FFCP PHASE1:Mm9::chr17:24306593..24306658,-: Difference between revisions
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{{FFCP|EntrezGene=11984|HGNC=|MCL_coexpression_id=799|UniProt=P63082,E9Q9C5,D3Z3B2|association_with_transcript=0bp_to_ENSMUST00000098862,ENSMUST00000148541,ENSMUST00000150647_5end|description=CAGE_peak_2_at_Atp6v0c_5end|id=chr17:24306593..24306658,-|ontology_enrichment_celltype=CL:0000055!4.39e-13!50;CL:0002321!2.44e-11!70;CL:0000220!2.44e-11!70;CL:0000221!2.94e-11!44;CL:0000133!2.94e-11!44;CL:0002319!3.11e-11!43;CL:0000393!4.37e-10!39;CL:0000211!4.37e-10!39;CL:0000117!1.36e-08!23;CL:0000337!1.36e-08!23;CL:0000540!3.19e-08!33;CL:0000047!3.19e-08!33;CL:0000031!3.19e-08!33;CL:0000404!3.19e-08!33|ontology_enrichment_celltype_v019_2=CL:0002321,1.89e-11,70;CL:0000221,2.79e-11,44;CL:0000133,2.79e-11,44;CL:0002319,2.96e-11,43;CL:0000393,4.18e-10,39;CL:0000211,4.18e-10,39;CL:0000117,1.31e-08,23;CL:0000337,1.31e-08,23;CL:0000540,3.08e-08,33;CL:0000047,3.08e-08,33;CL:0000031,3.08e-08,33;CL:0000404,3.08e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.55e-24!75;UBERON:0001016!8.55e-24!75;UBERON:0001017!5.13e-23!73;UBERON:0005743!5.13e-23!73;UBERON:0004121!1.14e-18!102;UBERON:0000924!1.14e-18!102;UBERON:0006601!1.14e-18!102;UBERON:0001049!3.04e-18!52;UBERON:0005068!3.04e-18!52;UBERON:0006241!3.04e-18!52;UBERON:0007135!3.04e-18!52;UBERON:0000955!1.99e-17!50;UBERON:0006238!1.99e-17!50;UBERON:0002616!8.11e-17!49;UBERON:0002346!5.09e-15!71;UBERON:0003075!5.09e-15!71;UBERON:0007284!5.09e-15!71;UBERON:0002020!2.08e-14!34;UBERON:0000033!2.82e-14!63;UBERON:0003080!1.14e-12!40;UBERON:0002780!4.46e-12!39;UBERON:0001890!4.46e-12!39;UBERON:0006240!4.46e-12!39;UBERON:0002791!5.85e-12!29;UBERON:0003528!5.85e-12!29;UBERON:0001893!5.85e-12!29;UBERON:0003056!1.15e-09!49;UBERON:0000956!9.12e-09!21;UBERON:0001869!9.12e-09!21;UBERON:0000203!9.12e-09!21;UBERON:0002619!1.08e-08!17;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.64e-24,75;UBERON:0001017,4.60e-23,73;UBERON:0000073,1.89e-19,54;UBERON:0004121,2.19e-18,95;UBERON:0000924,2.19e-18,95;UBERON:0006601,2.19e-18,95;UBERON:0001049,2.79e-18,52;UBERON:0005068,2.79e-18,52;UBERON:0006241,2.79e-18,52;UBERON:0007135,2.79e-18,52;UBERON:0000955,9.23e-16,47;UBERON:0006238,9.23e-16,47;UBERON:0002616,3.64e-15,46;UBERON:0002346,5.85e-15,64;UBERON:0003075,5.85e-15,64;UBERON:0007284,5.85e-15,64;UBERON:0002020,1.95e-14,34;UBERON:0010314,1.77e-13,92;UBERON:0003080,1.08e-12,40;UBERON:0010371,1.69e-12,73;UBERON:0002780,4.22e-12,39;UBERON:0001890,4.22e-12,39;UBERON:0006240,4.22e-12,39;UBERON:0003528,5.55e-12,29;UBERON:0002791,5.55e-12,29;UBERON:0001893,5.55e-12,29;UBERON:0003056,1.14e-09,49;UBERON:0000956,8.79e-09,21;UBERON:0001869,8.79e-09,21;UBERON:0000203,8.79e-09,21;UBERON:0002619,1.04e-08,17;UBERON:0002021,1.93e-07,10;UBERON:0000411,1.93e-07,10;UBERON:0001950,1.93e-07,10|phase1_expression=3.04282809499109,5.93258192986914,7.73498706962211,3.62957053568196,2.00358291978539,2.51818907867835,3.73780224952841,0.645616617207881,1.68946466582,1.17032263160997,0.513653904676515,0.478632953972018,0.684802919724823,0.786783621770977,1.33243904726265,0.607425802169478,1.39912375625629,0.630924330716475,0.959801035240171,1.27316895539409,6.29320347117916,2.28369187762036,1.30599894569468,2.71987118748791,5.96464130774642,4.01962374880514,4.73838195774982,3.44753972297422,2.85035129184561,3.02436155711917,4.21287970245079,0,0.61506478758457,0,1.1554064790051,0.332469290716985,0.816677425049476,4.18531630736908,2.3440060335714,2.61761871986899,2.94115744015507,2.73218193983378,3.39857247121808,5.41356317294982,6.18399280439039,4.9557623083654,10.1710874765245,3.48840250208714,5.71184075109627,5.44403717407994,3.3596741190087,2.87505128729943,2.68452169692378,1.45072428402269,0.672187598284928,4.88792928468299,3.43840127926508,5.15672092277442,7.28339259094552,5.28990979272033,6.33831403506179,6.09920157724438,5.33576877666684,17.997994345628,27.6882581518753,19.8934432184908,9.58720353658895,8.06858441175265,1.8664130215526,3.10513658162888,3.78584930432488,9.99778445413313,9.49734726091938,3.67472397644862,2.97120960156533,2.75765635983006,8.8092704799511,9.95961237064464,11.5204899942183,7.64940468835124,5.6722339033494,3.12548022334056,16.7509799400829,14.6318278608237,11.4598685832608,8.54422897873636,7.26095572075425,6.15118171223492,6.28527404665428,3.92972112555285,2.02905142091174,2.58127163094416,5.439770669662,7.01614149129162,4.54843492213368,5.37632264516803,2.66844398250329,2.21559419351475,2.07828803682295,2.12003744706204,2.95771181531029,1.28326477414318,2.54805239706646,0,2.81438353314578,3.04031838570118,2.02209778005913,2.62622923353838,3.36619248741323,3.26572705942614,2.25530924795977,2.13125834818499,3.22861696158482,3.91878865436819,3.76283862834255,2.13633205260448,4.20231445148436,1.01219549843938,0,2.91180329905337,1.54589062922275,4.363877278217,0,4.39171195517321,6.49284791121711,4.34276993854605,4.67278985573089,4.19931911695385,3.68503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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11984 | |||
|HGNC= | |||
|MCL_coexpression_id=799 | |||
|TSSclassifier=NA | |||
|UniProt=P63082,E9Q9C5,D3Z3B2 | |||
|association_with_transcript=0bp_to_ENSMUST00000098862,ENSMUST00000148541,ENSMUST00000150647_5end | |||
|cluster_id=chr17:24306593..24306658,- | |||
|description=CAGE_peak_2_at_Atp6v0c_5end | |||
|id=chr17:24306593..24306658,- | |||
|ontology_enrichment_celltype=CL:0000055!4.39e-13!50;CL:0002321!2.44e-11!70;CL:0000220!2.44e-11!70;CL:0000221!2.94e-11!44;CL:0000133!2.94e-11!44;CL:0002319!3.11e-11!43;CL:0000393!4.37e-10!39;CL:0000211!4.37e-10!39;CL:0000117!1.36e-08!23;CL:0000337!1.36e-08!23;CL:0000540!3.19e-08!33;CL:0000047!3.19e-08!33;CL:0000031!3.19e-08!33;CL:0000404!3.19e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.89e-11,70;CL:0000221,2.79e-11,44;CL:0000133,2.79e-11,44;CL:0002319,2.96e-11,43;CL:0000393,4.18e-10,39;CL:0000211,4.18e-10,39;CL:0000117,1.31e-08,23;CL:0000337,1.31e-08,23;CL:0000540,3.08e-08,33;CL:0000047,3.08e-08,33;CL:0000031,3.08e-08,33;CL:0000404,3.08e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.55e-24!75;UBERON:0001016!8.55e-24!75;UBERON:0001017!5.13e-23!73;UBERON:0005743!5.13e-23!73;UBERON:0004121!1.14e-18!102;UBERON:0000924!1.14e-18!102;UBERON:0006601!1.14e-18!102;UBERON:0001049!3.04e-18!52;UBERON:0005068!3.04e-18!52;UBERON:0006241!3.04e-18!52;UBERON:0007135!3.04e-18!52;UBERON:0000955!1.99e-17!50;UBERON:0006238!1.99e-17!50;UBERON:0002616!8.11e-17!49;UBERON:0002346!5.09e-15!71;UBERON:0003075!5.09e-15!71;UBERON:0007284!5.09e-15!71;UBERON:0002020!2.08e-14!34;UBERON:0000033!2.82e-14!63;UBERON:0003080!1.14e-12!40;UBERON:0002780!4.46e-12!39;UBERON:0001890!4.46e-12!39;UBERON:0006240!4.46e-12!39;UBERON:0002791!5.85e-12!29;UBERON:0003528!5.85e-12!29;UBERON:0001893!5.85e-12!29;UBERON:0003056!1.15e-09!49;UBERON:0000956!9.12e-09!21;UBERON:0001869!9.12e-09!21;UBERON:0000203!9.12e-09!21;UBERON:0002619!1.08e-08!17;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.64e-24,75;UBERON:0001017,4.60e-23,73;UBERON:0000073,1.89e-19,54;UBERON:0004121,2.19e-18,95;UBERON:0000924,2.19e-18,95;UBERON:0006601,2.19e-18,95;UBERON:0001049,2.79e-18,52;UBERON:0005068,2.79e-18,52;UBERON:0006241,2.79e-18,52;UBERON:0007135,2.79e-18,52;UBERON:0000955,9.23e-16,47;UBERON:0006238,9.23e-16,47;UBERON:0002616,3.64e-15,46;UBERON:0002346,5.85e-15,64;UBERON:0003075,5.85e-15,64;UBERON:0007284,5.85e-15,64;UBERON:0002020,1.95e-14,34;UBERON:0010314,1.77e-13,92;UBERON:0003080,1.08e-12,40;UBERON:0010371,1.69e-12,73;UBERON:0002780,4.22e-12,39;UBERON:0001890,4.22e-12,39;UBERON:0006240,4.22e-12,39;UBERON:0003528,5.55e-12,29;UBERON:0002791,5.55e-12,29;UBERON:0001893,5.55e-12,29;UBERON:0003056,1.14e-09,49;UBERON:0000956,8.79e-09,21;UBERON:0001869,8.79e-09,21;UBERON:0000203,8.79e-09,21;UBERON:0002619,1.04e-08,17;UBERON:0002021,1.93e-07,10;UBERON:0000411,1.93e-07,10;UBERON:0001950,1.93e-07,10 | |||
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| |||
|short_description=p2@Atp6v0c | |||
}} |
Latest revision as of 01:20, 26 September 2015
Short description: | p2@Atp6v0c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atp6v0c_5end |
Coexpression cluster: | MCL_coexpression_mm9:799 |
Association with transcript: | 0bp_to_ENSMUST00000098862, ENSMUST00000148541, ENSMUST00000150647_5end |
EntrezGene: | Atp6v0c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.89e-11 | 70 |
ectodermal cell | 2.79e-11 | 44 |
neurectodermal cell | 2.79e-11 | 44 |
neural cell | 2.96e-11 | 43 |
electrically responsive cell | 4.18e-10 | 39 |
electrically active cell | 4.18e-10 | 39 |
CNS neuron (sensu Vertebrata) | 1.31e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.31e-08 | 23 |
neuron | 3.08e-08 | 33 |
neuronal stem cell | 3.08e-08 | 33 |
neuroblast | 3.08e-08 | 33 |
electrically signaling cell | 3.08e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.64e-24 | 75 |
central nervous system | 4.60e-23 | 73 |
regional part of nervous system | 1.89e-19 | 54 |
ectoderm-derived structure | 2.19e-18 | 95 |
ectoderm | 2.19e-18 | 95 |
presumptive ectoderm | 2.19e-18 | 95 |
neural tube | 2.79e-18 | 52 |
neural rod | 2.79e-18 | 52 |
future spinal cord | 2.79e-18 | 52 |
neural keel | 2.79e-18 | 52 |
brain | 9.23e-16 | 47 |
future brain | 9.23e-16 | 47 |
regional part of brain | 3.64e-15 | 46 |
neurectoderm | 5.85e-15 | 64 |
neural plate | 5.85e-15 | 64 |
presumptive neural plate | 5.85e-15 | 64 |
gray matter | 1.95e-14 | 34 |
structure with developmental contribution from neural crest | 1.77e-13 | 92 |
anterior neural tube | 1.08e-12 | 40 |
ecto-epithelium | 1.69e-12 | 73 |
regional part of forebrain | 4.22e-12 | 39 |
forebrain | 4.22e-12 | 39 |
future forebrain | 4.22e-12 | 39 |
brain grey matter | 5.55e-12 | 29 |
regional part of telencephalon | 5.55e-12 | 29 |
telencephalon | 5.55e-12 | 29 |
pre-chordal neural plate | 1.14e-09 | 49 |
cerebral cortex | 8.79e-09 | 21 |
cerebral hemisphere | 8.79e-09 | 21 |
pallium | 8.79e-09 | 21 |
regional part of cerebral cortex | 1.04e-08 | 17 |
occipital lobe | 1.93e-07 | 10 |
visual cortex | 1.93e-07 | 10 |
neocortex | 1.93e-07 | 10 |