FFCP PHASE1:Hg19::chr8:145025063..145025073,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5339 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9069 | |||
|TSSclassifier=strong | |||
|UniProt=Q15149 | |||
|association_with_transcript=-19bp_to_ENST00000322810,NM_201380,uc003zaf.1_5end | |||
|cluster_id=chr8:145025063..145025073,- | |||
|coexpression_cluster_id=C4734 | |||
|description=CAGE_peak_16_at_PLEC_5end | |||
|id=chr8:145025063..145025073,- | |||
|ontology_enrichment_celltype=CL:0000055!1.17e-29!180;CL:0000057!2.46e-26!75;CL:0002371!5.98e-25!591;CL:0000144!1.84e-24!625;CL:0000548!1.79e-23!679;CL:0000004!1.79e-23!679;CL:0000255!1.79e-23!679;CL:0000012!1.34e-22!682;CL:0000723!2.58e-15!436;CL:0000048!5.09e-15!430;CL:0000003!1.76e-13!722;CL:0000034!2.06e-13!444;CL:0000222!1.71e-11!119;CL:0002620!7.41e-11!23;CL:0002320!7.67e-10!365;CL:0000063!1.96e-09!578;CL:0000680!2.83e-09!57;CL:0000056!2.83e-09!57;CL:0000355!2.83e-09!57;CL:0002057!2.94e-09!42;CL:0000860!3.93e-09!45;CL:0000183!7.31e-09!59;CL:0000134!7.31e-09!358;CL:0000187!2.87e-08!54;CL:0002009!3.67e-08!65;CL:0002194!6.64e-08!63;CL:0000576!6.64e-08!63;CL:0000040!6.64e-08!63;CL:0000559!6.64e-08!63;CL:0000219!9.61e-08!390;CL:0000557!1.71e-07!71;CL:0000192!2.78e-07!42;CL:0000514!2.78e-07!42;CL:0000839!7.04e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.42e-14;23!CL:0000057;1.33e-13;73!CL:0000860;1.66e-11;33!CL:0002057;1.66e-11;33!CL:0000473;6.77e-10;39!CL:0000234;6.77e-10;39!CL:0002334;1.04e-08;12!CL:0002320;8.46e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.05e-33,76;CL:0000723,4.07e-24,433;CL:0000048,5.25e-24,427;CL:0000034,1.16e-22,441;CL:0002320,2.84e-17,361;CL:0000134,2.05e-16,354;CL:0002620,1.45e-14,23;CL:0000219,2.43e-13,386;CL:0002334,5.16e-09,12;CL:0000473,9.59e-09,48;CL:0000234,9.59e-09,48;CL:0000860,1.96e-08,42;CL:0002057,1.96e-08,42;CL:0000222,2.54e-08,121;CL:0000680,2.73e-08,58;CL:0000056,2.73e-08,58;CL:0000355,2.73e-08,58;CL:0000192,1.51e-07,43;CL:0000514,1.51e-07,43;CL:0000187,4.48e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;6.23e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.02e-19!167;UBERON:0000926!7.18e-15!448;UBERON:0004120!7.18e-15!448;UBERON:0006603!7.18e-15!448;UBERON:0003081!2.51e-13!216;UBERON:0004765!1.07e-11!101;UBERON:0001434!1.07e-11!101;UBERON:0000468!1.76e-11!659;UBERON:0000914!5.85e-11!83;UBERON:0002329!5.85e-11!83;UBERON:0003077!5.85e-11!83;UBERON:0003059!5.85e-11!83;UBERON:0007282!5.85e-11!83;UBERON:0009618!5.85e-11!83;UBERON:0007285!5.85e-11!83;UBERON:0003102!2.44e-10!95;UBERON:0002384!2.57e-10!375;UBERON:0000480!3.15e-10!626;UBERON:0000467!3.63e-10!625;UBERON:0001474!5.02e-10!86;UBERON:0004290!1.30e-09!70;UBERON:0000486!3.32e-09!82;UBERON:0002199!6.77e-09!45;UBERON:0002416!6.77e-09!45;UBERON:0002371!7.57e-09!80;UBERON:0002050!2.19e-08!605;UBERON:0005423!2.19e-08!605;UBERON:0000923!2.47e-08!604;UBERON:0005291!2.47e-08!604;UBERON:0006598!2.47e-08!604;UBERON:0002532!2.47e-08!604;UBERON:0002097!5.98e-08!40;UBERON:0001637!7.42e-08!42;UBERON:0003509!7.42e-08!42;UBERON:0004572!7.42e-08!42;UBERON:0001134!9.26e-08!61;UBERON:0002036!9.26e-08!61;UBERON:0003082!9.26e-08!61;UBERON:0002049!1.98e-07!79;UBERON:0007798!1.98e-07!79;UBERON:0001981!2.22e-07!60;UBERON:0007500!2.22e-07!60;UBERON:0004537!2.22e-07!60;UBERON:0006965!2.22e-07!60;UBERON:0000922!2.23e-07!612;UBERON:0002385!2.89e-07!63;UBERON:0001015!2.89e-07!63;UBERON:0000383!2.89e-07!63;UBERON:0004872!5.28e-07!84;UBERON:0000055!7.00e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;7.65e-09;46!UBERON:0002416;7.65e-09;46!UBERON:0003102;1.28e-08;50!UBERON:0002097;1.44e-08;41!UBERON:0002384;9.50e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.73e-17,167;UBERON:0002384,1.24e-16,371;UBERON:0000926,6.68e-14,315;UBERON:0004120,6.68e-14,315;UBERON:0006603,6.68e-14,315;UBERON:0002199,1.97e-13,46;UBERON:0002416,1.97e-13,46;UBERON:0002097,9.97e-12,41;UBERON:0007503,4.47e-11,78;UBERON:0001434,2.16e-10,100;UBERON:0003102,2.19e-10,99;UBERON:0002329,5.75e-10,71;UBERON:0003059,5.75e-10,71;UBERON:0007282,5.75e-10,71;UBERON:0004290,5.75e-10,71;UBERON:0009618,5.75e-10,71;UBERON:0003077,1.17e-09,72;UBERON:0007285,1.17e-09,72;UBERON:0007524,2.33e-09,73;UBERON:0003081,2.35e-09,203;UBERON:0000486,8.90e-09,83;UBERON:0001474,1.81e-08,82;UBERON:0004765,3.01e-08,90;UBERON:0002371,1.43e-07,76;UBERON:0001134,3.84e-07,62;UBERON:0002036,3.84e-07,62;UBERON:0003082,3.84e-07,62;UBERON:0001637,5.85e-07,42;UBERON:0003509,5.85e-07,42;UBERON:0004572,5.85e-07,42 | |||
|phase1_expression=1.81678379270557,1.49870366723688,2.53717927372748,1.0007329835313,0.893922188854576,0,2.53299878168311,1.89515962028049,0,2.45733936501509,1.39560233594486,0.655324116390517,1.05506791291381,0.37129905888014,1.98838425436749,0,0,0,0,2.09305798730539,2.65200898617529,1.56727360739044,0,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0,0.928896739896456,0,0.90361775633475,1.47901604066715,0,0,0,0,1.20326668482085,0.868043482863407,0,0.647787332037959,0,3.34415949192999,3.40088349319928,3.63876091781724,2.09186133215116,3.28934310417461,3.71647645074124,2.8769239232215,1.7931249457037,1.89185783910868,0.344745680736619,3.22742341791913,1.35426486594342,3.57660445130949,2.72906150057846,2.02251136000576,3.06083892370903,2.24650318953266,3.19668562899521,1.31940520074686,1.59570926097305,1.70489900213078,1.16083695451434,1.13477044938228,0.622822248995575,2.00998932205395,1.5644487552606,1.08594422352558,0,0.736555271975129,1.26584954976354,0.633765858935825,0.637812899895131,0.628975936525128,0.44931452458598,0.150176892841506,0.16072558669708,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.383587685530591,5.78302643815306,4.51204119572301,1.44846518960824,0,3.89307896242109,0,0.443458794925128,0.527008714158756,0.0654895377488563,4.00724817121796,0,0.649094787309367,1.21890816109487,1.06366368415092,0,0,0,1.98762407366705,0,1.73570250803797,0.56530794192401,0.838998872419812,1.37559020970034,1.04497483268405,0.258416759169329,0,0,0,1.52054421143703,0.24406205754817,0.735326160691737,0.81014194788176,0.446498641420399,0,1.35133776579987,1.53316637465883,2.84779697870439,0.366403487860815,0,0,0.872188104285069,0.993943903390637,1.13967460498122,2.38336525463794,15.2023408996871,2.4826786753885,1.12135520028461,2.1349799145941,1.97334038733728,2.48968828319813,0.538842688278752,1.14423332179421,0.454072282934794,1.15235184896,1.64025002283658,3.43376084513353,2.2818872861778,3.28787097213962,2.23125547423153,1.94247533241758,2.66856532734272,2.44985005505872,2.21101771161182,3.30642499762449,3.56400857184616,2.22540236350701,6.37112953356618,3.59309070908119,2.02003336744879,1.7516592782075,1.93944880838928,2.63386572528503,0.919463387397059,1.65261864797256,0.680593098960126,9.68704032719855,1.06778694409284,1.27159140695737,10.2030972668697,1.33968288009971,10.5632621418708,2.23340227597908,7.93248761533951,1.85130309806277,10.3497847440087,0.828449087780694,1.2931684545505,6.39017266529906,1.81353776809752,2.54340888465731,0.193260853163297,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,2.57296375277154,0,1.39310378409594,3.60939740834793,0,0.168584690078102,0.241011029883482,0.330881918197182,0,0.474541238222193,0,0,0,0.738155454624648,4.20725321410337,0.8231480226628,0,0,0,0,0,0,0.171567810298526,1.20725313949488,2.24803506515239,0.804231779293047,0.555530670951178,2.28065813717227,3.11980435583874,0,0.115930404975077,0.234817388471643,0.288732895522148,0,0.380508304469197,0,0,1.96973604869918,2.10603838625314,1.93220510975347,0.93733833986777,0.16798212819886,0,0.179117045405697,0.871901815541886,0,0,0,1.86595303986695,1.00883967391873,0.6312121671319,0.444485260045183,0.381988425558278,0,0,0.308482478109971,0,0,1.23344192779897,0.43596006883328,0.22001485746285,0.775630294546667,10.7296933755565,0,0.26593811658487,1.04007436911366,3.60090323966999,1.41849132023278,3.46348832720929,0.142977993658148,1.08524321078289,1.64648067356154,1.62868092146868,0.355391948742546,1.58390374586686,0,0,0.199945982364114,0,0.502257091432126,0,3.35474797688216,0,2.85273810081437,1.88215698667853,1.64381058040307,1.96967059563885,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.49076596687656,1.50051156317903,1.35632511849868,1.45579603071565,0.892144943985809,0.946214490203608,1.63997980989798,1.50473049863859,0,1.03473071292505,1.32845119707087,1.65932251687533,1.73767228936166,1.56640925970192,0.686286847621712,0.206768026122887,0.431428401637234,0.320182673410333,0.303127571446259,0,0.30239029332968,1.24053903909388,5.21770709179412,1.68396056659844,2.17836553734692,1.02341449813341,1.60853921143608,2.96836132889982,1.85051632563187,1.77561725313127,2.21743321237285,4.15403543346897,2.67283870457906,0,0.200506470303285,0.0920809889358963,1.14814448164607,2.1850940160806,0.655622074797121,0.902399225814824,0.231046011313244,1.56869953835371,1.46139224653261,0.105551628892876,1.13733384070897,1.70093705276516,1.0795795805107,0,2.43851793789468,0,1.01950509218015,0.831076008928724,0.671624264166535,0,0,0.512900250232778,0,0.976135183992909,0,1.73981983154852,1.32015199872941,0,0.650060246036521,3.21367859688319,1.45006077438183,1.3864375540318,0.307007349452259,1.37836572484531,0.751941714077915,0.580066775656914,1.10794615640931,0.623224249527161,0.826424576804891,0.576570202095319,1.65896526242959,0.50578890427775,0.464845549297286,12.277681526395,2.78814908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| |||
|short_description=p16@PLEC | |||
}} |
Latest revision as of 23:56, 16 September 2015
Short description: | p16@PLEC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PLEC_5end |
Coexpression cluster: | C4734_Fibroblast_Smooth_Mesenchymal_Preadipocyte_Keratocytes_Chondrocyte_melanoma |
Association with transcript: | -19bp_to_ENST00000322810, NM_201380, uc003zaf.1_5end |
EntrezGene: | PLEC |
HGNC: | 9069 |
UniProt: | Q15149 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.05e-33 | 76 |
somatic stem cell | 4.07e-24 | 433 |
multi fate stem cell | 5.25e-24 | 427 |
stem cell | 1.16e-22 | 441 |
connective tissue cell | 2.84e-17 | 361 |
mesenchymal cell | 2.05e-16 | 354 |
skin fibroblast | 1.45e-14 | 23 |
motile cell | 2.43e-13 | 386 |
preadipocyte | 5.16e-09 | 12 |
defensive cell | 9.59e-09 | 48 |
phagocyte | 9.59e-09 | 48 |
classical monocyte | 1.96e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-08 | 42 |
mesodermal cell | 2.54e-08 | 121 |
muscle precursor cell | 2.73e-08 | 58 |
myoblast | 2.73e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.73e-08 | 58 |
smooth muscle cell | 1.51e-07 | 43 |
smooth muscle myoblast | 1.51e-07 | 43 |
muscle cell | 4.48e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.73e-17 | 167 |
connective tissue | 1.24e-16 | 371 |
mesoderm | 6.68e-14 | 315 |
mesoderm-derived structure | 6.68e-14 | 315 |
presumptive mesoderm | 6.68e-14 | 315 |
integument | 1.97e-13 | 46 |
integumental system | 1.97e-13 | 46 |
skin of body | 9.97e-12 | 41 |
epithelial vesicle | 4.47e-11 | 78 |
skeletal system | 2.16e-10 | 100 |
surface structure | 2.19e-10 | 99 |
somite | 5.75e-10 | 71 |
presomitic mesoderm | 5.75e-10 | 71 |
presumptive segmental plate | 5.75e-10 | 71 |
dermomyotome | 5.75e-10 | 71 |
trunk paraxial mesoderm | 5.75e-10 | 71 |
paraxial mesoderm | 1.17e-09 | 72 |
presumptive paraxial mesoderm | 1.17e-09 | 72 |
dense mesenchyme tissue | 2.33e-09 | 73 |
lateral plate mesoderm | 2.35e-09 | 203 |
multilaminar epithelium | 8.90e-09 | 83 |
bone element | 1.81e-08 | 82 |
skeletal element | 3.01e-08 | 90 |
bone marrow | 1.43e-07 | 76 |
skeletal muscle tissue | 3.84e-07 | 62 |
striated muscle tissue | 3.84e-07 | 62 |
myotome | 3.84e-07 | 62 |
artery | 5.85e-07 | 42 |
arterial blood vessel | 5.85e-07 | 42 |
arterial system | 5.85e-07 | 42 |