FFCP PHASE1:Hg19::chr7:29954723..29954724,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:29954723..29954724,+ | |||
|coexpression_cluster_id=C2892 | |||
|description=CAGE_peak_at_chr7:29954723..29954724,+ | |||
|id=chr7:29954723..29954724,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.69e-07;6!CL:0000404;2.69e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.71e-09,8;CL:0000540,2.37e-07,6;CL:0000031,2.37e-07,6;CL:0000404,2.37e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.04e-13;82!CL:0000031;2.69e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.26e-48!115;UBERON:0001049!1.01e-35!57;UBERON:0005068!1.01e-35!57;UBERON:0006241!1.01e-35!57;UBERON:0007135!1.01e-35!57;UBERON:0005743!2.88e-33!86;UBERON:0001017!3.94e-33!82;UBERON:0000073!5.79e-32!94;UBERON:0001016!5.79e-32!94;UBERON:0002780!2.66e-31!41;UBERON:0001890!2.66e-31!41;UBERON:0006240!2.66e-31!41;UBERON:0003080!4.79e-30!42;UBERON:0002346!4.81e-30!90;UBERON:0003075!5.43e-30!86;UBERON:0007284!5.43e-30!86;UBERON:0002616!9.83e-29!59;UBERON:0001893!6.78e-27!34;UBERON:0002020!1.43e-26!34;UBERON:0003528!1.43e-26!34;UBERON:0002791!3.42e-26!33;UBERON:0001869!7.64e-26!32;UBERON:0000955!3.32e-25!69;UBERON:0006238!3.32e-25!69;UBERON:0003056!2.09e-23!61;UBERON:0000924!8.54e-23!173;UBERON:0006601!8.54e-23!173;UBERON:0004121!2.16e-22!169;UBERON:0000956!3.04e-20!25;UBERON:0000203!3.04e-20!25;UBERON:0002619!3.11e-19!22;UBERON:0000033!2.53e-18!123;UBERON:0000153!3.31e-18!129;UBERON:0007811!3.31e-18!129;UBERON:0001950!1.62e-17!20;UBERON:0000064!8.98e-11!219;UBERON:0000062!6.99e-09!511;UBERON:0000922!1.12e-08!612;UBERON:0002420!1.72e-08!9;UBERON:0007245!1.72e-08!9;UBERON:0010009!1.72e-08!9;UBERON:0010011!1.72e-08!9;UBERON:0000454!1.72e-08!9;UBERON:0000481!3.02e-08!347;UBERON:0000475!5.19e-08!365;UBERON:0002308!9.48e-08!9;UBERON:0000125!9.48e-08!9;UBERON:0001871!1.57e-07!7;UBERON:0000468!2.27e-07!659;UBERON:0003076!3.80e-07!15;UBERON:0003057!3.80e-07!15;UBERON:0009663!7.43e-07!7;UBERON:0002050!9.56e-07!605;UBERON:0005423!9.56e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.24e-31;32!UBERON:0002791;2.18e-31;32!UBERON:0001893;2.50e-31;34!UBERON:0002780;4.39e-31;41!UBERON:0001890;4.39e-31;41!UBERON:0003528;5.34e-31;34!UBERON:0002020;5.34e-31;34!UBERON:0002619;3.24e-27;22!UBERON:0000956;6.69e-27;25!UBERON:0000203;6.69e-27;25!UBERON:0000073;1.86e-26;53!UBERON:0002616;1.86e-26;53!UBERON:0001950;1.02e-24;20!UBERON:0000955;1.96e-17;68!UBERON:0001017;8.44e-17;75!UBERON:0007023;1.03e-16;114!UBERON:0001016;4.28e-15;83!UBERON:0002420;1.34e-11;9!UBERON:0007245;1.34e-11;9!UBERON:0010009;1.34e-11;9!UBERON:0010011;1.34e-11;9!UBERON:0000454;1.34e-11;9!UBERON:0000125;1.66e-10;9!UBERON:0002308;1.66e-10;9!UBERON:0000922;7.65e-10;49!UBERON:0009663;3.15e-09;7!UBERON:0001871;4.35e-09;6!UBERON:0000200;3.90e-08;6!UBERON:0011216;5.64e-08;132!UBERON:0001894;1.34e-07;7!UBERON:0000349;1.44e-07;5!UBERON:0002021;2.35e-07;5!UBERON:0001872;3.07e-07;5!UBERON:0003135;3.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.07e-62,114;UBERON:0001049,5.54e-49,56;UBERON:0005068,5.54e-49,56;UBERON:0006241,5.54e-49,56;UBERON:0007135,5.54e-49,56;UBERON:0001017,4.55e-48,81;UBERON:0000073,3.46e-46,53;UBERON:0002616,3.46e-46,53;UBERON:0001016,9.36e-44,89;UBERON:0002780,4.93e-43,41;UBERON:0001890,4.93e-43,41;UBERON:0003080,4.93e-43,41;UBERON:0006240,4.93e-43,41;UBERON:0001893,1.32e-36,34;UBERON:0000955,1.81e-36,68;UBERON:0006238,1.81e-36,68;UBERON:0003528,3.82e-36,34;UBERON:0002020,3.82e-36,34;UBERON:0003075,8.30e-36,82;UBERON:0007284,8.30e-36,82;UBERON:0001869,4.59e-35,32;UBERON:0002791,9.24e-35,32;UBERON:0002346,1.19e-34,86;UBERON:0003056,1.02e-28,61;UBERON:0010371,1.88e-28,104;UBERON:0002619,3.33e-27,22;UBERON:0000956,5.99e-27,25;UBERON:0000203,5.99e-27,25;UBERON:0004121,1.01e-25,171;UBERON:0000924,1.01e-25,171;UBERON:0006601,1.01e-25,171;UBERON:0001950,1.04e-24,20;UBERON:0011216,1.10e-24,223;UBERON:0010314,3.56e-21,132;UBERON:0002420,1.31e-11,9;UBERON:0007245,1.31e-11,9;UBERON:0010009,1.31e-11,9;UBERON:0010011,1.31e-11,9;UBERON:0000454,1.31e-11,9;UBERON:0000125,1.54e-10,9;UBERON:0002308,1.54e-10,9;UBERON:0009663,3.02e-09,7;UBERON:0001871,4.33e-09,6;UBERON:0000922,2.57e-08,592;UBERON:0000200,3.85e-08,6;UBERON:0004111,4.58e-08,240;UBERON:0003076,5.28e-08,15;UBERON:0003057,5.28e-08,15;UBERON:0000025,5.54e-08,192;UBERON:0001894,9.73e-08,7;UBERON:0006222,9.73e-08,7;UBERON:0000349,1.46e-07,5;UBERON:0002021,2.33e-07,5;UBERON:0001872,3.18e-07,5;UBERON:0003135,3.28e-07,11 | |||
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| |||
|short_description=p@chr7:29954723..29954724,+ | |||
}} |
Latest revision as of 09:17, 31 July 2015
Short description: | p@chr7:29954723..29954724, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:29954723..29954724, + |
Coexpression cluster: | C2892_caudate_hippocampus_putamen_amygdala_testis_granulosa_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.71e-09 | 8 |
neuron | 2.37e-07 | 6 |
neuroblast | 2.37e-07 | 6 |
electrically signaling cell | 2.37e-07 | 6 |