FFCP PHASE1:Mm9::chr19:55985099..55985142,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=141|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:55985099..55985142,-|id=chr19:55985099..55985142,-|ontology_enrichment_celltype=CL:0002319!6.80e-07!43|ontology_enrichment_celltype_v019_2=CL:0002613,1.46e-30,3;CL:0000117,6.69e-27,23;CL:0000337,6.69e-27,23;CL:0000540,1.01e-18,33;CL:0000047,1.01e-18,33;CL:0000031,1.01e-18,33;CL:0000404,1.01e-18,33;CL:0000393,8.08e-16,39;CL:0000211,8.08e-16,39;CL:0002319,2.49e-14,43;CL:0000221,5.33e-14,44;CL:0000133,5.33e-14,44;CL:0000120,6.65e-14,3;CL:0002610,7.72e-14,3;CL:0002321,1.07e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002420,4.20e-20,8;UBERON:0007245,4.20e-20,8;UBERON:0010009,4.20e-20,8;UBERON:0010011,4.20e-20,8;UBERON:0000454,4.20e-20,8;UBERON:0000369,1.17e-18,5;UBERON:0002435,1.17e-18,5;UBERON:0000204,1.17e-18,5;UBERON:0010082,1.17e-18,5;UBERON:0004684,7.72e-14,3;UBERON:0002275,7.72e-14,3;UBERON:0001017,2.51e-08,73;UBERON:0001016,4.28e-08,75|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0,0.257259436035947,0,0,2.42779753031517,0.528990979272033,1.90149421051854,0.677689064138264,0,0.899899717281399,0,0,0.299600110518405,0.768436610643109,0,0.135005938331691,0,0,0.220868540951614,0,0,0,3.30347642998166,0.638436690425939,1.0752457327937,4.08847491963601,6.31264740856627,3.12548022334056,0,1.12552522006336,0.15279824777681,0,0.142371680799103,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.301445281105245,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.748953197024114,0,0.251308704225729,0,0,0.62336413367868,0.324482526135515,0,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0.268412837520744,0,0,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0.193952487167626,0.280543279561274,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.259229946583586,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0,0,0.209613162627982,0,0,0.412070114477788,0,0,0.760437899670719,0,0,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0.25384382367503,0,0,0,0,0,0.0985044823755635,0.818462086339379,0,0,1.24905288968973,0,0.214871054048298,0,0.441182838239031,0|short_description=p@chr19:55985099..55985142,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:55985099..55985142,- | |||
|description=CAGE_peak_at_chr19:55985099..55985142,- | |||
|id=chr19:55985099..55985142,- | |||
|ontology_enrichment_celltype=CL:0002319!6.80e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.46e-30,3;CL:0000117,6.69e-27,23;CL:0000337,6.69e-27,23;CL:0000540,1.01e-18,33;CL:0000047,1.01e-18,33;CL:0000031,1.01e-18,33;CL:0000404,1.01e-18,33;CL:0000393,8.08e-16,39;CL:0000211,8.08e-16,39;CL:0002319,2.49e-14,43;CL:0000221,5.33e-14,44;CL:0000133,5.33e-14,44;CL:0000120,6.65e-14,3;CL:0002610,7.72e-14,3;CL:0002321,1.07e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,4.20e-20,8;UBERON:0007245,4.20e-20,8;UBERON:0010009,4.20e-20,8;UBERON:0010011,4.20e-20,8;UBERON:0000454,4.20e-20,8;UBERON:0000369,1.17e-18,5;UBERON:0002435,1.17e-18,5;UBERON:0000204,1.17e-18,5;UBERON:0010082,1.17e-18,5;UBERON:0004684,7.72e-14,3;UBERON:0002275,7.72e-14,3;UBERON:0001017,2.51e-08,73;UBERON:0001016,4.28e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0,0.257259436035947,0,0,2.42779753031517,0.528990979272033,1.90149421051854,0.677689064138264,0,0.899899717281399,0,0,0.299600110518405,0.768436610643109,0,0.135005938331691,0,0,0.220868540951614,0,0,0,3.30347642998166,0.638436690425939,1.0752457327937,4.08847491963601,6.31264740856627,3.12548022334056,0,1.12552522006336,0.15279824777681,0,0.142371680799103,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.301445281105245,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.748953197024114,0,0.251308704225729,0,0,0.62336413367868,0.324482526135515,0,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0.268412837520744,0,0,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0.193952487167626,0.280543279561274,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.259229946583586,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0,0,0.209613162627982,0,0,0.412070114477788,0,0,0.760437899670719,0,0,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0.25384382367503,0,0,0,0,0,0.0985044823755635,0.818462086339379,0,0,1.24905288968973,0,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p@chr19:55985099..55985142,- | |||
}} |
Latest revision as of 09:02, 4 August 2015
Short description: | p@chr19:55985099..55985142, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:55985099..55985142, - |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.46e-30 | 3 |
CNS neuron (sensu Vertebrata) | 6.69e-27 | 23 |
neuroblast (sensu Vertebrata) | 6.69e-27 | 23 |
neuron | 1.01e-18 | 33 |
neuronal stem cell | 1.01e-18 | 33 |
neuroblast | 1.01e-18 | 33 |
electrically signaling cell | 1.01e-18 | 33 |
electrically responsive cell | 8.08e-16 | 39 |
electrically active cell | 8.08e-16 | 39 |
neural cell | 2.49e-14 | 43 |
ectodermal cell | 5.33e-14 | 44 |
neurectodermal cell | 5.33e-14 | 44 |
granule cell | 6.65e-14 | 3 |
raphe nuclei neuron | 7.72e-14 | 3 |
embryonic cell | 1.07e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
basal ganglion | 4.20e-20 | 8 |
nuclear complex of neuraxis | 4.20e-20 | 8 |
aggregate regional part of brain | 4.20e-20 | 8 |
collection of basal ganglia | 4.20e-20 | 8 |
cerebral subcortex | 4.20e-20 | 8 |
corpus striatum | 1.17e-18 | 5 |
striatum | 1.17e-18 | 5 |
ventral part of telencephalon | 1.17e-18 | 5 |
future corpus striatum | 1.17e-18 | 5 |
raphe nuclei | 7.72e-14 | 3 |
reticular formation | 7.72e-14 | 3 |
central nervous system | 2.51e-08 | 73 |
nervous system | 4.28e-08 | 75 |