FFCP PHASE1:Mm9::chr18:31476556..31476565,-: Difference between revisions
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{{FFCP|EntrezGene=19762|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=216bp_to_uc012bas.1_5end|description=CAGE_peak_8_at_Rit2_5end|id=chr18:31476556..31476565,-|ontology_enrichment_celltype=CL:0000117!1.32e-12!23;CL:0000337!1.32e-12!23;CL:0000540!1.48e-08!33;CL:0000047!1.48e-08!33;CL:0000031!1.48e-08!33;CL:0000404!1.48e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.31e-20,23;CL:0000337,4.31e-20,23;CL:0002614,3.26e-16,3;CL:0002610,5.00e-15,3;CL:0000540,1.36e-13,33;CL:0000047,1.36e-13,33;CL:0000031,1.36e-13,33;CL:0000404,1.36e-13,33;CL:0000393,2.76e-11,39;CL:0000211,2.76e-11,39;CL:0002611,1.22e-10,2;CL:0002319,4.19e-10,43;CL:0000221,7.66e-10,44;CL:0000133,7.66e-10,44;CL:0002612,2.07e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!9.62e-19!63;UBERON:0001017!3.57e-18!73;UBERON:0005743!3.57e-18!73;UBERON:0001049!1.61e-17!52;UBERON:0005068!1.61e-17!52;UBERON:0006241!1.61e-17!52;UBERON:0007135!1.61e-17!52;UBERON:0000073!2.04e-17!75;UBERON:0001016!2.04e-17!75;UBERON:0002346!2.13e-17!71;UBERON:0003075!2.13e-17!71;UBERON:0007284!2.13e-17!71;UBERON:0004121!6.76e-16!102;UBERON:0000924!6.76e-16!102;UBERON:0006601!6.76e-16!102;UBERON:0000955!3.91e-15!50;UBERON:0006238!3.91e-15!50;UBERON:0002616!2.97e-14!49;UBERON:0002020!1.40e-13!34;UBERON:0003076!7.05e-13!12;UBERON:0003057!7.05e-13!12;UBERON:0003056!6.60e-12!49;UBERON:0007811!3.08e-11!86;UBERON:0002298!4.23e-11!6;UBERON:0002240!3.19e-10!6;UBERON:0005174!3.19e-10!6;UBERON:0001137!3.19e-10!6;UBERON:0000153!1.59e-09!94;UBERON:0002420!6.30e-09!8;UBERON:0007245!6.30e-09!8;UBERON:0010009!6.30e-09!8;UBERON:0010011!6.30e-09!8;UBERON:0000454!6.30e-09!8;UBERON:0001948!1.22e-08!5;UBERON:0002315!1.22e-08!5;UBERON:0002791!2.37e-08!29;UBERON:0003528!2.37e-08!29;UBERON:0001893!2.37e-08!29;UBERON:0003080!2.96e-08!40;UBERON:0002950!6.25e-08!4;UBERON:0001891!6.25e-08!4;UBERON:0009616!6.25e-08!4;UBERON:0002780!2.41e-07!39;UBERON:0001890!2.41e-07!39;UBERON:0006240!2.41e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.24e-24,54;UBERON:0002950,3.43e-21,4;UBERON:0001891,3.43e-21,4;UBERON:0009616,3.43e-21,4;UBERON:0010286,3.43e-21,4;UBERON:0002240,1.91e-20,6;UBERON:0005174,1.91e-20,6;UBERON:0001137,1.91e-20,6;UBERON:0003076,8.50e-20,12;UBERON:0003057,8.50e-20,12;UBERON:0001017,9.22e-20,73;UBERON:0001049,1.78e-19,52;UBERON:0005068,1.78e-19,52;UBERON:0006241,1.78e-19,52;UBERON:0007135,1.78e-19,52;UBERON:0001016,3.57e-19,75;UBERON:0002038,3.26e-16,3;UBERON:0009663,3.26e-16,3;UBERON:0009661,3.26e-16,3;UBERON:0000125,3.26e-16,3;UBERON:0002308,3.26e-16,3;UBERON:0001948,8.81e-16,5;UBERON:0002315,8.81e-16,5;UBERON:0002346,2.02e-15,64;UBERON:0003075,2.02e-15,64;UBERON:0007284,2.02e-15,64;UBERON:0004684,5.00e-15,3;UBERON:0002275,5.00e-15,3;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0010371,2.99e-13,73;UBERON:0001896,1.94e-11,2;UBERON:0002298,1.94e-11,2;UBERON:0005290,1.94e-11,2;UBERON:0010096,1.94e-11,2;UBERON:0002256,1.22e-10,2;UBERON:0002020,1.61e-10,34;UBERON:0002420,2.50e-10,8;UBERON:0007245,2.50e-10,8;UBERON:0010009,2.50e-10,8;UBERON:0010011,2.50e-10,8;UBERON:0000454,2.50e-10,8;UBERON:0010314,4.74e-10,92;UBERON:0002616,1.59e-09,46;UBERON:0000955,2.73e-09,47;UBERON:0006238,2.73e-09,47;UBERON:0000025,1.15e-07,114;UBERON:0002257,2.07e-07,3;UBERON:0003080,5.19e-07,40;UBERON:0004111,5.24e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,2.57085885963423,1.54607978666129,0,0,0,2.20231761998777,1.78762273319263,2.15049146558741,0.395658863190582,0.0914876436024097,0,2.79182999001381,5.06486349028512,2.75036845998258,2.35702868378934,1.99320353118744,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,3.74476598512057,1.37250180845588,0.251308704225729,0.521472960576829,0.767146371990992,2.49345653471472,1.94689515681309,0,0,0,0.841767423545896,0,0,0,0.30140963567143,0.612328492361951,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,2.93029216480508,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.859265911718438,1.37016503954128,0,0,0.900642406448441,0.453142408984205,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0.377252682772152,0.280924522409647,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0.476872379894642,0,0.0941093804153306,0.169229215783353,0.548783918618318,0.789209134313529,0.271608227691724,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0|short_description=p8@Rit2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19762 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=216bp_to_uc012bas.1_5end | |||
|cluster_id=chr18:31476556..31476565,- | |||
|description=CAGE_peak_8_at_Rit2_5end | |||
|id=chr18:31476556..31476565,- | |||
|ontology_enrichment_celltype=CL:0000117!1.32e-12!23;CL:0000337!1.32e-12!23;CL:0000540!1.48e-08!33;CL:0000047!1.48e-08!33;CL:0000031!1.48e-08!33;CL:0000404!1.48e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.31e-20,23;CL:0000337,4.31e-20,23;CL:0002614,3.26e-16,3;CL:0002610,5.00e-15,3;CL:0000540,1.36e-13,33;CL:0000047,1.36e-13,33;CL:0000031,1.36e-13,33;CL:0000404,1.36e-13,33;CL:0000393,2.76e-11,39;CL:0000211,2.76e-11,39;CL:0002611,1.22e-10,2;CL:0002319,4.19e-10,43;CL:0000221,7.66e-10,44;CL:0000133,7.66e-10,44;CL:0002612,2.07e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.62e-19!63;UBERON:0001017!3.57e-18!73;UBERON:0005743!3.57e-18!73;UBERON:0001049!1.61e-17!52;UBERON:0005068!1.61e-17!52;UBERON:0006241!1.61e-17!52;UBERON:0007135!1.61e-17!52;UBERON:0000073!2.04e-17!75;UBERON:0001016!2.04e-17!75;UBERON:0002346!2.13e-17!71;UBERON:0003075!2.13e-17!71;UBERON:0007284!2.13e-17!71;UBERON:0004121!6.76e-16!102;UBERON:0000924!6.76e-16!102;UBERON:0006601!6.76e-16!102;UBERON:0000955!3.91e-15!50;UBERON:0006238!3.91e-15!50;UBERON:0002616!2.97e-14!49;UBERON:0002020!1.40e-13!34;UBERON:0003076!7.05e-13!12;UBERON:0003057!7.05e-13!12;UBERON:0003056!6.60e-12!49;UBERON:0007811!3.08e-11!86;UBERON:0002298!4.23e-11!6;UBERON:0002240!3.19e-10!6;UBERON:0005174!3.19e-10!6;UBERON:0001137!3.19e-10!6;UBERON:0000153!1.59e-09!94;UBERON:0002420!6.30e-09!8;UBERON:0007245!6.30e-09!8;UBERON:0010009!6.30e-09!8;UBERON:0010011!6.30e-09!8;UBERON:0000454!6.30e-09!8;UBERON:0001948!1.22e-08!5;UBERON:0002315!1.22e-08!5;UBERON:0002791!2.37e-08!29;UBERON:0003528!2.37e-08!29;UBERON:0001893!2.37e-08!29;UBERON:0003080!2.96e-08!40;UBERON:0002950!6.25e-08!4;UBERON:0001891!6.25e-08!4;UBERON:0009616!6.25e-08!4;UBERON:0002780!2.41e-07!39;UBERON:0001890!2.41e-07!39;UBERON:0006240!2.41e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.24e-24,54;UBERON:0002950,3.43e-21,4;UBERON:0001891,3.43e-21,4;UBERON:0009616,3.43e-21,4;UBERON:0010286,3.43e-21,4;UBERON:0002240,1.91e-20,6;UBERON:0005174,1.91e-20,6;UBERON:0001137,1.91e-20,6;UBERON:0003076,8.50e-20,12;UBERON:0003057,8.50e-20,12;UBERON:0001017,9.22e-20,73;UBERON:0001049,1.78e-19,52;UBERON:0005068,1.78e-19,52;UBERON:0006241,1.78e-19,52;UBERON:0007135,1.78e-19,52;UBERON:0001016,3.57e-19,75;UBERON:0002038,3.26e-16,3;UBERON:0009663,3.26e-16,3;UBERON:0009661,3.26e-16,3;UBERON:0000125,3.26e-16,3;UBERON:0002308,3.26e-16,3;UBERON:0001948,8.81e-16,5;UBERON:0002315,8.81e-16,5;UBERON:0002346,2.02e-15,64;UBERON:0003075,2.02e-15,64;UBERON:0007284,2.02e-15,64;UBERON:0004684,5.00e-15,3;UBERON:0002275,5.00e-15,3;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0010371,2.99e-13,73;UBERON:0001896,1.94e-11,2;UBERON:0002298,1.94e-11,2;UBERON:0005290,1.94e-11,2;UBERON:0010096,1.94e-11,2;UBERON:0002256,1.22e-10,2;UBERON:0002020,1.61e-10,34;UBERON:0002420,2.50e-10,8;UBERON:0007245,2.50e-10,8;UBERON:0010009,2.50e-10,8;UBERON:0010011,2.50e-10,8;UBERON:0000454,2.50e-10,8;UBERON:0010314,4.74e-10,92;UBERON:0002616,1.59e-09,46;UBERON:0000955,2.73e-09,47;UBERON:0006238,2.73e-09,47;UBERON:0000025,1.15e-07,114;UBERON:0002257,2.07e-07,3;UBERON:0003080,5.19e-07,40;UBERON:0004111,5.24e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,2.57085885963423,1.54607978666129,0,0,0,2.20231761998777,1.78762273319263,2.15049146558741,0.395658863190582,0.0914876436024097,0,2.79182999001381,5.06486349028512,2.75036845998258,2.35702868378934,1.99320353118744,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,3.74476598512057,1.37250180845588,0.251308704225729,0.521472960576829,0.767146371990992,2.49345653471472,1.94689515681309,0,0,0,0.841767423545896,0,0,0,0.30140963567143,0.612328492361951,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,2.93029216480508,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.859265911718438,1.37016503954128,0,0,0.900642406448441,0.453142408984205,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0.377252682772152,0.280924522409647,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0.476872379894642,0,0.0941093804153306,0.169229215783353,0.548783918618318,0.789209134313529,0.271608227691724,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p8@Rit2 | |||
}} |
Latest revision as of 03:14, 27 September 2015
Short description: | p8@Rit2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Rit2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 216bp_to_uc012bas.1_5end |
EntrezGene: | Rit2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.31e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.31e-20 | 23 |
neuron of the substantia nigra | 3.26e-16 | 3 |
raphe nuclei neuron | 5.00e-15 | 3 |
neuron | 1.36e-13 | 33 |
neuronal stem cell | 1.36e-13 | 33 |
neuroblast | 1.36e-13 | 33 |
electrically signaling cell | 1.36e-13 | 33 |
electrically responsive cell | 2.76e-11 | 39 |
electrically active cell | 2.76e-11 | 39 |
neuron of the dorsal spinal cord | 1.22e-10 | 2 |
neural cell | 4.19e-10 | 43 |
ectodermal cell | 7.66e-10 | 44 |
neurectodermal cell | 7.66e-10 | 44 |
neuron of the ventral spinal cord | 2.07e-07 | 3 |