL:0000047!8.52e-14!33;CL:0000031!8.52e-14!33;CL:0000404!8.52e-14!33;CL:0000393!4.00e-11!39;CL:0000211!4.00e-11!39;CL:0002319!9.21e-10!43;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0002613!5.59e-09!3;CL:0000120!1.25e-08!3;CL:0002612!2.59e-08!3;CL:0000055!6.50e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,9.07e-28,3;CL:0000120,1.57e-26,3;CL:0000117,1.30e-18,23;CL:0000337,1.30e-18,23;CL:0000540,6.57e-13,33;CL:0000047,6.57e-13,33;CL:0000031,6.57e-13,33;CL:0000404,6.57e-13,33;CL:0000393,7.00e-11,39;CL:0000211,7.00e-11,39;CL:0002319,7.68e-10,43;CL:0000221,1.31e-09,44;CL:0000133,1.31e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002257!2.59e-08!3;UBERON:0002420!3.42e-08!8;UBERON:0007245!3.42e-08!8;UBERON:0010009!3.42e-08!8;UBERON:0010011!3.42e-08!8;UBERON:0000454!3.42e-08!8;UBERON:0001017!7.85e-07!73;UBERON:0005743!7.85e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.81e-17,5;UBERON:0002435,5.81e-17,5;UBERON:0000204,5.81e-17,5;UBERON:0010082,5.81e-17,5;UBERON:0002420,7.60e-11,8;UBERON:0007245,7.60e-11,8;UBERON:0010009,7.60e-11,8;UBERON:0010011,7.60e-11,8;UBERON:0000454,7.60e-11,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0.191690942036473,0,0,0.383062014255563,0,5.67111037239834,3.38504281328916,2.6045668527838,0,0.56276261003168,0.916789486660861,0.294628585473668,0.569486723196412,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,3.19219898720825,1.19513524027894,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0,0.188626341386076,0,0,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr16:72563629..72563640,+ | |||
}} |
Latest revision as of 01:22, 4 August 2015
Short description: | p@chr16:72563629..72563640, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:72563629..72563640, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 9.07e-28 | 3 |
granule cell | 1.57e-26 | 3 |
CNS neuron (sensu Vertebrata) | 1.30e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-18 | 23 |
neuron | 6.57e-13 | 33 |
neuronal stem cell | 6.57e-13 | 33 |
neuroblast | 6.57e-13 | 33 |
electrically signaling cell | 6.57e-13 | 33 |
electrically responsive cell | 7.00e-11 | 39 |
electrically active cell | 7.00e-11 | 39 |
neural cell | 7.68e-10 | 43 |
ectodermal cell | 1.31e-09 | 44 |
neurectodermal cell | 1.31e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 5.81e-17 | 5 |
striatum | 5.81e-17 | 5 |
ventral part of telencephalon | 5.81e-17 | 5 |
future corpus striatum | 5.81e-17 | 5 |
basal ganglion | 7.60e-11 | 8 |
nuclear complex of neuraxis | 7.60e-11 | 8 |
aggregate regional part of brain | 7.60e-11 | 8 |
collection of basal ganglia | 7.60e-11 | 8 |
cerebral subcortex | 7.60e-11 | 8 |