FFCP PHASE1:Mm9::chr4:154393508..154393546,-: Difference between revisions
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{{FFCP|EntrezGene=269615|HGNC=|MCL_coexpression_id=30|UniProt=A6PWW4,A2AP19|association_with_transcript=0bp_to_ENSMUST00000126098,ENSMUST00000131173_5end|description=CAGE_peak_1_at_Plch2_5end|id=chr4:154393508..154393546,-|ontology_enrichment_celltype=CL:0000540!2.69e-10!33;CL:0000047!2.69e-10!33;CL:0000031!2.69e-10!33;CL:0000404!2.69e-10!33;CL:0000117!2.13e-08!23;CL:0000337!2.13e-08!23;CL:0000221!7.10e-08!44;CL:0000133!7.10e-08!44;CL:0002319!2.07e-07!43;CL:0000393!3.98e-07!39;CL:0000211!3.98e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,4.53e-11,33;CL:0000047,4.53e-11,33;CL:0000031,4.53e-11,33;CL:0000404,4.53e-11,33;CL:0000117,3.68e-09,23;CL:0000337,3.68e-09,23;CL:0000221,2.01e-08,44;CL:0000133,2.01e-08,44;CL:0000393,5.95e-08,39;CL:0000211,5.95e-08,39;CL:0002319,6.78e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.53e-25!63;UBERON:0001017!1.36e-24!73;UBERON:0005743!1.36e-24!73;UBERON:0000073!1.18e-22!75;UBERON:0001016!1.18e-22!75;UBERON:0000955!3.99e-22!50;UBERON:0006238!3.99e-22!50;UBERON:0002616!1.94e-21!49;UBERON:0004121!2.14e-20!102;UBERON:0000924!2.14e-20!102;UBERON:0006601!2.14e-20!102;UBERON:0001049!3.73e-20!52;UBERON:0005068!3.73e-20!52;UBERON:0006241!3.73e-20!52;UBERON:0007135!3.73e-20!52;UBERON:0002346!1.07e-19!71;UBERON:0003075!1.07e-19!71;UBERON:0007284!1.07e-19!71;UBERON:0003056!1.14e-18!49;UBERON:0003080!6.13e-17!40;UBERON:0002780!2.45e-16!39;UBERON:0001890!2.45e-16!39;UBERON:0006240!2.45e-16!39;UBERON:0007811!7.53e-14!86;UBERON:0000153!2.25e-13!94;UBERON:0002020!9.12e-13!34;UBERON:0002791!1.71e-12!29;UBERON:0003528!1.71e-12!29;UBERON:0001893!1.71e-12!29;UBERON:0000956!7.50e-10!21;UBERON:0001869!7.50e-10!21;UBERON:0000203!7.50e-10!21;UBERON:0004111!3.68e-08!122;UBERON:0002619!1.05e-07!17;UBERON:0000025!2.55e-07!114;UBERON:0002021!4.47e-07!10;UBERON:0000411!4.47e-07!10;UBERON:0001950!4.47e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.40e-27,73;UBERON:0002346,1.36e-25,64;UBERON:0003075,1.36e-25,64;UBERON:0007284,1.36e-25,64;UBERON:0001016,1.95e-25,75;UBERON:0004121,9.71e-25,95;UBERON:0000924,9.71e-25,95;UBERON:0006601,9.71e-25,95;UBERON:0000073,3.61e-24,54;UBERON:0010371,7.28e-24,73;UBERON:0000955,1.83e-22,47;UBERON:0006238,1.83e-22,47;UBERON:0001049,2.91e-22,52;UBERON:0005068,2.91e-22,52;UBERON:0006241,2.91e-22,52;UBERON:0007135,2.91e-22,52;UBERON:0002616,1.09e-21,46;UBERON:0003056,2.59e-20,49;UBERON:0003080,6.37e-19,40;UBERON:0002780,3.17e-18,39;UBERON:0001890,3.17e-18,39;UBERON:0006240,3.17e-18,39;UBERON:0010314,8.78e-14,92;UBERON:0003528,9.53e-14,29;UBERON:0002791,9.53e-14,29;UBERON:0001893,9.53e-14,29;UBERON:0002020,1.05e-13,34;UBERON:0011216,7.53e-11,194;UBERON:0000956,1.17e-10,21;UBERON:0001869,1.17e-10,21;UBERON:0000203,1.17e-10,21;UBERON:0002619,3.49e-08,17;UBERON:0004111,4.38e-08,122;UBERON:0002021,5.33e-08,10;UBERON:0000411,5.33e-08,10;UBERON:0001950,5.33e-08,10;UBERON:0000025,2.60e-07,114|phase1_expression=51.7280776148485,0.348975407639361,0.454999239389536,17.845388467103,15.0268718983904,0,0.233612640595526,0,0.281577444303333,0.234064526321993,0.856089841127525,0.0797721589953364,0.342401459862411,0.34968160967599,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,1.27316895539409,11.3107575900923,0.198581902401771,0.522399578277871,0.799962113967033,0,0,0.86152399231815,0.215471232685889,0.190023419456374,0,0,2.54012269383853,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.917733760808408,1.56478268869608,1.09012578190223,0.659058548203415,0.58328969722285,0.55994568650145,1.43752564364972,0.335565212115473,2.90144856804538,0.336093799142464,0.257259436035947,0,1.03134418455488,1.21389876515759,1.5869729378161,2.53532561402472,1.0165335962074,0,0.449949858640699,0.988866362566974,2.1314403448383,0.299600110518405,1.53687322128622,10.3689612308478,10.9354810048669,11.567872874326,1.71390590642282,2.20868540951614,2.81728838194394,3.35459148563827,3.67687514644008,42.9451935897616,40.7322608491749,34.715076515911,2.90149833006426,4.20843160571084,6.77187381723788,15.6342479440773,1.68828783009504,10.3902808488231,2.35702868378934,1.56608848879013,0.745597783301202,0.151452386666368,0.0755715601067855,0.869593466105033,2.58127163094416,1.3599426674155,0,1.29955283489534,0.448026887097336,1.96622188184453,0.170430322578058,1.29893002301434,1.06001872353102,22.1124169049388,1.28326477414318,0,7.11066703153331,0.216491041011214,0,1.01104889002957,1.25602267690966,1.29468941823586,0.445326417194474,0.346970653532272,0.913396434936424,1.15307748628029,0,0.352766121407114,0.628332956648377,0.247194967734374,0.433798070759735,1.76922110389975,0.161766849947409,0.441683036920787,2.42437626567611,5.59175283654366,181.816874944171,166.09123850307,1.27728527604296,0,0,0,17.3757141709594,11.4375150704657,1.13088916901578,28.3333641913411,28.3844157636667,22.648896856992,23.3627418817571,0.101839363850316,0.746441823660558,1.0108910337347,13.4682787767343,0.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269615 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=A6PWW4,A2AP19 | |||
|association_with_transcript=0bp_to_ENSMUST00000126098,ENSMUST00000131173_5end | |||
|cluster_id=chr4:154393508..154393546,- | |||
|description=CAGE_peak_1_at_Plch2_5end | |||
|id=chr4:154393508..154393546,- | |||
|ontology_enrichment_celltype=CL:0000540!2.69e-10!33;CL:0000047!2.69e-10!33;CL:0000031!2.69e-10!33;CL:0000404!2.69e-10!33;CL:0000117!2.13e-08!23;CL:0000337!2.13e-08!23;CL:0000221!7.10e-08!44;CL:0000133!7.10e-08!44;CL:0002319!2.07e-07!43;CL:0000393!3.98e-07!39;CL:0000211!3.98e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.53e-11,33;CL:0000047,4.53e-11,33;CL:0000031,4.53e-11,33;CL:0000404,4.53e-11,33;CL:0000117,3.68e-09,23;CL:0000337,3.68e-09,23;CL:0000221,2.01e-08,44;CL:0000133,2.01e-08,44;CL:0000393,5.95e-08,39;CL:0000211,5.95e-08,39;CL:0002319,6.78e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.53e-25!63;UBERON:0001017!1.36e-24!73;UBERON:0005743!1.36e-24!73;UBERON:0000073!1.18e-22!75;UBERON:0001016!1.18e-22!75;UBERON:0000955!3.99e-22!50;UBERON:0006238!3.99e-22!50;UBERON:0002616!1.94e-21!49;UBERON:0004121!2.14e-20!102;UBERON:0000924!2.14e-20!102;UBERON:0006601!2.14e-20!102;UBERON:0001049!3.73e-20!52;UBERON:0005068!3.73e-20!52;UBERON:0006241!3.73e-20!52;UBERON:0007135!3.73e-20!52;UBERON:0002346!1.07e-19!71;UBERON:0003075!1.07e-19!71;UBERON:0007284!1.07e-19!71;UBERON:0003056!1.14e-18!49;UBERON:0003080!6.13e-17!40;UBERON:0002780!2.45e-16!39;UBERON:0001890!2.45e-16!39;UBERON:0006240!2.45e-16!39;UBERON:0007811!7.53e-14!86;UBERON:0000153!2.25e-13!94;UBERON:0002020!9.12e-13!34;UBERON:0002791!1.71e-12!29;UBERON:0003528!1.71e-12!29;UBERON:0001893!1.71e-12!29;UBERON:0000956!7.50e-10!21;UBERON:0001869!7.50e-10!21;UBERON:0000203!7.50e-10!21;UBERON:0004111!3.68e-08!122;UBERON:0002619!1.05e-07!17;UBERON:0000025!2.55e-07!114;UBERON:0002021!4.47e-07!10;UBERON:0000411!4.47e-07!10;UBERON:0001950!4.47e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.40e-27,73;UBERON:0002346,1.36e-25,64;UBERON:0003075,1.36e-25,64;UBERON:0007284,1.36e-25,64;UBERON:0001016,1.95e-25,75;UBERON:0004121,9.71e-25,95;UBERON:0000924,9.71e-25,95;UBERON:0006601,9.71e-25,95;UBERON:0000073,3.61e-24,54;UBERON:0010371,7.28e-24,73;UBERON:0000955,1.83e-22,47;UBERON:0006238,1.83e-22,47;UBERON:0001049,2.91e-22,52;UBERON:0005068,2.91e-22,52;UBERON:0006241,2.91e-22,52;UBERON:0007135,2.91e-22,52;UBERON:0002616,1.09e-21,46;UBERON:0003056,2.59e-20,49;UBERON:0003080,6.37e-19,40;UBERON:0002780,3.17e-18,39;UBERON:0001890,3.17e-18,39;UBERON:0006240,3.17e-18,39;UBERON:0010314,8.78e-14,92;UBERON:0003528,9.53e-14,29;UBERON:0002791,9.53e-14,29;UBERON:0001893,9.53e-14,29;UBERON:0002020,1.05e-13,34;UBERON:0011216,7.53e-11,194;UBERON:0000956,1.17e-10,21;UBERON:0001869,1.17e-10,21;UBERON:0000203,1.17e-10,21;UBERON:0002619,3.49e-08,17;UBERON:0004111,4.38e-08,122;UBERON:0002021,5.33e-08,10;UBERON:0000411,5.33e-08,10;UBERON:0001950,5.33e-08,10;UBERON:0000025,2.60e-07,114 | |||
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| |||
|short_description=p1@Plch2 | |||
}} |
Latest revision as of 19:41, 26 September 2015
Short description: | p1@Plch2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plch2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000126098, ENSMUST00000131173_5end |
EntrezGene: | Plch2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.53e-11 | 33 |
neuronal stem cell | 4.53e-11 | 33 |
neuroblast | 4.53e-11 | 33 |
electrically signaling cell | 4.53e-11 | 33 |
CNS neuron (sensu Vertebrata) | 3.68e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.68e-09 | 23 |
ectodermal cell | 2.01e-08 | 44 |
neurectodermal cell | 2.01e-08 | 44 |
electrically responsive cell | 5.95e-08 | 39 |
electrically active cell | 5.95e-08 | 39 |
neural cell | 6.78e-08 | 43 |