FFCP PHASE1:Mm9::chr19:47098035..47098046,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=941|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:47098035..47098046,+|id=chr19:47098035..47098046,+|ontology_enrichment_celltype=CL:0000117!5.87e-26!23;CL:0000337!5.87e-26!23;CL:0000540!1.66e-17!33;CL:0000047!1.66e-17!33;CL:0000031!1.66e-17!33;CL:0000404!1.66e-17!33;CL:0000393!1.05e-13!39;CL:0000211!1.05e-13!39;CL:0002319!8.81e-12!43;CL:0000221!2.34e-11!44;CL:0000133!2.34e-11!44;CL:0000055!3.42e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.23e-49,23;CL:0000337,7.23e-49,23;CL:0000540,3.16e-33,33;CL:0000047,3.16e-33,33;CL:0000031,3.16e-33,33;CL:0000404,3.16e-33,33;CL:0000393,1.10e-27,39;CL:0000211,1.10e-27,39;CL:0002319,7.60e-25,43;CL:0000221,3.24e-24,44;CL:0000133,3.24e-24,44;CL:0002321,3.83e-14,70;CL:0000120,6.29e-14,3;CL:0002613,1.99e-13,3;CL:0002610,6.77e-13,3;CL:0002612,1.08e-12,3;CL:0000723,3.43e-10,91;CL:0000048,3.43e-10,91;CL:0000034,2.25e-09,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.35e-26!71;UBERON:0003075!4.35e-26!71;UBERON:0007284!4.35e-26!71;UBERON:0001017!3.24e-23!73;UBERON:0005743!3.24e-23!73;UBERON:0001049!4.56e-23!52;UBERON:0005068!4.56e-23!52;UBERON:0006241!4.56e-23!52;UBERON:0007135!4.56e-23!52;UBERON:0004121!4.56e-23!102;UBERON:0000924!4.56e-23!102;UBERON:0006601!4.56e-23!102;UBERON:0000073!2.94e-22!75;UBERON:0001016!2.94e-22!75;UBERON:0002020!2.67e-21!34;UBERON:0000033!2.46e-20!63;UBERON:0002616!9.63e-20!49;UBERON:0000955!3.73e-19!50;UBERON:0006238!3.73e-19!50;UBERON:0003056!1.39e-18!49;UBERON:0003080!1.89e-15!40;UBERON:0002791!2.15e-15!29;UBERON:0003528!2.15e-15!29;UBERON:0001893!2.15e-15!29;UBERON:0002780!1.27e-14!39;UBERON:0001890!1.27e-14!39;UBERON:0006240!1.27e-14!39;UBERON:0007811!5.31e-12!86;UBERON:0000956!4.05e-10!21;UBERON:0001869!4.05e-10!21;UBERON:0000203!4.05e-10!21;UBERON:0000153!4.18e-10!94;UBERON:0002240!3.33e-09!6;UBERON:0005174!3.33e-09!6;UBERON:0001137!3.33e-09!6;UBERON:0003076!1.72e-08!12;UBERON:0003057!1.72e-08!12;UBERON:0001948!6.64e-08!5;UBERON:0002315!6.64e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.84e-24,34;UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0000073,2.97e-21,54;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0002420,1.28e-17,8;UBERON:0007245,1.28e-17,8;UBERON:0010009,1.28e-17,8;UBERON:0010011,1.28e-17,8;UBERON:0000454,1.28e-17,8;UBERON:0001049,4.40e-17,52;UBERON:0005068,4.40e-17,52;UBERON:0006241,4.40e-17,52;UBERON:0007135,4.40e-17,52;UBERON:0002240,9.26e-17,6;UBERON:0005174,9.26e-17,6;UBERON:0001137,9.26e-17,6;UBERON:0003528,5.95e-15,29;UBERON:0002791,5.95e-15,29;UBERON:0001893,5.95e-15,29;UBERON:0000369,1.39e-13,5;UBERON:0002435,1.39e-13,5;UBERON:0000204,1.39e-13,5;UBERON:0010082,1.39e-13,5;UBERON:0002346,2.32e-13,64;UBERON:0003075,2.32e-13,64;UBERON:0007284,2.32e-13,64;UBERON:0001948,3.36e-13,5;UBERON:0002315,3.36e-13,5;UBERON:0004684,6.77e-13,3;UBERON:0002275,6.77e-13,3;UBERON:0002257,1.08e-12,3;UBERON:0010371,2.27e-11,73;UBERON:0002780,1.18e-10,39;UBERON:0001890,1.18e-10,39;UBERON:0006240,1.18e-10,39;UBERON:0003080,2.41e-10,40;UBERON:0002616,9.27e-09,46;UBERON:0000955,1.56e-08,47;UBERON:0006238,1.56e-08,47;UBERON:0010314,1.94e-08,92;UBERON:0003076,2.72e-08,12;UBERON:0003057,2.72e-08,12;UBERON:0003056,4.11e-08,49;UBERON:0011216,6.78e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,3.1739458756322,2.53532561402472,0,0,0,0,0,0,0,1.14058573539325,2.43010688997043,0.630974884054146,1.71390590642282,0.883474163806454,0.979926393719632,0.958454710182364,0,2.20231761998777,1.14918604276669,2.30409799884365,2.37395317914349,6.12967212136145,1.56274011167028,1.11673199600552,0,1.06958773443767,1.47314292736834,2.27794689278565,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,0,1.38219787324151,0.695297280769106,0.255715457330331,0.62336413367868,0.162241263067758,0,0,0,0.420883711772948,0,0,0.540186389416048,0.150704817835715,0.136072998302656,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703270119553219,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0,1.14579102687879,0.68741272937475,0,0,0.675022500231806,0.900642406448441,1.81256963593682,0,0.518936737920883,0.798049746802062,0,0.243106717068294,0.209613162627982,0,0,0,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0,0,0,0,0,0,0.376437521661322,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.999242311751784,0,0,0,0,0|short_description=p@chr19:47098035..47098046,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=941 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:47098035..47098046,+ | |||
|description=CAGE_peak_at_chr19:47098035..47098046,+ | |||
|id=chr19:47098035..47098046,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.87e-26!23;CL:0000337!5.87e-26!23;CL:0000540!1.66e-17!33;CL:0000047!1.66e-17!33;CL:0000031!1.66e-17!33;CL:0000404!1.66e-17!33;CL:0000393!1.05e-13!39;CL:0000211!1.05e-13!39;CL:0002319!8.81e-12!43;CL:0000221!2.34e-11!44;CL:0000133!2.34e-11!44;CL:0000055!3.42e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.23e-49,23;CL:0000337,7.23e-49,23;CL:0000540,3.16e-33,33;CL:0000047,3.16e-33,33;CL:0000031,3.16e-33,33;CL:0000404,3.16e-33,33;CL:0000393,1.10e-27,39;CL:0000211,1.10e-27,39;CL:0002319,7.60e-25,43;CL:0000221,3.24e-24,44;CL:0000133,3.24e-24,44;CL:0002321,3.83e-14,70;CL:0000120,6.29e-14,3;CL:0002613,1.99e-13,3;CL:0002610,6.77e-13,3;CL:0002612,1.08e-12,3;CL:0000723,3.43e-10,91;CL:0000048,3.43e-10,91;CL:0000034,2.25e-09,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.35e-26!71;UBERON:0003075!4.35e-26!71;UBERON:0007284!4.35e-26!71;UBERON:0001017!3.24e-23!73;UBERON:0005743!3.24e-23!73;UBERON:0001049!4.56e-23!52;UBERON:0005068!4.56e-23!52;UBERON:0006241!4.56e-23!52;UBERON:0007135!4.56e-23!52;UBERON:0004121!4.56e-23!102;UBERON:0000924!4.56e-23!102;UBERON:0006601!4.56e-23!102;UBERON:0000073!2.94e-22!75;UBERON:0001016!2.94e-22!75;UBERON:0002020!2.67e-21!34;UBERON:0000033!2.46e-20!63;UBERON:0002616!9.63e-20!49;UBERON:0000955!3.73e-19!50;UBERON:0006238!3.73e-19!50;UBERON:0003056!1.39e-18!49;UBERON:0003080!1.89e-15!40;UBERON:0002791!2.15e-15!29;UBERON:0003528!2.15e-15!29;UBERON:0001893!2.15e-15!29;UBERON:0002780!1.27e-14!39;UBERON:0001890!1.27e-14!39;UBERON:0006240!1.27e-14!39;UBERON:0007811!5.31e-12!86;UBERON:0000956!4.05e-10!21;UBERON:0001869!4.05e-10!21;UBERON:0000203!4.05e-10!21;UBERON:0000153!4.18e-10!94;UBERON:0002240!3.33e-09!6;UBERON:0005174!3.33e-09!6;UBERON:0001137!3.33e-09!6;UBERON:0003076!1.72e-08!12;UBERON:0003057!1.72e-08!12;UBERON:0001948!6.64e-08!5;UBERON:0002315!6.64e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.84e-24,34;UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0000073,2.97e-21,54;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0002420,1.28e-17,8;UBERON:0007245,1.28e-17,8;UBERON:0010009,1.28e-17,8;UBERON:0010011,1.28e-17,8;UBERON:0000454,1.28e-17,8;UBERON:0001049,4.40e-17,52;UBERON:0005068,4.40e-17,52;UBERON:0006241,4.40e-17,52;UBERON:0007135,4.40e-17,52;UBERON:0002240,9.26e-17,6;UBERON:0005174,9.26e-17,6;UBERON:0001137,9.26e-17,6;UBERON:0003528,5.95e-15,29;UBERON:0002791,5.95e-15,29;UBERON:0001893,5.95e-15,29;UBERON:0000369,1.39e-13,5;UBERON:0002435,1.39e-13,5;UBERON:0000204,1.39e-13,5;UBERON:0010082,1.39e-13,5;UBERON:0002346,2.32e-13,64;UBERON:0003075,2.32e-13,64;UBERON:0007284,2.32e-13,64;UBERON:0001948,3.36e-13,5;UBERON:0002315,3.36e-13,5;UBERON:0004684,6.77e-13,3;UBERON:0002275,6.77e-13,3;UBERON:0002257,1.08e-12,3;UBERON:0010371,2.27e-11,73;UBERON:0002780,1.18e-10,39;UBERON:0001890,1.18e-10,39;UBERON:0006240,1.18e-10,39;UBERON:0003080,2.41e-10,40;UBERON:0002616,9.27e-09,46;UBERON:0000955,1.56e-08,47;UBERON:0006238,1.56e-08,47;UBERON:0010314,1.94e-08,92;UBERON:0003076,2.72e-08,12;UBERON:0003057,2.72e-08,12;UBERON:0003056,4.11e-08,49;UBERON:0011216,6.78e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,3.1739458756322,2.53532561402472,0,0,0,0,0,0,0,1.14058573539325,2.43010688997043,0.630974884054146,1.71390590642282,0.883474163806454,0.979926393719632,0.958454710182364,0,2.20231761998777,1.14918604276669,2.30409799884365,2.37395317914349,6.12967212136145,1.56274011167028,1.11673199600552,0,1.06958773443767,1.47314292736834,2.27794689278565,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,0,1.38219787324151,0.695297280769106,0.255715457330331,0.62336413367868,0.162241263067758,0,0,0,0.420883711772948,0,0,0.540186389416048,0.150704817835715,0.136072998302656,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703270119553219,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0,1.14579102687879,0.68741272937475,0,0,0.675022500231806,0.900642406448441,1.81256963593682,0,0.518936737920883,0.798049746802062,0,0.243106717068294,0.209613162627982,0,0,0,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0,0,0,0,0,0,0.376437521661322,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.999242311751784,0,0,0,0,0 | |||
|short_description=p@chr19:47098035..47098046,+ | |||
}} |
Latest revision as of 06:15, 4 August 2015
Short description: | p@chr19:47098035..47098046, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47098035..47098046, + |
Coexpression cluster: | MCL_coexpression_mm9:941 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.23e-49 | 23 |
neuroblast (sensu Vertebrata) | 7.23e-49 | 23 |
neuron | 3.16e-33 | 33 |
neuronal stem cell | 3.16e-33 | 33 |
neuroblast | 3.16e-33 | 33 |
electrically signaling cell | 3.16e-33 | 33 |
electrically responsive cell | 1.10e-27 | 39 |
electrically active cell | 1.10e-27 | 39 |
neural cell | 7.60e-25 | 43 |
ectodermal cell | 3.24e-24 | 44 |
neurectodermal cell | 3.24e-24 | 44 |
embryonic cell | 3.83e-14 | 70 |
granule cell | 6.29e-14 | 3 |
striatum neuron | 1.99e-13 | 3 |
raphe nuclei neuron | 6.77e-13 | 3 |
neuron of the ventral spinal cord | 1.08e-12 | 3 |
somatic stem cell | 3.43e-10 | 91 |
multi fate stem cell | 3.43e-10 | 91 |
stem cell | 2.25e-09 | 97 |