FFCP PHASE1:Mm9::chr1:9838456..9838479,+: Difference between revisions
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{{FFCP|EntrezGene=170755|HGNC=|MCL_coexpression_id=33|UniProt=Q9ERE3|association_with_transcript=0bp_to_ENSMUST00000097826,uc007agy.1_5end|description=CAGE_peak_4_at_Sgk3_5end|id=chr1:9838456..9838479,+|ontology_enrichment_celltype=CL:0000838!3.84e-08!12;CL:0000084!6.37e-08!11;CL:0000827!6.37e-08!11;CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13|ontology_enrichment_celltype_v019_2=CL:0000084,6.86e-16,11;CL:0000827,6.86e-16,11;CL:0000838,2.31e-14,12;CL:0000542,4.52e-13,13;CL:0000051,4.52e-13,13;CL:0000791,1.87e-12,9;CL:0000789,1.87e-12,9;CL:0002420,1.87e-12,9;CL:0002419,1.87e-12,9;CL:0000790,1.87e-12,9;CL:0000624,9.96e-11,8;CL:0000738,1.94e-09,17;CL:0002087,1.94e-09,17;CL:0002031,2.91e-08,25;CL:0000893,1.55e-07,6;CL:0002489,1.55e-07,6;CL:0000898,1.55e-07,6;CL:0000809,1.55e-07,6;CL:0000810,1.55e-07,6;CL:0000895,1.55e-07,6;CL:0000808,1.55e-07,6;CL:0000894,1.55e-07,6;CL:0000806,1.55e-07,6;CL:0000807,1.55e-07,6;CL:0000805,1.55e-07,6;CL:0002425,1.55e-07,6;CL:0002436,1.55e-07,6;CL:0002427,1.55e-07,6;CL:0002428,1.55e-07,6;CL:0002429,1.55e-07,6;CL:0002433,1.55e-07,6;CL:0002431,1.55e-07,6;CL:0002432,1.55e-07,6;CL:0000988,6.37e-07,32;CL:0002032,6.37e-07,32;CL:0000037,6.37e-07,32;CL:0000837,6.37e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.49e-10!29;UBERON:0002370!3.42e-09!23;UBERON:0000974!3.42e-09!23;UBERON:0004807!3.42e-09!23;UBERON:0005058!3.42e-09!23;UBERON:0003351!3.42e-09!23;UBERON:0009113!3.42e-09!23;UBERON:0003295!3.42e-09!23;UBERON:0009722!3.42e-09!23;UBERON:0005562!3.42e-09!23;UBERON:0007690!3.42e-09!23;UBERON:0006562!2.46e-08!24;UBERON:0003408!2.46e-08!24;UBERON:0001557!2.46e-08!24;UBERON:0001042!2.46e-08!24;UBERON:0008814!2.46e-08!24;UBERON:0009145!2.46e-08!24;UBERON:0000077!1.36e-07!97;UBERON:0003886!4.02e-07!38;UBERON:0002193!6.27e-07!48;UBERON:0002390!6.36e-07!45;UBERON:0003061!6.36e-07!45;UBERON:0002323!8.25e-07!37;UBERON:0004458!8.25e-07!37|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.50e-20,23;UBERON:0000974,1.50e-20,23;UBERON:0004807,1.50e-20,23;UBERON:0005058,1.50e-20,23;UBERON:0003351,1.50e-20,23;UBERON:0009113,1.50e-20,23;UBERON:0003295,1.50e-20,23;UBERON:0009722,1.50e-20,23;UBERON:0005562,1.50e-20,23;UBERON:0007690,1.50e-20,23;UBERON:0006562,1.71e-19,24;UBERON:0003408,1.71e-19,24;UBERON:0001557,1.71e-19,24;UBERON:0001042,1.71e-19,24;UBERON:0008814,1.71e-19,24;UBERON:0009145,1.71e-19,24;UBERON:0000077,8.42e-17,35;UBERON:0000072,8.57e-17,27;UBERON:0004177,2.63e-15,29;UBERON:0005057,2.63e-15,29;UBERON:0007811,1.99e-11,36;UBERON:0002193,6.68e-11,48;UBERON:0002405,6.68e-11,48;UBERON:0002390,1.34e-10,45;UBERON:0003061,1.34e-10,45;UBERON:0000065,1.74e-09,41;UBERON:0001004,3.74e-09,42;UBERON:0000153,7.72e-09,43;UBERON:0000949,2.20e-08,72;UBERON:0003929,1.15e-07,55;UBERON:0000926,7.72e-07,120;UBERON:0004120,7.72e-07,120;UBERON:0006603,7.72e-07,120|phase1_expression=0,0,0,0,0,0.839396359559449,0.700837921786577,4.13194635013044,2.39340827657833,2.80877431586392,1.02730780935303,0.558405112967355,16.0928686135333,7.60557501045277,0.666219523631325,0.809901069559304,0.699561878128147,1.57731082679119,2.33094537129756,0,0.340173160604279,4.86525660884338,12.5375898786689,0.319984845586813,0,0,0,0.215471232685889,0.380046838912748,0,0.443461021310609,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,7.97898356212479,9.41062637598899,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0.919218786610021,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0.0755715601067855,1.44932244350839,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0,0,0.45673551887624,4.14300613835475,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0,0.23517741427141,0,13.8429181931249,1.15679485535929,0,0.647067399789637,0,0,1.86391761218122,0,0.41889341362691,1.02182822083437,0.718890747035522,1.79970819298022,0.508280908292259,0.299581278809645,0,0.251308704225729,0.695297280769106,0.511430914660661,0,0.324482526135515,0.407357455401265,0,0.758168275301024,0,0,0,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.187403449119458,0.517406741478031,0.431135985865684,0.189106080167819,0,0.43839146485515,0,0.348252166522167,0,0.59710280045548,0.702213187313235,0.51469581422943,0,0,0,0.36012412292203,0.473489471170421,0.196764231747404,0,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0,0,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.605050573870028,0.889512175379481,0.380451252225118,0.949058123089023,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0.189667900953082,0.799739588268102,0,0.610953983535943,0.193952487167626,0.210407459670956,0.379419222745544,0.147610147979602,0.31399745568275,0,0.296452627087149,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0.763877555344259,0,0,1.09824565275233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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170755 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ERE3 | |||
|association_with_transcript=0bp_to_ENSMUST00000097826,uc007agy.1_5end | |||
|cluster_id=chr1:9838456..9838479,+ | |||
|description=CAGE_peak_4_at_Sgk3_5end | |||
|id=chr1:9838456..9838479,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.84e-08!12;CL:0000084!6.37e-08!11;CL:0000827!6.37e-08!11;CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.86e-16,11;CL:0000827,6.86e-16,11;CL:0000838,2.31e-14,12;CL:0000542,4.52e-13,13;CL:0000051,4.52e-13,13;CL:0000791,1.87e-12,9;CL:0000789,1.87e-12,9;CL:0002420,1.87e-12,9;CL:0002419,1.87e-12,9;CL:0000790,1.87e-12,9;CL:0000624,9.96e-11,8;CL:0000738,1.94e-09,17;CL:0002087,1.94e-09,17;CL:0002031,2.91e-08,25;CL:0000893,1.55e-07,6;CL:0002489,1.55e-07,6;CL:0000898,1.55e-07,6;CL:0000809,1.55e-07,6;CL:0000810,1.55e-07,6;CL:0000895,1.55e-07,6;CL:0000808,1.55e-07,6;CL:0000894,1.55e-07,6;CL:0000806,1.55e-07,6;CL:0000807,1.55e-07,6;CL:0000805,1.55e-07,6;CL:0002425,1.55e-07,6;CL:0002436,1.55e-07,6;CL:0002427,1.55e-07,6;CL:0002428,1.55e-07,6;CL:0002429,1.55e-07,6;CL:0002433,1.55e-07,6;CL:0002431,1.55e-07,6;CL:0002432,1.55e-07,6;CL:0000988,6.37e-07,32;CL:0002032,6.37e-07,32;CL:0000037,6.37e-07,32;CL:0000837,6.37e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.49e-10!29;UBERON:0002370!3.42e-09!23;UBERON:0000974!3.42e-09!23;UBERON:0004807!3.42e-09!23;UBERON:0005058!3.42e-09!23;UBERON:0003351!3.42e-09!23;UBERON:0009113!3.42e-09!23;UBERON:0003295!3.42e-09!23;UBERON:0009722!3.42e-09!23;UBERON:0005562!3.42e-09!23;UBERON:0007690!3.42e-09!23;UBERON:0006562!2.46e-08!24;UBERON:0003408!2.46e-08!24;UBERON:0001557!2.46e-08!24;UBERON:0001042!2.46e-08!24;UBERON:0008814!2.46e-08!24;UBERON:0009145!2.46e-08!24;UBERON:0000077!1.36e-07!97;UBERON:0003886!4.02e-07!38;UBERON:0002193!6.27e-07!48;UBERON:0002390!6.36e-07!45;UBERON:0003061!6.36e-07!45;UBERON:0002323!8.25e-07!37;UBERON:0004458!8.25e-07!37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.50e-20,23;UBERON:0000974,1.50e-20,23;UBERON:0004807,1.50e-20,23;UBERON:0005058,1.50e-20,23;UBERON:0003351,1.50e-20,23;UBERON:0009113,1.50e-20,23;UBERON:0003295,1.50e-20,23;UBERON:0009722,1.50e-20,23;UBERON:0005562,1.50e-20,23;UBERON:0007690,1.50e-20,23;UBERON:0006562,1.71e-19,24;UBERON:0003408,1.71e-19,24;UBERON:0001557,1.71e-19,24;UBERON:0001042,1.71e-19,24;UBERON:0008814,1.71e-19,24;UBERON:0009145,1.71e-19,24;UBERON:0000077,8.42e-17,35;UBERON:0000072,8.57e-17,27;UBERON:0004177,2.63e-15,29;UBERON:0005057,2.63e-15,29;UBERON:0007811,1.99e-11,36;UBERON:0002193,6.68e-11,48;UBERON:0002405,6.68e-11,48;UBERON:0002390,1.34e-10,45;UBERON:0003061,1.34e-10,45;UBERON:0000065,1.74e-09,41;UBERON:0001004,3.74e-09,42;UBERON:0000153,7.72e-09,43;UBERON:0000949,2.20e-08,72;UBERON:0003929,1.15e-07,55;UBERON:0000926,7.72e-07,120;UBERON:0004120,7.72e-07,120;UBERON:0006603,7.72e-07,120 | |||
|phase1_expression=0,0,0,0,0,0.839396359559449,0.700837921786577,4.13194635013044,2.39340827657833,2.80877431586392,1.02730780935303,0.558405112967355,16.0928686135333,7.60557501045277,0.666219523631325,0.809901069559304,0.699561878128147,1.57731082679119,2.33094537129756,0,0.340173160604279,4.86525660884338,12.5375898786689,0.319984845586813,0,0,0,0.215471232685889,0.380046838912748,0,0.443461021310609,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,7.97898356212479,9.41062637598899,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0.919218786610021,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0.0755715601067855,1.44932244350839,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0,0,0.45673551887624,4.14300613835475,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0,0.23517741427141,0,13.8429181931249,1.15679485535929,0,0.647067399789637,0,0,1.86391761218122,0,0.41889341362691,1.02182822083437,0.718890747035522,1.79970819298022,0.508280908292259,0.299581278809645,0,0.251308704225729,0.695297280769106,0.511430914660661,0,0.324482526135515,0.407357455401265,0,0.758168275301024,0,0,0,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.187403449119458,0.517406741478031,0.431135985865684,0.189106080167819,0,0.43839146485515,0,0.348252166522167,0,0.59710280045548,0.702213187313235,0.51469581422943,0,0,0,0.36012412292203,0.473489471170421,0.196764231747404,0,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0,0,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.605050573870028,0.889512175379481,0.380451252225118,0.949058123089023,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0.189667900953082,0.799739588268102,0,0.610953983535943,0.193952487167626,0.210407459670956,0.379419222745544,0.147610147979602,0.31399745568275,0,0.296452627087149,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0.763877555344259,0,0,1.09824565275233,0,0,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.739012760666419,0.568474235311454,0.325929952884052,0,0.234690248288502,0.335012514883631,0.476087281772027,0.975668239288994,0,0.44292937929755,0.159454768657487,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0.659880491890142,0,0.485561272309963,0.302323556964751,0.754420319023592,0.590603785761546,0.614870295887855,1.03371317267288,1.09060118843252,1.06949213515416,0.316036757935816,2.10837217149998,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0,0.532020700926821,0,0.164549020602121,0.304464949114599,2.11204537257339,1.90648863777438,0.661585194164886,2.96795255294664,0.807322133479528,2.41251699712623,4.29740438411291,5.9090723908222,0.291480836629851,0,0.341741761595705,0.619160603889667,0.555583582109135,0.376736914009382,0.546776910884101,0.915112692826091,1.35982743995084,0.69975726161829,0.690999869022119,0,0.158167996790568,0,0.648032044930808,0.418176592028937,0,0.269728692769641,0.0826534557253359,0.785267825952089,0,0,1.69107881605257,1.34564891439581,1.98550188548517,0.972255941720238,0.516639293910924,0.506868376472335,0.352071715937262,2.21347454234715,1.15345278868282,0.966336483304024,1.15212002503146,10.7443781013581,0.405450430580328,0.513554785824136,1.55904987573354,3.40150721768215,4.56967115996909,4.56742708175882,6.4983391956814,7.57248374611107,5.56309688581499,7.9652686258104,11.1101984043318,10.7757262637169,12.6227054356094,0,0,0.179427713218951,0.503653849092235,0.19318959403219,2.25218970541418,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.900642406448441,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0.735374033800057,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.320125762024346,0.287177344778066,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.470546902076653,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0.474540072496697,0.197008964751127,1.22769312950907,0,0.192906610981141,0,0.467863216890817,0.429742108096597,0,1.54413993383661,0.231867835620421 | |||
|short_description=p4@Sgk3 | |||
}} |
Latest revision as of 20:34, 1 October 2015
Short description: | p4@Sgk3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sgk3_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000097826, uc007agy.1_5end |
EntrezGene: | Sgk3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.50e-20 | 23 |
neck | 1.50e-20 | 23 |
respiratory system epithelium | 1.50e-20 | 23 |
hemolymphoid system gland | 1.50e-20 | 23 |
pharyngeal epithelium | 1.50e-20 | 23 |
thymic region | 1.50e-20 | 23 |
pharyngeal gland | 1.50e-20 | 23 |
entire pharyngeal arch endoderm | 1.50e-20 | 23 |
thymus primordium | 1.50e-20 | 23 |
early pharyngeal endoderm | 1.50e-20 | 23 |
pharynx | 1.71e-19 | 24 |
gland of gut | 1.71e-19 | 24 |
upper respiratory tract | 1.71e-19 | 24 |
chordate pharynx | 1.71e-19 | 24 |
pharyngeal arch system | 1.71e-19 | 24 |
pharyngeal region of foregut | 1.71e-19 | 24 |
mixed endoderm/mesoderm-derived structure | 8.42e-17 | 35 |
segment of respiratory tract | 8.57e-17 | 27 |
hemopoietic organ | 2.63e-15 | 29 |
immune organ | 2.63e-15 | 29 |
craniocervical region | 1.99e-11 | 36 |
hemolymphoid system | 6.68e-11 | 48 |
immune system | 6.68e-11 | 48 |
hematopoietic system | 1.34e-10 | 45 |
blood island | 1.34e-10 | 45 |
respiratory tract | 1.74e-09 | 41 |
respiratory system | 3.74e-09 | 42 |
anterior region of body | 7.72e-09 | 43 |
endocrine system | 2.20e-08 | 72 |
gut epithelium | 1.15e-07 | 55 |
mesoderm | 7.72e-07 | 120 |
mesoderm-derived structure | 7.72e-07 | 120 |
presumptive mesoderm | 7.72e-07 | 120 |