FFCP PHASE1:Mm9::chr1:66109380..66109430,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=458|UniProt=|association_with_transcript=-108bp_to_ENSMUST00000118496_5end|description=CAGE_peak_2_at_ENSMUST00000118496_5end|id=chr1:66109380..66109430,+|ontology_enrichment_celltype=CL:0000988!1.43e-25!32;CL:0002032!1.43e-25!32;CL:0000037!1.43e-25!32;CL:0000566!1.43e-25!32;CL:0000837!1.43e-25!32;CL:0002031!2.76e-22!25;CL:0002320!1.18e-21!46;CL:0000134!1.18e-21!46;CL:0000219!5.71e-21!54;CL:0000838!4.05e-18!12;CL:0000738!2.24e-17!17;CL:0002087!2.24e-17!17;CL:0000542!1.59e-16!13;CL:0000051!1.59e-16!13;CL:0000791!1.65e-16!9;CL:0000789!1.65e-16!9;CL:0002420!1.65e-16!9;CL:0002419!1.65e-16!9;CL:0000790!1.65e-16!9;CL:0000084!4.32e-16!11;CL:0000827!4.32e-16!11;CL:0000063!5.22e-16!66;CL:0000624!1.76e-14!8;CL:0000034!1.04e-12!97;CL:0000144!1.67e-12!121;CL:0000012!1.67e-12!121;CL:0000049!6.44e-11!19;CL:0000723!1.09e-10!91;CL:0000048!1.09e-10!91;CL:0000893!1.17e-10!6;CL:0002489!1.17e-10!6;CL:0000898!1.17e-10!6;CL:0000809!1.17e-10!6;CL:0000810!1.17e-10!6;CL:0000895!1.17e-10!6;CL:0000808!1.17e-10!6;CL:0000894!1.17e-10!6;CL:0000806!1.17e-10!6;CL:0000807!1.17e-10!6;CL:0000805!1.17e-10!6;CL:0002425!1.17e-10!6;CL:0002436!1.17e-10!6;CL:0002427!1.17e-10!6;CL:0002428!1.17e-10!6;CL:0002429!1.17e-10!6;CL:0002433!1.17e-10!6;CL:0002431!1.17e-10!6;CL:0002432!1.17e-10!6;CL:0002371!4.72e-10!118;CL:0000553!1.43e-08!6;CL:0000556!1.43e-08!6;CL:0000548!7.80e-08!115;CL:0000004!7.80e-08!115;CL:0000255!7.80e-08!115;CL:0000763!3.56e-07!16;CL:0000839!5.39e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,7.42e-20,32;CL:0002032,7.42e-20,32;CL:0000037,7.42e-20,32;CL:0000837,7.42e-20,32;CL:0002031,1.28e-18,25;CL:0002320,1.01e-17,46;CL:0000134,1.01e-17,46;CL:0000219,7.06e-17,54;CL:0000738,8.06e-15,17;CL:0002087,8.06e-15,17;CL:0000838,2.23e-12,12;CL:0000791,1.26e-11,9;CL:0000789,1.26e-11,9;CL:0002420,1.26e-11,9;CL:0002419,1.26e-11,9;CL:0000790,1.26e-11,9;CL:0000542,2.20e-11,13;CL:0000051,2.20e-11,13;CL:0000034,9.15e-11,97;CL:0000723,3.00e-10,91;CL:0000048,3.00e-10,91;CL:0000049,8.02e-10,19;CL:0000084,1.80e-09,11;CL:0000827,1.80e-09,11;CL:0002476,5.17e-09,2;CL:0000763,6.94e-09,16;CL:0000624,1.48e-08,8;CL:0000839,7.65e-08,13;CL:0000553,6.80e-07,6;CL:0000556,6.80e-07,6|ontology_enrichment_disease=DOID:0060100!8.48e-07!3;DOID:4045!8.48e-07!3|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.18e-21!46;UBERON:0002193!7.35e-09!48;UBERON:0002390!1.75e-07!45;UBERON:0003061!1.75e-07!45;UBERON:0002371!3.56e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.01e-17,46;UBERON:0002371,6.94e-09,16;UBERON:0002204,3.40e-07,32|phase1_expression=0,0,0,1.81478526784098,0,0,0,1.54947988129892,0.140788722151667,0.234064526321993,0.513653904676515,0.0797721589953364,3.25281386869291,1.83582845079895,0,0.404950534779652,0.699561878128147,3.94327706697797,3.83920414096069,2.54633791078818,0,0,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,1.25559489221072,3.1253413780952,0.523523743973798,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,18.456086666351,12.3311564141929,11.7632829699862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4387976733305,0.68014404096107,1.15945795480671,0,0,0,0,0,0,0,0.779358013808606,2.82671659608272,0,2.56652954828636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,4.52373851817817,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,0.839708713941948,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p2@ENSMUST00000118496}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=458 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-108bp_to_ENSMUST00000118496_5end | |||
|cluster_id=chr1:66109380..66109430,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000118496_5end | |||
|id=chr1:66109380..66109430,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.43e-25!32;CL:0002032!1.43e-25!32;CL:0000037!1.43e-25!32;CL:0000566!1.43e-25!32;CL:0000837!1.43e-25!32;CL:0002031!2.76e-22!25;CL:0002320!1.18e-21!46;CL:0000134!1.18e-21!46;CL:0000219!5.71e-21!54;CL:0000838!4.05e-18!12;CL:0000738!2.24e-17!17;CL:0002087!2.24e-17!17;CL:0000542!1.59e-16!13;CL:0000051!1.59e-16!13;CL:0000791!1.65e-16!9;CL:0000789!1.65e-16!9;CL:0002420!1.65e-16!9;CL:0002419!1.65e-16!9;CL:0000790!1.65e-16!9;CL:0000084!4.32e-16!11;CL:0000827!4.32e-16!11;CL:0000063!5.22e-16!66;CL:0000624!1.76e-14!8;CL:0000034!1.04e-12!97;CL:0000144!1.67e-12!121;CL:0000012!1.67e-12!121;CL:0000049!6.44e-11!19;CL:0000723!1.09e-10!91;CL:0000048!1.09e-10!91;CL:0000893!1.17e-10!6;CL:0002489!1.17e-10!6;CL:0000898!1.17e-10!6;CL:0000809!1.17e-10!6;CL:0000810!1.17e-10!6;CL:0000895!1.17e-10!6;CL:0000808!1.17e-10!6;CL:0000894!1.17e-10!6;CL:0000806!1.17e-10!6;CL:0000807!1.17e-10!6;CL:0000805!1.17e-10!6;CL:0002425!1.17e-10!6;CL:0002436!1.17e-10!6;CL:0002427!1.17e-10!6;CL:0002428!1.17e-10!6;CL:0002429!1.17e-10!6;CL:0002433!1.17e-10!6;CL:0002431!1.17e-10!6;CL:0002432!1.17e-10!6;CL:0002371!4.72e-10!118;CL:0000553!1.43e-08!6;CL:0000556!1.43e-08!6;CL:0000548!7.80e-08!115;CL:0000004!7.80e-08!115;CL:0000255!7.80e-08!115;CL:0000763!3.56e-07!16;CL:0000839!5.39e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.42e-20,32;CL:0002032,7.42e-20,32;CL:0000037,7.42e-20,32;CL:0000837,7.42e-20,32;CL:0002031,1.28e-18,25;CL:0002320,1.01e-17,46;CL:0000134,1.01e-17,46;CL:0000219,7.06e-17,54;CL:0000738,8.06e-15,17;CL:0002087,8.06e-15,17;CL:0000838,2.23e-12,12;CL:0000791,1.26e-11,9;CL:0000789,1.26e-11,9;CL:0002420,1.26e-11,9;CL:0002419,1.26e-11,9;CL:0000790,1.26e-11,9;CL:0000542,2.20e-11,13;CL:0000051,2.20e-11,13;CL:0000034,9.15e-11,97;CL:0000723,3.00e-10,91;CL:0000048,3.00e-10,91;CL:0000049,8.02e-10,19;CL:0000084,1.80e-09,11;CL:0000827,1.80e-09,11;CL:0002476,5.17e-09,2;CL:0000763,6.94e-09,16;CL:0000624,1.48e-08,8;CL:0000839,7.65e-08,13;CL:0000553,6.80e-07,6;CL:0000556,6.80e-07,6 | |||
|ontology_enrichment_disease=DOID:0060100!8.48e-07!3;DOID:4045!8.48e-07!3 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.18e-21!46;UBERON:0002193!7.35e-09!48;UBERON:0002390!1.75e-07!45;UBERON:0003061!1.75e-07!45;UBERON:0002371!3.56e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.01e-17,46;UBERON:0002371,6.94e-09,16;UBERON:0002204,3.40e-07,32 | |||
|phase1_expression=0,0,0,1.81478526784098,0,0,0,1.54947988129892,0.140788722151667,0.234064526321993,0.513653904676515,0.0797721589953364,3.25281386869291,1.83582845079895,0,0.404950534779652,0.699561878128147,3.94327706697797,3.83920414096069,2.54633791078818,0,0,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,1.25559489221072,3.1253413780952,0.523523743973798,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,18.456086666351,12.3311564141929,11.7632829699862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4387976733305,0.68014404096107,1.15945795480671,0,0,0,0,0,0,0,0.779358013808606,2.82671659608272,0,2.56652954828636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,4.52373851817817,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,0.839708713941948,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p2@ENSMUST00000118496 | |||
}} |
Latest revision as of 21:29, 5 August 2015
Short description: | p2@ENSMUST00000118496 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000118496_5end |
Coexpression cluster: | MCL_coexpression_mm9:458 |
Association with transcript: | -108bp_to_ENSMUST00000118496_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.42e-20 | 32 |
hematopoietic oligopotent progenitor cell | 7.42e-20 | 32 |
hematopoietic stem cell | 7.42e-20 | 32 |
hematopoietic multipotent progenitor cell | 7.42e-20 | 32 |
hematopoietic lineage restricted progenitor cell | 1.28e-18 | 25 |
connective tissue cell | 1.01e-17 | 46 |
mesenchymal cell | 1.01e-17 | 46 |
motile cell | 7.06e-17 | 54 |
leukocyte | 8.06e-15 | 17 |
nongranular leukocyte | 8.06e-15 | 17 |
lymphoid lineage restricted progenitor cell | 2.23e-12 | 12 |
mature alpha-beta T cell | 1.26e-11 | 9 |
alpha-beta T cell | 1.26e-11 | 9 |
immature T cell | 1.26e-11 | 9 |
mature T cell | 1.26e-11 | 9 |
immature alpha-beta T cell | 1.26e-11 | 9 |
lymphocyte | 2.20e-11 | 13 |
common lymphoid progenitor | 2.20e-11 | 13 |
stem cell | 9.15e-11 | 97 |
somatic stem cell | 3.00e-10 | 91 |
multi fate stem cell | 3.00e-10 | 91 |
common myeloid progenitor | 8.02e-10 | 19 |
T cell | 1.80e-09 | 11 |
pro-T cell | 1.80e-09 | 11 |
bone marrow macrophage | 5.17e-09 | 2 |
myeloid cell | 6.94e-09 | 16 |
CD4-positive, alpha-beta T cell | 1.48e-08 | 8 |
myeloid lineage restricted progenitor cell | 7.65e-08 | 13 |
megakaryocyte progenitor cell | 6.80e-07 | 6 |
megakaryocyte | 6.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.01e-17 | 46 |
bone marrow | 6.94e-09 | 16 |
musculoskeletal system | 3.40e-07 | 32 |