FFCP PHASE1:Mm9::chr19:55972441..55972456,+: Difference between revisions
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{{FFCP|EntrezGene=21416|HGNC=|MCL_coexpression_id=1732|UniProt=|association_with_transcript=-342bp_to_ENSMUST00000143334_5end|description=CAGE_peak_18_at_Tcf7l2_5end|id=chr19:55972441..55972456,+|ontology_enrichment_celltype=CL:0000117!5.31e-08!23;CL:0000337!5.31e-08!23;CL:0002613!5.31e-07!3;CL:0000120!6.59e-07!3|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-21,23;CL:0000337,1.31e-21,23;CL:0002613,2.57e-20,3;CL:0000120,5.37e-20,3;CL:0002610,4.09e-19,3;CL:0000540,8.55e-15,33;CL:0000047,8.55e-15,33;CL:0000031,8.55e-15,33;CL:0000404,8.55e-15,33;CL:0002319,1.02e-13,43;CL:0000221,2.21e-13,44;CL:0000133,2.21e-13,44;CL:0000393,2.24e-12,39;CL:0000211,2.24e-12,39;CL:0002321,5.51e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002420!4.09e-10!8;UBERON:0007245!4.09e-10!8;UBERON:0010009!4.09e-10!8;UBERON:0010011!4.09e-10!8;UBERON:0000454!4.09e-10!8;UBERON:0000369!2.86e-09!5;UBERON:0002435!2.86e-09!5;UBERON:0000204!2.86e-09!5;UBERON:0010082!2.86e-09!5|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.09e-19,3;UBERON:0002275,4.09e-19,3;UBERON:0000369,1.95e-12,5;UBERON:0002435,1.95e-12,5;UBERON:0000204,1.95e-12,5;UBERON:0010082,1.95e-12,5;UBERON:0001017,2.72e-11,73;UBERON:0001016,5.91e-11,75;UBERON:0004121,2.39e-08,95;UBERON:0000924,2.39e-08,95;UBERON:0006601,2.39e-08,95;UBERON:0002259,4.65e-08,1;UBERON:0002314,4.65e-08,1;UBERON:0004061,4.65e-08,1;UBERON:0006777,4.65e-08,1;UBERON:0005882,4.65e-08,1;UBERON:0002420,5.72e-08,8;UBERON:0007245,5.72e-08,8;UBERON:0010009,5.72e-08,8;UBERON:0010011,5.72e-08,8;UBERON:0000454,5.72e-08,8;UBERON:0000073,8.12e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,7.48570905180512,10.5798195854407,5.07065122804943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40463523997555,3.70293280447044,2.15049146558741,10.6827893061457,12.4423195299277,7.29278718779464,0.558365998002762,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4158742229861,0.457500602818626,0.125654352112864,0.173824320192276,0,3.94797284663164,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.320125762024346,0.402048282689293,0.952587382566147,0.463537303779422,0,0,0.147198920134397,0.342869252385415,0.887379030796687,0.476872379894642,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,1.05227884575137,0.543216455383447,0.561142271657738,0.474540072496697,0.197008964751127,0.818462086339379,0.77468420592983,0.192906610981141,2.24829520144151,0.701794825336225,0.429742108096597,0,0,0|short_description=p18@Tcf7l2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |||
|HGNC= | |||
|MCL_coexpression_id=1732 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-342bp_to_ENSMUST00000143334_5end | |||
|cluster_id=chr19:55972441..55972456,+ | |||
|description=CAGE_peak_18_at_Tcf7l2_5end | |||
|id=chr19:55972441..55972456,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.31e-08!23;CL:0000337!5.31e-08!23;CL:0002613!5.31e-07!3;CL:0000120!6.59e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-21,23;CL:0000337,1.31e-21,23;CL:0002613,2.57e-20,3;CL:0000120,5.37e-20,3;CL:0002610,4.09e-19,3;CL:0000540,8.55e-15,33;CL:0000047,8.55e-15,33;CL:0000031,8.55e-15,33;CL:0000404,8.55e-15,33;CL:0002319,1.02e-13,43;CL:0000221,2.21e-13,44;CL:0000133,2.21e-13,44;CL:0000393,2.24e-12,39;CL:0000211,2.24e-12,39;CL:0002321,5.51e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!4.09e-10!8;UBERON:0007245!4.09e-10!8;UBERON:0010009!4.09e-10!8;UBERON:0010011!4.09e-10!8;UBERON:0000454!4.09e-10!8;UBERON:0000369!2.86e-09!5;UBERON:0002435!2.86e-09!5;UBERON:0000204!2.86e-09!5;UBERON:0010082!2.86e-09!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.09e-19,3;UBERON:0002275,4.09e-19,3;UBERON:0000369,1.95e-12,5;UBERON:0002435,1.95e-12,5;UBERON:0000204,1.95e-12,5;UBERON:0010082,1.95e-12,5;UBERON:0001017,2.72e-11,73;UBERON:0001016,5.91e-11,75;UBERON:0004121,2.39e-08,95;UBERON:0000924,2.39e-08,95;UBERON:0006601,2.39e-08,95;UBERON:0002259,4.65e-08,1;UBERON:0002314,4.65e-08,1;UBERON:0004061,4.65e-08,1;UBERON:0006777,4.65e-08,1;UBERON:0005882,4.65e-08,1;UBERON:0002420,5.72e-08,8;UBERON:0007245,5.72e-08,8;UBERON:0010009,5.72e-08,8;UBERON:0010011,5.72e-08,8;UBERON:0000454,5.72e-08,8;UBERON:0000073,8.12e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,7.48570905180512,10.5798195854407,5.07065122804943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40463523997555,3.70293280447044,2.15049146558741,10.6827893061457,12.4423195299277,7.29278718779464,0.558365998002762,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4158742229861,0.457500602818626,0.125654352112864,0.173824320192276,0,3.94797284663164,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.320125762024346,0.402048282689293,0.952587382566147,0.463537303779422,0,0,0.147198920134397,0.342869252385415,0.887379030796687,0.476872379894642,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,1.05227884575137,0.543216455383447,0.561142271657738,0.474540072496697,0.197008964751127,0.818462086339379,0.77468420592983,0.192906610981141,2.24829520144151,0.701794825336225,0.429742108096597,0,0,0 | |||
|short_description=p18@Tcf7l2 | |||
}} |
Latest revision as of 23:59, 25 September 2015
Short description: | p18@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1732 |
Association with transcript: | -342bp_to_ENSMUST00000143334_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.31e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.31e-21 | 23 |
striatum neuron | 2.57e-20 | 3 |
granule cell | 5.37e-20 | 3 |
raphe nuclei neuron | 4.09e-19 | 3 |
neuron | 8.55e-15 | 33 |
neuronal stem cell | 8.55e-15 | 33 |
neuroblast | 8.55e-15 | 33 |
electrically signaling cell | 8.55e-15 | 33 |
neural cell | 1.02e-13 | 43 |
ectodermal cell | 2.21e-13 | 44 |
neurectodermal cell | 2.21e-13 | 44 |
electrically responsive cell | 2.24e-12 | 39 |
electrically active cell | 2.24e-12 | 39 |
embryonic cell | 5.51e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.09e-19 | 3 |
reticular formation | 4.09e-19 | 3 |
corpus striatum | 1.95e-12 | 5 |
striatum | 1.95e-12 | 5 |
ventral part of telencephalon | 1.95e-12 | 5 |
future corpus striatum | 1.95e-12 | 5 |
central nervous system | 2.72e-11 | 73 |
nervous system | 5.91e-11 | 75 |
ectoderm-derived structure | 2.39e-08 | 95 |
ectoderm | 2.39e-08 | 95 |
presumptive ectoderm | 2.39e-08 | 95 |
corpora quadrigemina | 4.65e-08 | 1 |
midbrain tectum | 4.65e-08 | 1 |
neural tube mantle layer | 4.65e-08 | 1 |
tectal plate | 4.65e-08 | 1 |
neural tube alar plate | 4.65e-08 | 1 |
basal ganglion | 5.72e-08 | 8 |
nuclear complex of neuraxis | 5.72e-08 | 8 |
aggregate regional part of brain | 5.72e-08 | 8 |
collection of basal ganglia | 5.72e-08 | 8 |
cerebral subcortex | 5.72e-08 | 8 |
regional part of nervous system | 8.12e-07 | 54 |