FFCP PHASE1:Hg19::chr6:17706964..17706975,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8062 | |||
|TSSclassifier=strong | |||
|UniProt=P49790,Q4LE47 | |||
|association_with_transcript=-146bp_to_ENST00000430136,NM_005124,uc003ncd.1,uc010jpl.1,uc011dje.1_5end | |||
|cluster_id=chr6:17706964..17706975,- | |||
|coexpression_cluster_id=C119 | |||
|description=CAGE_peak_6_at_NUP153_5end | |||
|id=chr6:17706964..17706975,- | |||
|ontology_enrichment_celltype=CL:0000037!2.57e-30!172;CL:0000566!2.57e-30!172;CL:0000988!2.10e-28!182;CL:0002032!1.87e-26!165;CL:0000837!1.87e-26!165;CL:0000738!2.00e-23!140;CL:0002087!7.57e-18!119;CL:0002031!6.29e-17!124;CL:0000763!9.71e-14!112;CL:0000049!9.71e-14!112;CL:0000542!7.93e-13!53;CL:0000051!7.93e-13!53;CL:0000838!1.77e-12!52;CL:0000860!2.65e-08!45;CL:0000766!2.67e-08!76;CL:0000219!3.11e-08!390;CL:0002057!2.15e-07!42;CL:0000084!2.57e-07!25;CL:0000827!2.57e-07!25;CL:0000094!5.16e-07!8;CL:0000134!7.96e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.44e-19;8!CL:0000081;4.18e-17;11!CL:0000624;5.49e-15;6!CL:0000791;1.01e-14;18!CL:0000789;1.01e-14;18!CL:0002419;1.01e-14;18!CL:0000084;1.13e-11;25!CL:0000542;1.60e-09;53!CL:0000623;6.50e-09;3!CL:0000226;2.61e-08;3!CL:0000767;2.61e-08;3!CL:0000842;2.61e-08;3!CL:0000775;2.77e-08;3!CL:0000784;6.03e-08;3!CL:0000898;8.39e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.36e-29,168;CL:0000988,4.68e-28,177;CL:0000738,2.36e-24,136;CL:0002032,1.47e-22,161;CL:0000837,1.47e-22,161;CL:0000094,8.16e-20,8;CL:0000081,2.20e-17,11;CL:0000838,1.48e-15,52;CL:0000624,2.75e-15,6;CL:0000542,3.75e-15,53;CL:0000051,3.75e-15,53;CL:0000791,6.86e-15,18;CL:0000789,6.86e-15,18;CL:0002420,6.86e-15,18;CL:0002419,6.86e-15,18;CL:0000790,6.86e-15,18;CL:0002087,8.68e-14,115;CL:0000084,8.90e-12,25;CL:0000827,8.90e-12,25;CL:0002031,7.75e-11,120;CL:0000134,1.38e-09,354;CL:0000763,3.19e-09,108;CL:0000049,3.19e-09,108;CL:0002320,4.02e-09,361;CL:0000623,6.40e-09,3;CL:0000825,6.40e-09,3;CL:0000767,1.92e-08,3;CL:0000775,2.06e-08,3;CL:0000784,3.52e-08,3;CL:0000226,3.60e-08,3;CL:0000842,3.60e-08,3;CL:0000898,4.26e-08,3;CL:0000219,4.92e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000790;1.01e-14;18!CL:0000051;1.60e-09;53 | |||
|ontology_enrichment_disease=DOID:162!6.47e-13!235;DOID:14566!1.44e-11!239;DOID:2531!1.22e-08!51;DOID:0060083!1.22e-08!51;DOID:0050686!1.28e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.71e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0.547497700291537,0.502170558379211,0.458480434487708,0.821005894499457,1.02324015707783,3.14691421479123,2.68680578668049,2.63187409637329,0.919421224478927,0.30120591877825,0,1.78174561334694,0.853015394924529,0.880801318004542,0.553995408531877,1.40381113229099,2.38711957787437,0,0,0.257575567634187,0.726991193897824,0.377875943688809,1.21292030593908,0.464858073811369,2.05583944010913,0.619412741790207,0.575384784644301,0.768482119587302,0.47296445977717,0.689491361473237,0.645484683583826,0,0.564727018627814,0.545812300115692,0.449446968890169,1.53041946185451,0.320929027076094,0,0.659702600373432,1.59570926097305,2.13112375266347,1.16083695451434,0,0,0.75374599577023,0,0.434377689410233,0,0.736555271975129,0.316462387440884,0.633765858935825,0.637812899895131,0.628975936525128,0.786300418025466,0.450530678524519,0.16072558669708,0.855038231223746,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,3.98449078376614,2.93618594685469,2.6759125968766,2.64342657158052,2.24203425192614,0.263384084775077,5.90129310341499,11.7903228824749,6.37364646898479,0.167186495390678,2.60737813306872,1.4203434172042,3.89653456815823,0.557052284425868,2.3568472597987,0.443067789167242,1.08321545506006,1.66518715643378,1.30059347559878,1.31550323682941,1.38175008892924,0.289803085735052,0.889719378972363,0.535081656179426,0,0.906474741580529,1.91610246800961,2.06176467289578,0.759059076058509,0.95569624297229,1.30216690771284,0,0.301150238155546,0,1.24930726552346,0.236777252044017,0,9.67712367478716,12.5696892018248,10.5721814834443,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0,0,0,0.370784442784429,0.649094787309367,0.174129737299267,0.26591592103773,3.10037811596945,1.71598473234038,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0.367663080345869,0,0.267899184852239,0,0.337834441449967,0,0,0,5.27121669744253,3.87780264148325,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,1.18800285728205,0,0,0,0.336672227908132,0.250237039743928,0.554128230968366,0,0,0,0.567160915800105,0.538168907066586,0,0,0.300091096084402,0.206105058476878,0,0,0.843881661206331,0,0.757301322732344,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.169560592310488,0.773043412653187,0,0.573609190778008,0.121973706129595,0.927708378250397,0.348581828608555,0.414644220061482,0.252320850875628,1.09493207722749,0,0.643240938192885,0,0,0,0.473227200159376,0.337169380156203,0.964044119533928,0.220587945464788,0.435758888184812,1.18635309555548,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,3.97316789473185,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.702012795417713,0,0,0,0,0.447792613514241,0.290633938513962,0,0,0.088048434013226,0.414656231081544,0.144119953416961,0.37872730027914,0.63497894292169,0.381988425558278,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0.112131084345361,0,0.36669142910475,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.716243852959582,0.448340575974109,8.27529192848094,9.9188684435378,9.75407075726088,0.508189248444927,0,0,0,0.637938751653163,1.49801404789436,11.966458368161,5.38740167466846,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0.157702415033935,0,0.601892199455438,0,0,0,0.368738337083406,0,0,0,2.06768026122887,2.15714200818617,3.20182673410333,0.606255142892519,0,0.907170879989041,0.496215615637554,0.306923946576125,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.462629081407967,0.355123450626254,0.739144404124282,0,0,0.725156697549733,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.316654886678627,0,0,1.0795795805107,0,0,0,0.254876273045038,0,0.223874754722178,0.877039506583738,0.522870902049801,0,0,0,0.206082023295445,0.915694648183434,0.330037999682352,0,0.650060246036521,0,0,0.154048617114644,0,0.551346289938122,0,0,0.681813019328807,0.356128142586949,0.165284915360978,0.192190067365106,0.765676274967505,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.430234056612155,0,0,0,0,0,0,0,0.288666338176536,0,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.320472213382419,0,1.71528151186722,0.743212700502875,0.432807638929335,1.20941133692304,0.637705090915289,0.997896857164083,0.957526850661834,0.423347165447766,0,0.280797178113459,1.14117339516596,0.78339947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| |||
|short_description=p6@NUP153 | |||
}} |
Latest revision as of 00:58, 17 September 2015
Short description: | p6@NUP153 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NUP153_5end |
Coexpression cluster: | C119_CD4_CD8_Natural_Neutrophils_CD14_Peripheral_CD19 |
Association with transcript: | -146bp_to_ENST00000430136, NM_005124, uc003ncd.1, uc010jpl.1, uc011dje.1_5end |
EntrezGene: | NUP153 |
HGNC: | 8062 |
UniProt: | P49790Q4LE47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.71e-08 | 371 |