FFCP PHASE1:Mm9::chr5:34338743..34338760,+: Difference between revisions
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{{FFCP|EntrezGene=269642|HGNC=|MCL_coexpression_id=2703|UniProt=Q3UGX3|association_with_transcript=110bp_to_ENSMUST00000056355,NM_001001985,uc008xbs.1_5end|description=CAGE_peak_3_at_Nat8l_5end|id=chr5:34338743..34338760,+|ontology_enrichment_celltype=CL:0000117!1.17e-08!23;CL:0000337!1.17e-08!23|ontology_enrichment_celltype_v019_2=CL:0002610,5.33e-12,3;CL:0002611,1.00e-07,2;CL:0000117,6.43e-07,23;CL:0000337,6.43e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.88e-23!52;UBERON:0005068!9.88e-23!52;UBERON:0006241!9.88e-23!52;UBERON:0007135!9.88e-23!52;UBERON:0000073!3.02e-22!75;UBERON:0001016!3.02e-22!75;UBERON:0000955!2.84e-21!50;UBERON:0006238!2.84e-21!50;UBERON:0001017!6.83e-21!73;UBERON:0005743!6.83e-21!73;UBERON:0002616!3.43e-20!49;UBERON:0000033!3.63e-19!63;UBERON:0004121!1.85e-17!102;UBERON:0000924!1.85e-17!102;UBERON:0006601!1.85e-17!102;UBERON:0002020!2.10e-17!34;UBERON:0002346!1.08e-15!71;UBERON:0003075!1.08e-15!71;UBERON:0007284!1.08e-15!71;UBERON:0002021!2.53e-13!10;UBERON:0000411!2.53e-13!10;UBERON:0001950!2.53e-13!10;UBERON:0003080!9.75e-13!40;UBERON:0002791!9.95e-13!29;UBERON:0003528!9.95e-13!29;UBERON:0001893!9.95e-13!29;UBERON:0003076!4.87e-12!12;UBERON:0003057!4.87e-12!12;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0007811!3.65e-11!86;UBERON:0003056!6.65e-11!49;UBERON:0000153!3.83e-10!94;UBERON:0002619!1.49e-09!17;UBERON:0002298!3.30e-09!6;UBERON:0000956!1.26e-08!21;UBERON:0001869!1.26e-08!21;UBERON:0000203!1.26e-08!21;UBERON:0002240!5.75e-08!6;UBERON:0005174!5.75e-08!6;UBERON:0001137!5.75e-08!6;UBERON:0004111!3.56e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.22e-23,54;UBERON:0001017,3.36e-20,73;UBERON:0001016,1.47e-19,75;UBERON:0001049,4.68e-19,52;UBERON:0005068,4.68e-19,52;UBERON:0006241,4.68e-19,52;UBERON:0007135,4.68e-19,52;UBERON:0000955,1.77e-16,47;UBERON:0006238,1.77e-16,47;UBERON:0002021,2.25e-16,10;UBERON:0000411,2.25e-16,10;UBERON:0001950,2.25e-16,10;UBERON:0002020,5.69e-15,34;UBERON:0002346,7.53e-15,64;UBERON:0003075,7.53e-15,64;UBERON:0007284,7.53e-15,64;UBERON:0002616,9.93e-15,46;UBERON:0004121,1.27e-14,95;UBERON:0000924,1.27e-14,95;UBERON:0006601,1.27e-14,95;UBERON:0003528,9.77e-13,29;UBERON:0002791,9.77e-13,29;UBERON:0001893,9.77e-13,29;UBERON:0003080,1.32e-12,40;UBERON:0010371,1.34e-12,73;UBERON:0000956,4.60e-12,21;UBERON:0001869,4.60e-12,21;UBERON:0000203,4.60e-12,21;UBERON:0004684,5.33e-12,3;UBERON:0002275,5.33e-12,3;UBERON:0002619,5.91e-12,17;UBERON:0002780,7.40e-11,39;UBERON:0001890,7.40e-11,39;UBERON:0006240,7.40e-11,39;UBERON:0003056,7.50e-10,49;UBERON:0010314,2.72e-09,92;UBERON:0002950,6.39e-09,4;UBERON:0001891,6.39e-09,4;UBERON:0009616,6.39e-09,4;UBERON:0010286,6.39e-09,4;UBERON:0001896,1.27e-08,2;UBERON:0002298,1.27e-08,2;UBERON:0005290,1.27e-08,2;UBERON:0010096,1.27e-08,2;UBERON:0002256,1.00e-07,2;UBERON:0003076,1.60e-07,12;UBERON:0003057,1.60e-07,12;UBERON:0000025,7.75e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.10434270475807,0,0,0,5.50579404996943,1.53224805702225,1.99688493233117,0.263772575460388,0.274462930807229,0,2.79182999001381,0.56276261003168,1.22238598221448,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,2.39665023047716,0,0.251308704225729,1.56441888173049,2.04572365864264,1.66230435647648,0.811206315338788,0,0,0.252722758433675,0,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,1.05144974282064,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.75817529888305,0,0,0,0,0,0,0,0,0,0.292255857911312,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0.32977250588296,0,0,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,1.10992976687032,4.66512054369274,0.671538465456314,0,0,0,0.428736758158132,0,1.12950368523413,1.38097570952153,1.14579102687879,0.68741272937475,2.05524755931193,1.5107877947794,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.271608227691724,0,0,0,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p3@Nat8l}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269642 | |||
|HGNC= | |||
|MCL_coexpression_id=2703 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UGX3 | |||
|association_with_transcript=110bp_to_ENSMUST00000056355,NM_001001985,uc008xbs.1_5end | |||
|cluster_id=chr5:34338743..34338760,+ | |||
|description=CAGE_peak_3_at_Nat8l_5end | |||
|id=chr5:34338743..34338760,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.17e-08!23;CL:0000337!1.17e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.33e-12,3;CL:0002611,1.00e-07,2;CL:0000117,6.43e-07,23;CL:0000337,6.43e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.88e-23!52;UBERON:0005068!9.88e-23!52;UBERON:0006241!9.88e-23!52;UBERON:0007135!9.88e-23!52;UBERON:0000073!3.02e-22!75;UBERON:0001016!3.02e-22!75;UBERON:0000955!2.84e-21!50;UBERON:0006238!2.84e-21!50;UBERON:0001017!6.83e-21!73;UBERON:0005743!6.83e-21!73;UBERON:0002616!3.43e-20!49;UBERON:0000033!3.63e-19!63;UBERON:0004121!1.85e-17!102;UBERON:0000924!1.85e-17!102;UBERON:0006601!1.85e-17!102;UBERON:0002020!2.10e-17!34;UBERON:0002346!1.08e-15!71;UBERON:0003075!1.08e-15!71;UBERON:0007284!1.08e-15!71;UBERON:0002021!2.53e-13!10;UBERON:0000411!2.53e-13!10;UBERON:0001950!2.53e-13!10;UBERON:0003080!9.75e-13!40;UBERON:0002791!9.95e-13!29;UBERON:0003528!9.95e-13!29;UBERON:0001893!9.95e-13!29;UBERON:0003076!4.87e-12!12;UBERON:0003057!4.87e-12!12;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0007811!3.65e-11!86;UBERON:0003056!6.65e-11!49;UBERON:0000153!3.83e-10!94;UBERON:0002619!1.49e-09!17;UBERON:0002298!3.30e-09!6;UBERON:0000956!1.26e-08!21;UBERON:0001869!1.26e-08!21;UBERON:0000203!1.26e-08!21;UBERON:0002240!5.75e-08!6;UBERON:0005174!5.75e-08!6;UBERON:0001137!5.75e-08!6;UBERON:0004111!3.56e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.22e-23,54;UBERON:0001017,3.36e-20,73;UBERON:0001016,1.47e-19,75;UBERON:0001049,4.68e-19,52;UBERON:0005068,4.68e-19,52;UBERON:0006241,4.68e-19,52;UBERON:0007135,4.68e-19,52;UBERON:0000955,1.77e-16,47;UBERON:0006238,1.77e-16,47;UBERON:0002021,2.25e-16,10;UBERON:0000411,2.25e-16,10;UBERON:0001950,2.25e-16,10;UBERON:0002020,5.69e-15,34;UBERON:0002346,7.53e-15,64;UBERON:0003075,7.53e-15,64;UBERON:0007284,7.53e-15,64;UBERON:0002616,9.93e-15,46;UBERON:0004121,1.27e-14,95;UBERON:0000924,1.27e-14,95;UBERON:0006601,1.27e-14,95;UBERON:0003528,9.77e-13,29;UBERON:0002791,9.77e-13,29;UBERON:0001893,9.77e-13,29;UBERON:0003080,1.32e-12,40;UBERON:0010371,1.34e-12,73;UBERON:0000956,4.60e-12,21;UBERON:0001869,4.60e-12,21;UBERON:0000203,4.60e-12,21;UBERON:0004684,5.33e-12,3;UBERON:0002275,5.33e-12,3;UBERON:0002619,5.91e-12,17;UBERON:0002780,7.40e-11,39;UBERON:0001890,7.40e-11,39;UBERON:0006240,7.40e-11,39;UBERON:0003056,7.50e-10,49;UBERON:0010314,2.72e-09,92;UBERON:0002950,6.39e-09,4;UBERON:0001891,6.39e-09,4;UBERON:0009616,6.39e-09,4;UBERON:0010286,6.39e-09,4;UBERON:0001896,1.27e-08,2;UBERON:0002298,1.27e-08,2;UBERON:0005290,1.27e-08,2;UBERON:0010096,1.27e-08,2;UBERON:0002256,1.00e-07,2;UBERON:0003076,1.60e-07,12;UBERON:0003057,1.60e-07,12;UBERON:0000025,7.75e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.10434270475807,0,0,0,5.50579404996943,1.53224805702225,1.99688493233117,0.263772575460388,0.274462930807229,0,2.79182999001381,0.56276261003168,1.22238598221448,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,2.39665023047716,0,0.251308704225729,1.56441888173049,2.04572365864264,1.66230435647648,0.811206315338788,0,0,0.252722758433675,0,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,1.05144974282064,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.75817529888305,0,0,0,0,0,0,0,0,0,0.292255857911312,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0.32977250588296,0,0,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,1.10992976687032,4.66512054369274,0.671538465456314,0,0,0,0.428736758158132,0,1.12950368523413,1.38097570952153,1.14579102687879,0.68741272937475,2.05524755931193,1.5107877947794,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.271608227691724,0,0,0,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p3@Nat8l | |||
}} |
Latest revision as of 23:16, 25 September 2015
Short description: | p3@Nat8l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nat8l_5end |
Coexpression cluster: | MCL_coexpression_mm9:2703 |
Association with transcript: | 110bp_to_ENSMUST00000056355, NM_001001985, uc008xbs.1_5end |
EntrezGene: | Nat8l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.33e-12 | 3 |
neuron of the dorsal spinal cord | 1.00e-07 | 2 |
CNS neuron (sensu Vertebrata) | 6.43e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.43e-07 | 23 |