FFCP PHASE1:Mm9::chr2:103810521..103810531,+: Difference between revisions
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{{FFCP|EntrezGene=16909|HGNC=|MCL_coexpression_id=1141|UniProt=P25801,A2BHP3,Q544Z2|association_with_transcript=77bp_to_ENSMUST00000040619,NM_008505,uc012cal.1_5end|description=CAGE_peak_14_at_Lmo2_5end|id=chr2:103810521..103810531,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,7.21e-17,19;CL:0002320,5.45e-11,46;CL:0000134,5.45e-11,46;CL:0002027,5.56e-10,3;CL:0002006,5.56e-10,3;CL:0002024,5.56e-10,3;CL:0000988,7.94e-10,32;CL:0002032,7.94e-10,32;CL:0000037,7.94e-10,32;CL:0000837,7.94e-10,32;CL:0000219,3.13e-09,54;CL:0000034,5.62e-09,97;CL:0000213,8.96e-08,1;CL:0002078,8.96e-08,1;CL:0000115,8.96e-08,1;CL:0002262,8.96e-08,1;CL:1000398,8.96e-08,1;CL:0000763,6.30e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.30e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.45e-11,46;UBERON:0002371,1.79e-10,16;UBERON:0002394,8.96e-08,1;UBERON:0001281,8.96e-08,1;UBERON:0000353,8.96e-08,1;UBERON:0003497,8.96e-08,1;UBERON:0003909,8.96e-08,1;UBERON:0003928,8.96e-08,1;UBERON:0003835,8.96e-08,1;UBERON:0003513,8.96e-08,1;UBERON:0001280,8.96e-08,1;UBERON:0004647,8.96e-08,1;UBERON:0002294,8.96e-08,1;UBERON:0001173,8.96e-08,1;UBERON:0004912,8.96e-08,1;UBERON:0005171,8.96e-08,1;UBERON:0001474,1.32e-07,22;UBERON:0004765,1.32e-07,22;UBERON:0001434,1.32e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,3.49780939064073,0.630924330716475,0.959801035240171,0.84877930359606,0.0850432901510698,0.297872853602656,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0.528990979272033,0.633831403506179,0,0,2.2497492932035,0.988866362566974,0.7104801149461,0.299600110518405,0,0.103689612308478,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0,0.294628585473668,0.284743361598206,0,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0.884610551949874,0.161766849947409,0,0,0,0,0,0,3.35482348616577,1.79970819298022,1.39777249780371,0,0.915001205637253,0.125654352112864,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,0,0.621377317606506,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.316182685621286,0.147610147979602,0,0,0,0.83422552858047,0.589676985339609,0.899448449539415,1.21716072833102,0.964708639009667,0.763877555344259,0.287696137450811,0.486405680325106,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0.327726629431476,0,0.578596234326046,0,1.08781136763742,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.428674070063185,0.177340233642274,0,0.329098041204242,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0.854354403989263,0.206386867963223,0.740778109478847,0.753473828018764,0.820165366326151,0.228778173206523,3.56954702987096,5.03825228365169,4.00779924032829,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.290692833264657,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.492522411877817,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0|short_description=p14@Lmo2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16909 | |||
|HGNC= | |||
|MCL_coexpression_id=1141 | |||
|TSSclassifier=NA | |||
|UniProt=P25801,A2BHP3,Q544Z2 | |||
|association_with_transcript=77bp_to_ENSMUST00000040619,NM_008505,uc012cal.1_5end | |||
|cluster_id=chr2:103810521..103810531,+ | |||
|description=CAGE_peak_14_at_Lmo2_5end | |||
|id=chr2:103810521..103810531,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,7.21e-17,19;CL:0002320,5.45e-11,46;CL:0000134,5.45e-11,46;CL:0002027,5.56e-10,3;CL:0002006,5.56e-10,3;CL:0002024,5.56e-10,3;CL:0000988,7.94e-10,32;CL:0002032,7.94e-10,32;CL:0000037,7.94e-10,32;CL:0000837,7.94e-10,32;CL:0000219,3.13e-09,54;CL:0000034,5.62e-09,97;CL:0000213,8.96e-08,1;CL:0002078,8.96e-08,1;CL:0000115,8.96e-08,1;CL:0002262,8.96e-08,1;CL:1000398,8.96e-08,1;CL:0000763,6.30e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.30e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.45e-11,46;UBERON:0002371,1.79e-10,16;UBERON:0002394,8.96e-08,1;UBERON:0001281,8.96e-08,1;UBERON:0000353,8.96e-08,1;UBERON:0003497,8.96e-08,1;UBERON:0003909,8.96e-08,1;UBERON:0003928,8.96e-08,1;UBERON:0003835,8.96e-08,1;UBERON:0003513,8.96e-08,1;UBERON:0001280,8.96e-08,1;UBERON:0004647,8.96e-08,1;UBERON:0002294,8.96e-08,1;UBERON:0001173,8.96e-08,1;UBERON:0004912,8.96e-08,1;UBERON:0005171,8.96e-08,1;UBERON:0001474,1.32e-07,22;UBERON:0004765,1.32e-07,22;UBERON:0001434,1.32e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,3.49780939064073,0.630924330716475,0.959801035240171,0.84877930359606,0.0850432901510698,0.297872853602656,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0.528990979272033,0.633831403506179,0,0,2.2497492932035,0.988866362566974,0.7104801149461,0.299600110518405,0,0.103689612308478,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0,0.294628585473668,0.284743361598206,0,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0.884610551949874,0.161766849947409,0,0,0,0,0,0,3.35482348616577,1.79970819298022,1.39777249780371,0,0.915001205637253,0.125654352112864,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,0,0.621377317606506,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.316182685621286,0.147610147979602,0,0,0,0.83422552858047,0.589676985339609,0.899448449539415,1.21716072833102,0.964708639009667,0.763877555344259,0.287696137450811,0.486405680325106,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0.327726629431476,0,0.578596234326046,0,1.08781136763742,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.428674070063185,0.177340233642274,0,0.329098041204242,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0.854354403989263,0.206386867963223,0.740778109478847,0.753473828018764,0.820165366326151,0.228778173206523,3.56954702987096,5.03825228365169,4.00779924032829,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.290692833264657,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.492522411877817,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p14@Lmo2 | |||
}} |
Latest revision as of 21:57, 1 October 2015
Short description: | p14@Lmo2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Lmo2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1141 |
Association with transcript: | 77bp_to_ENSMUST00000040619, NM_008505, uc012cal.1_5end |
EntrezGene: | Lmo2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 7.21e-17 | 19 |
connective tissue cell | 5.45e-11 | 46 |
mesenchymal cell | 5.45e-11 | 46 |
CD9-positive, CD41-positive megakaryocyte cell | 5.56e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.56e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.56e-10 | 3 |
hematopoietic cell | 7.94e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.94e-10 | 32 |
hematopoietic stem cell | 7.94e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.94e-10 | 32 |
motile cell | 3.13e-09 | 54 |
stem cell | 5.62e-09 | 97 |
lining cell | 8.96e-08 | 1 |
meso-epithelial cell | 8.96e-08 | 1 |
endothelial cell | 8.96e-08 | 1 |
endothelial cell of sinusoid | 8.96e-08 | 1 |
endothelial cell of hepatic sinusoid | 8.96e-08 | 1 |
myeloid cell | 6.30e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.45e-11 | 46 |
bone marrow | 1.79e-10 | 16 |
bile duct | 8.96e-08 | 1 |
hepatic sinusoid | 8.96e-08 | 1 |
parenchyma | 8.96e-08 | 1 |
abdomen blood vessel | 8.96e-08 | 1 |
sinusoid | 8.96e-08 | 1 |
digestive system duct | 8.96e-08 | 1 |
abdominal segment blood vessel | 8.96e-08 | 1 |
trunk blood vessel | 8.96e-08 | 1 |
liver parenchyma | 8.96e-08 | 1 |
liver lobule | 8.96e-08 | 1 |
biliary system | 8.96e-08 | 1 |
biliary tree | 8.96e-08 | 1 |
biliary bud | 8.96e-08 | 1 |
hepatic duct | 8.96e-08 | 1 |
bone element | 1.32e-07 | 22 |
skeletal element | 1.32e-07 | 22 |
skeletal system | 1.32e-07 | 22 |