FFCP PHASE1:Mm9::chr1:137268461..137268465,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:137268461..137268465,-|id=chr1:137268461..137268465,-|ontology_enrichment_celltype=CL:0000055!1.08e-20!50;CL:0000221!3.25e-19!44;CL:0000133!3.25e-19!44;CL:0002319!8.07e-19!43;CL:0000393!2.53e-15!39;CL:0000211!2.53e-15!39;CL:0000540!1.62e-12!33;CL:0000047!1.62e-12!33;CL:0000031!1.62e-12!33;CL:0000404!1.62e-12!33;CL:0002321!2.00e-12!70;CL:0000220!2.00e-12!70;CL:0000117!2.38e-09!23;CL:0000337!2.38e-09!23;CL:0000333!1.44e-07!10;CL:0000095!1.44e-07!10;CL:0000243!1.44e-07!10;CL:0000123!1.44e-07!10;CL:0000125!1.44e-07!10;CL:0000030!1.44e-07!10;CL:0000339!1.44e-07!10;CL:0002453!6.71e-07!8|ontology_enrichment_celltype_v019_2=CL:0000221,2.86e-24,44;CL:0000133,2.86e-24,44;CL:0002319,9.03e-24,43;CL:0002321,7.70e-20,70;CL:0000393,2.48e-19,39;CL:0000211,2.48e-19,39;CL:0000540,8.83e-16,33;CL:0000047,8.83e-16,33;CL:0000031,8.83e-16,33;CL:0000404,8.83e-16,33;CL:0000117,8.53e-12,23;CL:0000337,8.53e-12,23;CL:0000333,3.98e-09,10;CL:0000095,3.98e-09,10;CL:0000243,3.98e-09,10;CL:0000123,3.98e-09,10;CL:0000125,3.98e-09,10;CL:0000030,3.98e-09,10;CL:0000339,3.98e-09,10;CL:0002453,2.74e-08,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.97e-29!75;UBERON:0001016!4.97e-29!75;UBERON:0001017!4.97e-28!73;UBERON:0005743!4.97e-28!73;UBERON:0004121!1.46e-26!102;UBERON:0000924!1.46e-26!102;UBERON:0006601!1.46e-26!102;UBERON:0002346!3.72e-18!71;UBERON:0003075!3.72e-18!71;UBERON:0007284!3.72e-18!71;UBERON:0001049!1.33e-17!52;UBERON:0005068!1.33e-17!52;UBERON:0006241!1.33e-17!52;UBERON:0007135!1.33e-17!52;UBERON:0000033!2.27e-17!63;UBERON:0000955!1.85e-16!50;UBERON:0006238!1.85e-16!50;UBERON:0002616!3.73e-16!49;UBERON:0002020!1.93e-13!34;UBERON:0003080!7.35e-12!40;UBERON:0003056!1.20e-11!49;UBERON:0002780!1.31e-11!39;UBERON:0001890!1.31e-11!39;UBERON:0006240!1.31e-11!39;UBERON:0002791!8.24e-11!29;UBERON:0003528!8.24e-11!29;UBERON:0001893!8.24e-11!29;UBERON:0007811!2.48e-09!86;UBERON:0000153!4.21e-08!94;UBERON:0000956!1.59e-07!21;UBERON:0001869!1.59e-07!21;UBERON:0000203!1.59e-07!21;UBERON:0003076!8.29e-07!12;UBERON:0003057!8.29e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.60e-35,75;UBERON:0001017,1.53e-33,73;UBERON:0004121,1.98e-28,95;UBERON:0000924,1.98e-28,95;UBERON:0006601,1.98e-28,95;UBERON:0000073,3.40e-22,54;UBERON:0001049,1.54e-20,52;UBERON:0005068,1.54e-20,52;UBERON:0006241,1.54e-20,52;UBERON:0007135,1.54e-20,52;UBERON:0002346,6.31e-20,64;UBERON:0003075,6.31e-20,64;UBERON:0007284,6.31e-20,64;UBERON:0000955,4.18e-17,47;UBERON:0006238,4.18e-17,47;UBERON:0002020,5.92e-17,34;UBERON:0010371,8.14e-17,73;UBERON:0002616,9.92e-17,46;UBERON:0010314,1.41e-15,92;UBERON:0003528,1.27e-13,29;UBERON:0002791,1.27e-13,29;UBERON:0001893,1.27e-13,29;UBERON:0003080,1.96e-13,40;UBERON:0002780,4.05e-13,39;UBERON:0001890,4.05e-13,39;UBERON:0006240,4.05e-13,39;UBERON:0003056,5.96e-12,49;UBERON:0000956,1.81e-09,21;UBERON:0001869,1.81e-09,21;UBERON:0000203,1.81e-09,21;UBERON:0003076,3.58e-08,12;UBERON:0003057,3.58e-08,12;UBERON:0002619,5.76e-08,17;UBERON:0002021,3.33e-07,10;UBERON:0000411,3.33e-07,10;UBERON:0001950,3.33e-07,10|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29484089877886,6.48812359804893,5.32285581268876,10.1710874765245,50.799861436644,38.4450819785326,56.3846707315422,22.1178546168073,28.7505128729943,0,0,0.336093799142464,2.31533492432352,5.15760191889762,5.15672092277442,3.84401275633236,7.40587370980846,4.43681982454325,13.5537812827653,11.5608323494448,2.6996991518442,0.988866362566974,4.9733608046227,35.0532129306534,96.0545763303886,2.07379224616955,4.18518408828241,1.68259969081106,19.1386159550548,17.8903518170807,1.10241719293459,1.24599112323707,0,4.40463523997555,12.0026097800076,8.90917892886212,4.2203612073662,4.66586982372289,5.73004707612436,14.7966989470732,18.0084035210138,11.9182633265912,4.71405736757868,10.3931326983345,3.35519002485541,2.12033341332915,8.08615693142605,0.579728977403356,0,0,0,0,0,3.23022166303029,4.26075806445144,11.950156211732,4.59341446863442,3.66192891419369,5.13305909657271,0,14.2213340630666,4.32982082022428,4.81383744402687,7.07734223020697,0.68510327831436,0,0.148442139064825,1.56136794089522,1.82679286987285,1.38369298353635,1.3565037649736,1.52865319276416,0.251333182659351,0.494389935468748,0.289198713839823,1.76922110389975,2.10296904931632,1.54589062922275,4.363877278217,0,2.04946557908083,2.30391377494801,0,0,0,0,2.09706895166752,2.74500361691176,1.00523481690292,5.56237824615285,8.43861009190091,4.77912502486988,4.54275536589721,0.712875546952214,0.995255764880744,0.252722758433675,0.631325567659422,0.650602214813519,1.14951052216736,0.180062129805349,1.65775299619287,0.95251098811859,1.0249097622788,1.59292931751539,3.10444044886819,0.431135985865684,0.378212160335639,0.17595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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:137268461..137268465,- | |||
|description=CAGE_peak_at_chr1:137268461..137268465,- | |||
|id=chr1:137268461..137268465,- | |||
|ontology_enrichment_celltype=CL:0000055!1.08e-20!50;CL:0000221!3.25e-19!44;CL:0000133!3.25e-19!44;CL:0002319!8.07e-19!43;CL:0000393!2.53e-15!39;CL:0000211!2.53e-15!39;CL:0000540!1.62e-12!33;CL:0000047!1.62e-12!33;CL:0000031!1.62e-12!33;CL:0000404!1.62e-12!33;CL:0002321!2.00e-12!70;CL:0000220!2.00e-12!70;CL:0000117!2.38e-09!23;CL:0000337!2.38e-09!23;CL:0000333!1.44e-07!10;CL:0000095!1.44e-07!10;CL:0000243!1.44e-07!10;CL:0000123!1.44e-07!10;CL:0000125!1.44e-07!10;CL:0000030!1.44e-07!10;CL:0000339!1.44e-07!10;CL:0002453!6.71e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.86e-24,44;CL:0000133,2.86e-24,44;CL:0002319,9.03e-24,43;CL:0002321,7.70e-20,70;CL:0000393,2.48e-19,39;CL:0000211,2.48e-19,39;CL:0000540,8.83e-16,33;CL:0000047,8.83e-16,33;CL:0000031,8.83e-16,33;CL:0000404,8.83e-16,33;CL:0000117,8.53e-12,23;CL:0000337,8.53e-12,23;CL:0000333,3.98e-09,10;CL:0000095,3.98e-09,10;CL:0000243,3.98e-09,10;CL:0000123,3.98e-09,10;CL:0000125,3.98e-09,10;CL:0000030,3.98e-09,10;CL:0000339,3.98e-09,10;CL:0002453,2.74e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.97e-29!75;UBERON:0001016!4.97e-29!75;UBERON:0001017!4.97e-28!73;UBERON:0005743!4.97e-28!73;UBERON:0004121!1.46e-26!102;UBERON:0000924!1.46e-26!102;UBERON:0006601!1.46e-26!102;UBERON:0002346!3.72e-18!71;UBERON:0003075!3.72e-18!71;UBERON:0007284!3.72e-18!71;UBERON:0001049!1.33e-17!52;UBERON:0005068!1.33e-17!52;UBERON:0006241!1.33e-17!52;UBERON:0007135!1.33e-17!52;UBERON:0000033!2.27e-17!63;UBERON:0000955!1.85e-16!50;UBERON:0006238!1.85e-16!50;UBERON:0002616!3.73e-16!49;UBERON:0002020!1.93e-13!34;UBERON:0003080!7.35e-12!40;UBERON:0003056!1.20e-11!49;UBERON:0002780!1.31e-11!39;UBERON:0001890!1.31e-11!39;UBERON:0006240!1.31e-11!39;UBERON:0002791!8.24e-11!29;UBERON:0003528!8.24e-11!29;UBERON:0001893!8.24e-11!29;UBERON:0007811!2.48e-09!86;UBERON:0000153!4.21e-08!94;UBERON:0000956!1.59e-07!21;UBERON:0001869!1.59e-07!21;UBERON:0000203!1.59e-07!21;UBERON:0003076!8.29e-07!12;UBERON:0003057!8.29e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.60e-35,75;UBERON:0001017,1.53e-33,73;UBERON:0004121,1.98e-28,95;UBERON:0000924,1.98e-28,95;UBERON:0006601,1.98e-28,95;UBERON:0000073,3.40e-22,54;UBERON:0001049,1.54e-20,52;UBERON:0005068,1.54e-20,52;UBERON:0006241,1.54e-20,52;UBERON:0007135,1.54e-20,52;UBERON:0002346,6.31e-20,64;UBERON:0003075,6.31e-20,64;UBERON:0007284,6.31e-20,64;UBERON:0000955,4.18e-17,47;UBERON:0006238,4.18e-17,47;UBERON:0002020,5.92e-17,34;UBERON:0010371,8.14e-17,73;UBERON:0002616,9.92e-17,46;UBERON:0010314,1.41e-15,92;UBERON:0003528,1.27e-13,29;UBERON:0002791,1.27e-13,29;UBERON:0001893,1.27e-13,29;UBERON:0003080,1.96e-13,40;UBERON:0002780,4.05e-13,39;UBERON:0001890,4.05e-13,39;UBERON:0006240,4.05e-13,39;UBERON:0003056,5.96e-12,49;UBERON:0000956,1.81e-09,21;UBERON:0001869,1.81e-09,21;UBERON:0000203,1.81e-09,21;UBERON:0003076,3.58e-08,12;UBERON:0003057,3.58e-08,12;UBERON:0002619,5.76e-08,17;UBERON:0002021,3.33e-07,10;UBERON:0000411,3.33e-07,10;UBERON:0001950,3.33e-07,10 | |||
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29484089877886,6.48812359804893,5.32285581268876,10.1710874765245,50.799861436644,38.4450819785326,56.3846707315422,22.1178546168073,28.7505128729943,0,0,0.336093799142464,2.31533492432352,5.15760191889762,5.15672092277442,3.84401275633236,7.40587370980846,4.43681982454325,13.5537812827653,11.5608323494448,2.6996991518442,0.988866362566974,4.9733608046227,35.0532129306534,96.0545763303886,2.07379224616955,4.18518408828241,1.68259969081106,19.1386159550548,17.8903518170807,1.10241719293459,1.24599112323707,0,4.40463523997555,12.0026097800076,8.90917892886212,4.2203612073662,4.66586982372289,5.73004707612436,14.7966989470732,18.0084035210138,11.9182633265912,4.71405736757868,10.3931326983345,3.35519002485541,2.12033341332915,8.08615693142605,0.579728977403356,0,0,0,0,0,3.23022166303029,4.26075806445144,11.950156211732,4.59341446863442,3.66192891419369,5.13305909657271,0,14.2213340630666,4.32982082022428,4.81383744402687,7.07734223020697,0.68510327831436,0,0.148442139064825,1.56136794089522,1.82679286987285,1.38369298353635,1.3565037649736,1.52865319276416,0.251333182659351,0.494389935468748,0.289198713839823,1.76922110389975,2.10296904931632,1.54589062922275,4.363877278217,0,2.04946557908083,2.30391377494801,0,0,0,0,2.09706895166752,2.74500361691176,1.00523481690292,5.56237824615285,8.43861009190091,4.77912502486988,4.54275536589721,0.712875546952214,0.995255764880744,0.252722758433675,0.631325567659422,0.650602214813519,1.14951052216736,0.180062129805349,1.65775299619287,0.95251098811859,1.0249097622788,1.59292931751539,3.10444044886819,0.431135985865684,0.378212160335639,0.175951124163949,0.657587197282725,1.66828349535359,0,0.823128545631774,1.19420560091096,0,0,0,0.621377317606506,0.469052119962192,0.900310307305074,0.473489471170421,0.983821158737019,0.617068451549513,0.232533944750408,1.07309360559848,0.116765342367169,0.822799249567402,0.164167464079095,0.162137619091711,0.292399974850665,0.658650345873152,0.268412837520744,2.3131894342054,1.02904612379284,0.330418782983798,0,1.2797295032114,1.85789337488351,0.38660238396628,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,1.82797620175566,0,2.24016460629846,1.16371492300575,0.140271639780637,0.442655759869801,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0.393117990226406,0.449724224769707,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.184753190166605,0.757965647081939,0.162964976442026,1.18821560042632,0.469380496577004,0,0.238043640886014,0,0,0.664394068946325,0.637819074629948,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0.983528546038072,0,4.17431533968259,7.03270119553219,14.0984053023941,10.6037789425837,2.2085575359138,3.51394869866975,2.15423397732799,3.58453196928828,6.90675889655422,1.69845918473299,3.64329631507405,2.33804686329049,2.37172666767914,2.24924921495265,0.141940085208269,1.6025904330053,0.488660878060728,0.659880491890142,0,0.971122544619926,1.51161778482376,0.754420319023592,0,1.22974059177571,0,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,0,0.680879211507576,0.900305470156551,1.16422815404479,1.28602221018955,0.532020700926821,1.60531935841864,1.31639216481697,2.13125464380219,0.23467170806371,0.42366414172764,0.441056796109924,0.65954501176592,0.484393280087717,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,2.96680483216816,0,1.23832120777933,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.406638934253697,1.29606408986162,1.88179466413022,1.09181281873089,0.269728692769641,0.495920734352016,1.57053565190418,0,1.86401793926078,0,0.448549638131936,0.66183396182839,0.972255941720238,1.42075805825504,1.520605129417,0.821500670520278,0,0.104859344425711,0.241584120826006,1.44015003128933,0.632022241256357,1.21635129174099,1.1298205288131,0.389762468933385,0,0,0.360586348559907,0.295379054349154,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.116876902181569,1.58711268530648,0.221985953374065,0.448569283047378,0.335769232728157,0.19318959403219,0.563047426353546,0.36630324853453,0.214368379079066,31.5990425542279,3.3885110557024,5.06357760157895,4.01026859407578,6.35856774671644,5.48066015816514,7.55393897389701,7.42524750254986,8.10578165803597,4.53142408984205,6.73088405277366,0.726511433089237,0,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,1.33348036680969,1.44224540067226,1.60459604795908,1.01078884705519,0.25347929989024,0.188626341386076,1.12369808963859,1.28050304809739,1.32101578597911,1.42888107384922,0.695305955669133,0.77163688185482,0.824171801606613,1.32479028120958,2.05721551431249,0.70990322463735,0.476872379894642,1.88950341622027,0.941093804153306,1.4384483341585,2.0122077016005,0.789209134313529,0.135804113845862,2.24456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| |||
|short_description=p@chr1:137268461..137268465,- | |||
}} |
Latest revision as of 20:48, 4 August 2015
Short description: | p@chr1:137268461..137268465, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:137268461..137268465, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.86e-24 | 44 |
neurectodermal cell | 2.86e-24 | 44 |
neural cell | 9.03e-24 | 43 |
embryonic cell | 7.70e-20 | 70 |
electrically responsive cell | 2.48e-19 | 39 |
electrically active cell | 2.48e-19 | 39 |
neuron | 8.83e-16 | 33 |
neuronal stem cell | 8.83e-16 | 33 |
neuroblast | 8.83e-16 | 33 |
electrically signaling cell | 8.83e-16 | 33 |
CNS neuron (sensu Vertebrata) | 8.53e-12 | 23 |
neuroblast (sensu Vertebrata) | 8.53e-12 | 23 |
migratory neural crest cell | 3.98e-09 | 10 |
neuron associated cell | 3.98e-09 | 10 |
glial cell (sensu Vertebrata) | 3.98e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 3.98e-09 | 10 |
glial cell | 3.98e-09 | 10 |
glioblast | 3.98e-09 | 10 |
glioblast (sensu Vertebrata) | 3.98e-09 | 10 |
oligodendrocyte precursor cell | 2.74e-08 | 8 |