FFCP PHASE1:Mm9::chr2:25316453..25316479,-: Difference between revisions
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{{FFCP|EntrezGene=227622|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000123986,ENSMUST00000133919_5end|description=CAGE_peak_1_at_BC029214_5end|id=chr2:25316453..25316479,-|ontology_enrichment_celltype=CL:0000117!6.13e-07!23;CL:0000337!6.13e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.13e-07,23;CL:0000337,6.13e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.36e-15!52;UBERON:0005068!6.36e-15!52;UBERON:0006241!6.36e-15!52;UBERON:0007135!6.36e-15!52;UBERON:0001017!4.76e-14!73;UBERON:0005743!4.76e-14!73;UBERON:0002616!4.94e-14!49;UBERON:0000955!5.06e-14!50;UBERON:0006238!5.06e-14!50;UBERON:0000073!1.64e-12!75;UBERON:0001016!1.64e-12!75;UBERON:0007811!2.84e-12!86;UBERON:0002020!7.82e-12!34;UBERON:0003080!6.94e-11!40;UBERON:0000064!9.49e-11!99;UBERON:0002780!1.32e-10!39;UBERON:0001890!1.32e-10!39;UBERON:0006240!1.32e-10!39;UBERON:0002791!4.85e-10!29;UBERON:0003528!4.85e-10!29;UBERON:0001893!4.85e-10!29;UBERON:0000033!6.14e-10!63;UBERON:0000153!9.71e-10!94;UBERON:0002346!1.66e-08!71;UBERON:0003075!1.66e-08!71;UBERON:0007284!1.66e-08!71;UBERON:0003056!1.40e-07!49;UBERON:0004121!2.80e-07!102;UBERON:0000924!2.80e-07!102;UBERON:0006601!2.80e-07!102;UBERON:0002619!3.15e-07!17;UBERON:0000956!3.76e-07!21;UBERON:0001869!3.76e-07!21;UBERON:0000203!3.76e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.00e-16,54;UBERON:0001049,6.36e-15,52;UBERON:0005068,6.36e-15,52;UBERON:0006241,6.36e-15,52;UBERON:0007135,6.36e-15,52;UBERON:0001017,4.76e-14,73;UBERON:0002616,4.36e-13,46;UBERON:0000955,4.49e-13,47;UBERON:0006238,4.49e-13,47;UBERON:0001016,1.64e-12,75;UBERON:0002020,7.82e-12,34;UBERON:0003080,6.94e-11,40;UBERON:0002780,1.32e-10,39;UBERON:0001890,1.32e-10,39;UBERON:0006240,1.32e-10,39;UBERON:0003528,4.85e-10,29;UBERON:0002791,4.85e-10,29;UBERON:0001893,4.85e-10,29;UBERON:0002346,7.80e-10,64;UBERON:0003075,7.80e-10,64;UBERON:0007284,7.80e-10,64;UBERON:0004121,3.98e-08,95;UBERON:0000924,3.98e-08,95;UBERON:0006601,3.98e-08,95;UBERON:0010371,1.11e-07,73;UBERON:0003056,1.40e-07,49;UBERON:0002619,3.15e-07,17;UBERON:0000956,3.76e-07,21;UBERON:0001869,3.76e-07,21;UBERON:0000203,3.76e-07,21|phase1_expression=12.4916100741739,32.4547129104606,32.7599452360466,28.1291716515352,30.5546395267272,18.9703577260435,18.6890112476421,45.3222865279933,11.5446752164367,25.2789688427753,7.0199366972457,8.93448180747768,40.2321715338333,51.3157762199515,6.99530499812892,8.30148596298286,5.59649502502517,26.9720151381293,28.3826877563879,20.3707032863054,14.1171861650776,29.390121555462,24.5527801790599,17.4391740844813,23.3997466688513,24.6919744569459,17.6612418425221,26.0720191549926,19.3823887845501,14.3657173963161,27.7163138319131,14.6057054895715,17.8368788399525,0,8.37669697278696,8.97667084935859,8.16677425049476,49.3867324269551,35.9414258480948,41.8818995179039,42.940898626264,66.2554120409692,48.0655249500842,21.150665419897,19.4643707941468,8.62669735159903,43.0315239391422,30.9595722060234,26.8017142936056,29.7477745583654,25.6175151574413,24.4379359420452,31.0397821206812,26.8383992544197,21.5100031451177,7.71778308107841,7.73640287834643,8.76642556871652,23.6710259205729,31.739458756322,27.8885817542719,13.8926258148344,23.1216646988896,6.74924787961049,8.89979726310277,8.5257613793532,9.58720353658895,25.7426264565442,10.8874092923902,12.6905582031789,13.0401476037857,29.4220513935918,27.8294361599033,16.1687854963739,11.6931474642248,21.1420320920305,25.3266526298594,21.1960981221412,20.8904885228491,23.6076455037047,28.2696818731446,22.9201883044974,24.2889209131201,26.449842671489,22.0029476798607,20.6240009831567,21.9252388430619,22.3679334990361,5.07365495332333,3.24957708459178,10.4351215932604,10.3250865237766,10.1995700056163,14.5719861742211,12.3457519315057,8.96053774194671,11.2355536105401,8.52151612890289,9.35229616570328,6.71345191569646,14.084341977668,6.41632387071589,0,0,6.27824018932521,8.36087556067825,8.08839112023653,10.5049169341535,15.018397251536,12.0238132642508,6.59244241711316,10.6562917409249,8.07154240396205,8.59119051149949,11.8764594207062,11.4356598110005,28.6746162571874,20.3885093257075,9.73071607144862,6.30890714794896,5.52103796150984,4.363877278217,7.45567044872489,25.7647101370161,38.3287473468623,16.860165643767,16.7741174308288,13.7977628128484,15.1213570216947,21.2702707954848,21.0450277296568,32.418822845119,27.1165939499951,26.8501230196847,26.1812936145046,28.8789448260609,10.3876151127323,16.2973131499222,43.468314450592,17.2562321826909,3.77349284591841,6.20735681970377,6.66229880279792,6.63101198477146,9.72921937863988,10.5053250633577,9.46387418053261,12.4177617954728,4.095791865724,5.8622884852024,4.92663147659057,9.64461222681329,10.0097009721215,10.7958171621872,6.1734640922383,6.17006227137329,10.5331978096985,11.8380037272769,13.6398479709884,4.97101854085205,7.73935997937617,6.66229627405755,7.57583153872673,8.46086196513836,11.2614992407786,9.30135779001631,6.70683503499048,16.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227622 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000123986,ENSMUST00000133919_5end | |||
|cluster_id=chr2:25316453..25316479,- | |||
|description=CAGE_peak_1_at_BC029214_5end | |||
|id=chr2:25316453..25316479,- | |||
|ontology_enrichment_celltype=CL:0000117!6.13e-07!23;CL:0000337!6.13e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.13e-07,23;CL:0000337,6.13e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.36e-15!52;UBERON:0005068!6.36e-15!52;UBERON:0006241!6.36e-15!52;UBERON:0007135!6.36e-15!52;UBERON:0001017!4.76e-14!73;UBERON:0005743!4.76e-14!73;UBERON:0002616!4.94e-14!49;UBERON:0000955!5.06e-14!50;UBERON:0006238!5.06e-14!50;UBERON:0000073!1.64e-12!75;UBERON:0001016!1.64e-12!75;UBERON:0007811!2.84e-12!86;UBERON:0002020!7.82e-12!34;UBERON:0003080!6.94e-11!40;UBERON:0000064!9.49e-11!99;UBERON:0002780!1.32e-10!39;UBERON:0001890!1.32e-10!39;UBERON:0006240!1.32e-10!39;UBERON:0002791!4.85e-10!29;UBERON:0003528!4.85e-10!29;UBERON:0001893!4.85e-10!29;UBERON:0000033!6.14e-10!63;UBERON:0000153!9.71e-10!94;UBERON:0002346!1.66e-08!71;UBERON:0003075!1.66e-08!71;UBERON:0007284!1.66e-08!71;UBERON:0003056!1.40e-07!49;UBERON:0004121!2.80e-07!102;UBERON:0000924!2.80e-07!102;UBERON:0006601!2.80e-07!102;UBERON:0002619!3.15e-07!17;UBERON:0000956!3.76e-07!21;UBERON:0001869!3.76e-07!21;UBERON:0000203!3.76e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.00e-16,54;UBERON:0001049,6.36e-15,52;UBERON:0005068,6.36e-15,52;UBERON:0006241,6.36e-15,52;UBERON:0007135,6.36e-15,52;UBERON:0001017,4.76e-14,73;UBERON:0002616,4.36e-13,46;UBERON:0000955,4.49e-13,47;UBERON:0006238,4.49e-13,47;UBERON:0001016,1.64e-12,75;UBERON:0002020,7.82e-12,34;UBERON:0003080,6.94e-11,40;UBERON:0002780,1.32e-10,39;UBERON:0001890,1.32e-10,39;UBERON:0006240,1.32e-10,39;UBERON:0003528,4.85e-10,29;UBERON:0002791,4.85e-10,29;UBERON:0001893,4.85e-10,29;UBERON:0002346,7.80e-10,64;UBERON:0003075,7.80e-10,64;UBERON:0007284,7.80e-10,64;UBERON:0004121,3.98e-08,95;UBERON:0000924,3.98e-08,95;UBERON:0006601,3.98e-08,95;UBERON:0010371,1.11e-07,73;UBERON:0003056,1.40e-07,49;UBERON:0002619,3.15e-07,17;UBERON:0000956,3.76e-07,21;UBERON:0001869,3.76e-07,21;UBERON:0000203,3.76e-07,21 | |||
|phase1_expression=12.4916100741739,32.4547129104606,32.7599452360466,28.1291716515352,30.5546395267272,18.9703577260435,18.6890112476421,45.3222865279933,11.5446752164367,25.2789688427753,7.0199366972457,8.93448180747768,40.2321715338333,51.3157762199515,6.99530499812892,8.30148596298286,5.59649502502517,26.9720151381293,28.3826877563879,20.3707032863054,14.1171861650776,29.390121555462,24.5527801790599,17.4391740844813,23.3997466688513,24.6919744569459,17.6612418425221,26.0720191549926,19.3823887845501,14.3657173963161,27.7163138319131,14.6057054895715,17.8368788399525,0,8.37669697278696,8.97667084935859,8.16677425049476,49.3867324269551,35.9414258480948,41.8818995179039,42.940898626264,66.2554120409692,48.0655249500842,21.150665419897,19.4643707941468,8.62669735159903,43.0315239391422,30.9595722060234,26.8017142936056,29.7477745583654,25.6175151574413,24.4379359420452,31.0397821206812,26.8383992544197,21.5100031451177,7.71778308107841,7.73640287834643,8.76642556871652,23.6710259205729,31.739458756322,27.8885817542719,13.8926258148344,23.1216646988896,6.74924787961049,8.89979726310277,8.5257613793532,9.58720353658895,25.7426264565442,10.8874092923902,12.6905582031789,13.0401476037857,29.4220513935918,27.8294361599033,16.1687854963739,11.6931474642248,21.1420320920305,25.3266526298594,21.1960981221412,20.8904885228491,23.6076455037047,28.2696818731446,22.9201883044974,24.2889209131201,26.449842671489,22.0029476798607,20.6240009831567,21.9252388430619,22.3679334990361,5.07365495332333,3.24957708459178,10.4351215932604,10.3250865237766,10.1995700056163,14.5719861742211,12.3457519315057,8.96053774194671,11.2355536105401,8.52151612890289,9.35229616570328,6.71345191569646,14.084341977668,6.41632387071589,0,0,6.27824018932521,8.36087556067825,8.08839112023653,10.5049169341535,15.018397251536,12.0238132642508,6.59244241711316,10.6562917409249,8.07154240396205,8.59119051149949,11.8764594207062,11.4356598110005,28.6746162571874,20.3885093257075,9.73071607144862,6.30890714794896,5.52103796150984,4.363877278217,7.45567044872489,25.7647101370161,38.3287473468623,16.860165643767,16.7741174308288,13.7977628128484,15.1213570216947,21.2702707954848,21.0450277296568,32.418822845119,27.1165939499951,26.8501230196847,26.1812936145046,28.8789448260609,10.3876151127323,16.2973131499222,43.468314450592,17.2562321826909,3.77349284591841,6.20735681970377,6.66229880279792,6.63101198477146,9.72921937863988,10.5053250633577,9.46387418053261,12.4177617954728,4.095791865724,5.8622884852024,4.92663147659057,9.64461222681329,10.0097009721215,10.7958171621872,6.1734640922383,6.17006227137329,10.5331978096985,11.8380037272769,13.6398479709884,4.97101854085205,7.73935997937617,6.66229627405755,7.57583153872673,8.46086196513836,11.2614992407786,9.30135779001631,6.70683503499048,16.4639132737709,8.88623189532794,8.37254066803386,6.48550476366846,7.30999937126662,6.14740322814942,8.32079796314305,20.8187049078486,19.0373532901676,43.6152793538613,13.7514294665043,5.75878276445132,3.94802342162745,7.98978260196979,10.0841762311671,8.67274370994994,11.7939888189787,16.1339880925134,18.7756808385372,16.5881237808178,16.1154742353332,15.0122347081723,18.8752075817387,11.6714546932335,20.5115511451998,6.82804443431094,4.68418901699888,6.76246414038483,7.73875045812194,8.92181440971078,8.62670584650918,11.5090497566148,8.85660887877613,8.32093257559286,14.1906738510071,13.0439155918346,2.8363667971736,4.32429789249047,3.37293168577281,3.85434230638156,6.51178331331525,7.38414970166117,8.34318798607351,8.91743747262695,7.13859674289012,2.87536413054709,10.4199465347181,7.17686648163489,12.6289438973556,15.6075749764064,15.4381926836277,15.7040211641614,4.35830247072115,4.56301934037672,5.43184274480602,5.63256595892405,6.365237782789,7.14130922658041,12.6836871107569,9.77337893458384,8.19419351700467,10.3645599627367,9.17634562408133,9.67035898449015,12.0058718622655,7.53956419696361,5.4390568381871,7.37646409528554,11.8652800911035,16.215609588767,13.7137673312878,7.37707254195039,6.05930225290495,10.7272794601527,3.90438744296638,6.67812532971677,5.9742199488138,7.35235624471901,8.20921939287614,9.71545684019746,11.9824901743638,12.6492088942888,13.8168166061377,6.52924391958036,10.6839362200353,13.0309567482861,13.0326397148303,26.5490276679926,6.06951590387454,5.44182402536552,17.1630622577867,19.489924930131,19.3684143204674,20.9326917466259,13.8142817201452,11.0514187299264,19.9103157499564,10.5418608574999,18.5643977846736,23.8307724027652,7.92268813737765,13.4533031134065,11.1455258216428,10.8177542521787,12.1290795969408,15.1385098953951,31.0554248096891,10.7948985709307,9.95610733059955,15.4369878638473,8.73897140589844,9.04200789497071,5.42816324353403,8.11731939221328,6.72977688954751,13.9910801582328,13.1651964427462,11.1066072518604,5.98521917093345,6.11141940320049,6.96963290917357,6.28793447516716,10.7525741407066,22.7771096191766,24.9113585136111,25.7051951276228,20.0480829783174,6.32671987162271,5.48962561242491,9.93649135560572,11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| |||
|short_description=p1@BC029214 | |||
}} |
Latest revision as of 10:16, 26 September 2015
Short description: | p1@BC029214 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC029214_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000123986, ENSMUST00000133919_5end |
EntrezGene: | BC029214 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.13e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.13e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.00e-16 | 54 |
neural tube | 6.36e-15 | 52 |
neural rod | 6.36e-15 | 52 |
future spinal cord | 6.36e-15 | 52 |
neural keel | 6.36e-15 | 52 |
central nervous system | 4.76e-14 | 73 |
regional part of brain | 4.36e-13 | 46 |
brain | 4.49e-13 | 47 |
future brain | 4.49e-13 | 47 |
nervous system | 1.64e-12 | 75 |
gray matter | 7.82e-12 | 34 |
anterior neural tube | 6.94e-11 | 40 |
regional part of forebrain | 1.32e-10 | 39 |
forebrain | 1.32e-10 | 39 |
future forebrain | 1.32e-10 | 39 |
brain grey matter | 4.85e-10 | 29 |
regional part of telencephalon | 4.85e-10 | 29 |
telencephalon | 4.85e-10 | 29 |
neurectoderm | 7.80e-10 | 64 |
neural plate | 7.80e-10 | 64 |
presumptive neural plate | 7.80e-10 | 64 |
ectoderm-derived structure | 3.98e-08 | 95 |
ectoderm | 3.98e-08 | 95 |
presumptive ectoderm | 3.98e-08 | 95 |
ecto-epithelium | 1.11e-07 | 73 |
pre-chordal neural plate | 1.40e-07 | 49 |
regional part of cerebral cortex | 3.15e-07 | 17 |
cerebral cortex | 3.76e-07 | 21 |
cerebral hemisphere | 3.76e-07 | 21 |
pallium | 3.76e-07 | 21 |