FFCP PHASE1:Mm9::chr1:140072490..140072513,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=785|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:140072490..140072513,-|id=chr1:140072490..140072513,-|ontology_enrichment_celltype=CL:0000084!2.52e-15!11;CL:0000827!2.52e-15!11;CL:0000791!8.11e-14!9;CL:0000789!8.11e-14!9;CL:0002420!8.11e-14!9;CL:0002419!8.11e-14!9;CL:0000790!8.11e-14!9;CL:0000838!8.69e-14!12;CL:0000542!1.73e-12!13;CL:0000051!1.73e-12!13;CL:0000624!2.16e-12!8;CL:0002031!5.81e-10!25;CL:0000893!6.85e-10!6;CL:0002489!6.85e-10!6;CL:0000898!6.85e-10!6;CL:0000809!6.85e-10!6;CL:0000810!6.85e-10!6;CL:0000895!6.85e-10!6;CL:0000808!6.85e-10!6;CL:0000894!6.85e-10!6;CL:0000806!6.85e-10!6;CL:0000807!6.85e-10!6;CL:0000805!6.85e-10!6;CL:0002425!6.85e-10!6;CL:0002436!6.85e-10!6;CL:0002427!6.85e-10!6;CL:0002428!6.85e-10!6;CL:0002429!6.85e-10!6;CL:0002433!6.85e-10!6;CL:0002431!6.85e-10!6;CL:0002432!6.85e-10!6;CL:0000738!7.57e-09!17;CL:0002087!7.57e-09!17;CL:0000988!7.55e-08!32;CL:0002032!7.55e-08!32;CL:0000037!7.55e-08!32;CL:0000566!7.55e-08!32;CL:0000837!7.55e-08!32|ontology_enrichment_celltype_v019_2=CL:0000791,3.65e-29,9;CL:0000789,3.65e-29,9;CL:0002420,3.65e-29,9;CL:0002419,3.65e-29,9;CL:0000790,3.65e-29,9;CL:0000624,6.09e-26,8;CL:0000084,1.34e-23,11;CL:0000827,1.34e-23,11;CL:0000838,1.64e-21,12;CL:0000893,2.68e-20,6;CL:0002489,2.68e-20,6;CL:0000898,2.68e-20,6;CL:0000809,2.68e-20,6;CL:0000810,2.68e-20,6;CL:0000895,2.68e-20,6;CL:0000808,2.68e-20,6;CL:0000894,2.68e-20,6;CL:0000806,2.68e-20,6;CL:0000807,2.68e-20,6;CL:0000805,2.68e-20,6;CL:0002425,2.68e-20,6;CL:0002436,2.68e-20,6;CL:0002427,2.68e-20,6;CL:0002428,2.68e-20,6;CL:0002429,2.68e-20,6;CL:0002433,2.68e-20,6;CL:0002431,2.68e-20,6;CL:0002432,2.68e-20,6;CL:0000542,9.62e-20,13;CL:0000051,9.62e-20,13;CL:0000738,9.48e-15,17;CL:0002087,9.48e-15,17;CL:0002031,1.05e-11,25;CL:0000988,9.19e-09,32;CL:0002032,9.19e-09,32;CL:0000037,9.19e-09,32;CL:0000837,9.19e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.25e-28!29;UBERON:0002370!1.56e-24!23;UBERON:0000974!1.56e-24!23;UBERON:0004807!1.56e-24!23;UBERON:0005058!1.56e-24!23;UBERON:0003351!1.56e-24!23;UBERON:0009113!1.56e-24!23;UBERON:0003295!1.56e-24!23;UBERON:0009722!1.56e-24!23;UBERON:0005562!1.56e-24!23;UBERON:0007690!1.56e-24!23;UBERON:0006562!3.14e-23!24;UBERON:0003408!3.14e-23!24;UBERON:0001557!3.14e-23!24;UBERON:0001042!3.14e-23!24;UBERON:0008814!3.14e-23!24;UBERON:0009145!3.14e-23!24;UBERON:0002390!1.21e-21!45;UBERON:0003061!1.21e-21!45;UBERON:0002193!1.79e-21!48;UBERON:0000072!6.67e-20!27;UBERON:0000065!6.17e-18!41;UBERON:0001004!2.55e-17!42;UBERON:0005057!1.46e-16!51;UBERON:0002405!4.28e-15!70;UBERON:0000063!7.26e-14!35;UBERON:0001041!1.16e-10!92;UBERON:0005911!3.27e-10!69;UBERON:0003081!5.49e-10!88;UBERON:0000077!1.30e-09!97;UBERON:0003929!2.55e-09!55;UBERON:0002368!8.72e-09!60;UBERON:0002530!1.90e-08!65;UBERON:0004921!1.55e-07!126;UBERON:0004185!1.55e-07!126;UBERON:0001007!2.91e-07!128;UBERON:0001555!2.91e-07!128;UBERON:0007026!2.91e-07!128;UBERON:0004119!5.34e-07!130;UBERON:0000925!5.34e-07!130;UBERON:0006595!5.34e-07!130;UBERON:0000949!6.35e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.68e-51,23;UBERON:0000974,8.68e-51,23;UBERON:0004807,8.68e-51,23;UBERON:0005058,8.68e-51,23;UBERON:0003351,8.68e-51,23;UBERON:0009113,8.68e-51,23;UBERON:0003295,8.68e-51,23;UBERON:0009722,8.68e-51,23;UBERON:0005562,8.68e-51,23;UBERON:0007690,8.68e-51,23;UBERON:0006562,1.61e-48,24;UBERON:0003408,1.61e-48,24;UBERON:0001557,1.61e-48,24;UBERON:0001042,1.61e-48,24;UBERON:0008814,1.61e-48,24;UBERON:0009145,1.61e-48,24;UBERON:0004177,1.06e-43,29;UBERON:0005057,1.06e-43,29;UBERON:0000072,1.01e-42,27;UBERON:0000077,1.48e-35,35;UBERON:0007811,4.05e-31,36;UBERON:0002193,2.23e-30,48;UBERON:0002405,2.23e-30,48;UBERON:0000065,8.95e-30,41;UBERON:0002390,1.30e-29,45;UBERON:0003061,1.30e-29,45;UBERON:0001004,5.66e-29,42;UBERON:0000153,1.91e-25,43;UBERON:0003929,3.05e-21,55;UBERON:0002368,3.81e-19,60;UBERON:0005911,6.53e-18,69;UBERON:0002530,2.27e-17,65;UBERON:0000490,4.78e-17,66;UBERON:0001041,1.67e-16,80;UBERON:0000949,2.69e-15,72;UBERON:0003081,2.33e-13,87;UBERON:0004921,2.58e-10,114;UBERON:0001007,4.61e-10,116;UBERON:0001555,4.61e-10,116;UBERON:0007026,4.61e-10,116;UBERON:0004119,8.07e-10,118;UBERON:0000925,8.07e-10,118;UBERON:0006595,8.07e-10,118;UBERON:0000926,1.51e-08,120;UBERON:0004120,1.51e-08,120;UBERON:0006603,1.51e-08,120;UBERON:0001048,3.92e-08,134|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,12.8117737158017,12.6394844213876,13.1837835533639,13.4017227112165,4.62241970814255,4.10875891369288,0.333109761815663,0.202475267389826,0,0.946386496074713,1.23402990245165,0,0.0850432901510698,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,6.5282592781021,12.0993767691287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.95557132388495,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0.438599962275997,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0.482443521363367,1.10851914099963,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0.491589944147214,0.863424909329478,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.136694227721025,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,10.1123558601017,0.202725215290164,2.87590680061516,13.6416864126685,11.4577085227188,13.9076948346885,11.418567704397,9.7475087935221,10.0966449948148,14.707913684415,10.6875756245051,11.1101984043318,11.0643617886379,14.0252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0.231867835620421|short_description=p@chr1:140072490..140072513,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=785 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:140072490..140072513,- | |||
|description=CAGE_peak_at_chr1:140072490..140072513,- | |||
|id=chr1:140072490..140072513,- | |||
|ontology_enrichment_celltype=CL:0000084!2.52e-15!11;CL:0000827!2.52e-15!11;CL:0000791!8.11e-14!9;CL:0000789!8.11e-14!9;CL:0002420!8.11e-14!9;CL:0002419!8.11e-14!9;CL:0000790!8.11e-14!9;CL:0000838!8.69e-14!12;CL:0000542!1.73e-12!13;CL:0000051!1.73e-12!13;CL:0000624!2.16e-12!8;CL:0002031!5.81e-10!25;CL:0000893!6.85e-10!6;CL:0002489!6.85e-10!6;CL:0000898!6.85e-10!6;CL:0000809!6.85e-10!6;CL:0000810!6.85e-10!6;CL:0000895!6.85e-10!6;CL:0000808!6.85e-10!6;CL:0000894!6.85e-10!6;CL:0000806!6.85e-10!6;CL:0000807!6.85e-10!6;CL:0000805!6.85e-10!6;CL:0002425!6.85e-10!6;CL:0002436!6.85e-10!6;CL:0002427!6.85e-10!6;CL:0002428!6.85e-10!6;CL:0002429!6.85e-10!6;CL:0002433!6.85e-10!6;CL:0002431!6.85e-10!6;CL:0002432!6.85e-10!6;CL:0000738!7.57e-09!17;CL:0002087!7.57e-09!17;CL:0000988!7.55e-08!32;CL:0002032!7.55e-08!32;CL:0000037!7.55e-08!32;CL:0000566!7.55e-08!32;CL:0000837!7.55e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.65e-29,9;CL:0000789,3.65e-29,9;CL:0002420,3.65e-29,9;CL:0002419,3.65e-29,9;CL:0000790,3.65e-29,9;CL:0000624,6.09e-26,8;CL:0000084,1.34e-23,11;CL:0000827,1.34e-23,11;CL:0000838,1.64e-21,12;CL:0000893,2.68e-20,6;CL:0002489,2.68e-20,6;CL:0000898,2.68e-20,6;CL:0000809,2.68e-20,6;CL:0000810,2.68e-20,6;CL:0000895,2.68e-20,6;CL:0000808,2.68e-20,6;CL:0000894,2.68e-20,6;CL:0000806,2.68e-20,6;CL:0000807,2.68e-20,6;CL:0000805,2.68e-20,6;CL:0002425,2.68e-20,6;CL:0002436,2.68e-20,6;CL:0002427,2.68e-20,6;CL:0002428,2.68e-20,6;CL:0002429,2.68e-20,6;CL:0002433,2.68e-20,6;CL:0002431,2.68e-20,6;CL:0002432,2.68e-20,6;CL:0000542,9.62e-20,13;CL:0000051,9.62e-20,13;CL:0000738,9.48e-15,17;CL:0002087,9.48e-15,17;CL:0002031,1.05e-11,25;CL:0000988,9.19e-09,32;CL:0002032,9.19e-09,32;CL:0000037,9.19e-09,32;CL:0000837,9.19e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.25e-28!29;UBERON:0002370!1.56e-24!23;UBERON:0000974!1.56e-24!23;UBERON:0004807!1.56e-24!23;UBERON:0005058!1.56e-24!23;UBERON:0003351!1.56e-24!23;UBERON:0009113!1.56e-24!23;UBERON:0003295!1.56e-24!23;UBERON:0009722!1.56e-24!23;UBERON:0005562!1.56e-24!23;UBERON:0007690!1.56e-24!23;UBERON:0006562!3.14e-23!24;UBERON:0003408!3.14e-23!24;UBERON:0001557!3.14e-23!24;UBERON:0001042!3.14e-23!24;UBERON:0008814!3.14e-23!24;UBERON:0009145!3.14e-23!24;UBERON:0002390!1.21e-21!45;UBERON:0003061!1.21e-21!45;UBERON:0002193!1.79e-21!48;UBERON:0000072!6.67e-20!27;UBERON:0000065!6.17e-18!41;UBERON:0001004!2.55e-17!42;UBERON:0005057!1.46e-16!51;UBERON:0002405!4.28e-15!70;UBERON:0000063!7.26e-14!35;UBERON:0001041!1.16e-10!92;UBERON:0005911!3.27e-10!69;UBERON:0003081!5.49e-10!88;UBERON:0000077!1.30e-09!97;UBERON:0003929!2.55e-09!55;UBERON:0002368!8.72e-09!60;UBERON:0002530!1.90e-08!65;UBERON:0004921!1.55e-07!126;UBERON:0004185!1.55e-07!126;UBERON:0001007!2.91e-07!128;UBERON:0001555!2.91e-07!128;UBERON:0007026!2.91e-07!128;UBERON:0004119!5.34e-07!130;UBERON:0000925!5.34e-07!130;UBERON:0006595!5.34e-07!130;UBERON:0000949!6.35e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.68e-51,23;UBERON:0000974,8.68e-51,23;UBERON:0004807,8.68e-51,23;UBERON:0005058,8.68e-51,23;UBERON:0003351,8.68e-51,23;UBERON:0009113,8.68e-51,23;UBERON:0003295,8.68e-51,23;UBERON:0009722,8.68e-51,23;UBERON:0005562,8.68e-51,23;UBERON:0007690,8.68e-51,23;UBERON:0006562,1.61e-48,24;UBERON:0003408,1.61e-48,24;UBERON:0001557,1.61e-48,24;UBERON:0001042,1.61e-48,24;UBERON:0008814,1.61e-48,24;UBERON:0009145,1.61e-48,24;UBERON:0004177,1.06e-43,29;UBERON:0005057,1.06e-43,29;UBERON:0000072,1.01e-42,27;UBERON:0000077,1.48e-35,35;UBERON:0007811,4.05e-31,36;UBERON:0002193,2.23e-30,48;UBERON:0002405,2.23e-30,48;UBERON:0000065,8.95e-30,41;UBERON:0002390,1.30e-29,45;UBERON:0003061,1.30e-29,45;UBERON:0001004,5.66e-29,42;UBERON:0000153,1.91e-25,43;UBERON:0003929,3.05e-21,55;UBERON:0002368,3.81e-19,60;UBERON:0005911,6.53e-18,69;UBERON:0002530,2.27e-17,65;UBERON:0000490,4.78e-17,66;UBERON:0001041,1.67e-16,80;UBERON:0000949,2.69e-15,72;UBERON:0003081,2.33e-13,87;UBERON:0004921,2.58e-10,114;UBERON:0001007,4.61e-10,116;UBERON:0001555,4.61e-10,116;UBERON:0007026,4.61e-10,116;UBERON:0004119,8.07e-10,118;UBERON:0000925,8.07e-10,118;UBERON:0006595,8.07e-10,118;UBERON:0000926,1.51e-08,120;UBERON:0004120,1.51e-08,120;UBERON:0006603,1.51e-08,120;UBERON:0001048,3.92e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,12.8117737158017,12.6394844213876,13.1837835533639,13.4017227112165,4.62241970814255,4.10875891369288,0.333109761815663,0.202475267389826,0,0.946386496074713,1.23402990245165,0,0.0850432901510698,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,6.5282592781021,12.0993767691287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.95557132388495,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0.438599962275997,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0.482443521363367,1.10851914099963,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0.491589944147214,0.863424909329478,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.136694227721025,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,10.1123558601017,0.202725215290164,2.87590680061516,13.6416864126685,11.4577085227188,13.9076948346885,11.418567704397,9.7475087935221,10.0966449948148,14.707913684415,10.6875756245051,11.1101984043318,11.0643617886379,14.0252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p@chr1:140072490..140072513,- | |||
}} |
Latest revision as of 22:27, 4 August 2015
Short description: | p@chr1:140072490..140072513, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:140072490..140072513, - |
Coexpression cluster: | MCL_coexpression_mm9:785 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data