FFCP PHASE1:Mm9::chr5:34892193..34892201,+: Difference between revisions
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{{FFCP|EntrezGene=24055|HGNC=|MCL_coexpression_id=22|UniProt=E9QJU7,Q5U3L0|association_with_transcript=-23bp_to_ENSMUST00000118545,NM_001145859,uc008xco.2_5end|description=CAGE_peak_7_at_Sh3bp2_5end|id=chr5:34892193..34892201,+|ontology_enrichment_celltype=CL:0000117!2.89e-09!23;CL:0000337!2.89e-09!23;CL:0000393!1.55e-07!39;CL:0000211!1.55e-07!39;CL:0000540!3.25e-07!33;CL:0000047!3.25e-07!33;CL:0000031!3.25e-07!33;CL:0000404!3.25e-07!33;CL:0002609!4.82e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-30,23;CL:0000337,2.30e-30,23;CL:0002608,6.99e-27,3;CL:0002609,9.58e-24,6;CL:0000540,4.47e-21,33;CL:0000047,4.47e-21,33;CL:0000031,4.47e-21,33;CL:0000404,4.47e-21,33;CL:0000393,8.86e-18,39;CL:0000211,8.86e-18,39;CL:0002319,4.34e-16,43;CL:0000221,1.03e-15,44;CL:0000133,1.03e-15,44;CL:0002613,9.50e-13,3;CL:0000120,1.42e-12,3;CL:0002321,1.06e-09,70;CL:0000723,2.51e-07,91;CL:0000048,2.51e-07,91;CL:0000034,7.79e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.36e-16,5;UBERON:0002435,1.36e-16,5;UBERON:0000204,1.36e-16,5;UBERON:0010082,1.36e-16,5;UBERON:0002020,3.22e-16,34;UBERON:0003528,1.17e-14,29;UBERON:0002791,1.17e-14,29;UBERON:0001893,1.17e-14,29;UBERON:0001954,6.24e-12,7;UBERON:0003022,6.24e-12,7;UBERON:0002421,6.24e-12,7;UBERON:0000349,6.24e-12,7;UBERON:0002600,6.24e-12,7;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002780,7.80e-11,39;UBERON:0001890,7.80e-11,39;UBERON:0006240,7.80e-11,39;UBERON:0002420,1.29e-10,8;UBERON:0007245,1.29e-10,8;UBERON:0010009,1.29e-10,8;UBERON:0010011,1.29e-10,8;UBERON:0000454,1.29e-10,8;UBERON:0003080,1.48e-10,40;UBERON:0001049,1.79e-10,52;UBERON:0005068,1.79e-10,52;UBERON:0006241,1.79e-10,52;UBERON:0007135,1.79e-10,52;UBERON:0000073,4.53e-10,54;UBERON:0002616,3.87e-09,46;UBERON:0000955,6.16e-09,47;UBERON:0006238,6.16e-09,47;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0003056,1.47e-08,49;UBERON:0002346,2.01e-08,64;UBERON:0003075,2.01e-08,64;UBERON:0007284,2.01e-08,64;UBERON:0010371,2.53e-07,73;UBERON:0000956,4.92e-07,21;UBERON:0001869,4.92e-07,21;UBERON:0000203,4.92e-07,21|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.82084814773638,1.05798195854407,0,0,0,0,0,0,0,0,1.55534418462716,0.945041568321835,0.841299845405528,0,0.441737081903227,1.22490799214954,1.43768206527355,1.83843757322004,0,0,0,1.31886287730194,1.82975287204819,0.52091337055676,0,0.56276261003168,0.15279824777681,0.294628585473668,0.284743361598206,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,0,0,1.63350657746724,0.173824320192276,0,0,0,0.203678727700633,0,0,0,0.260240885925407,0,0.900310649026746,0.30140963567143,0.340182495756639,0.12811372028485,0.374806898238915,0,0.431135985865684,0,0.703804496655795,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0.92614151141356,0,0,0.639864751605702,0,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.327869890753351,0,0,0,0,0.716906393857656,0.222798674082394,0,0.809621403349789,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0,0.443068581523732,0.100966449948148,0.15241361331,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0,0,0,0,0.666740183404846,0,0,0,0.50695859978048,0.943131706930381,0.280924522409647,0.128050304809739,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.999242311751784,0,0,0,0,0|short_description=p7@Sh3bp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=24055 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=E9QJU7,Q5U3L0 | |||
|association_with_transcript=-23bp_to_ENSMUST00000118545,NM_001145859,uc008xco.2_5end | |||
|cluster_id=chr5:34892193..34892201,+ | |||
|description=CAGE_peak_7_at_Sh3bp2_5end | |||
|id=chr5:34892193..34892201,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.89e-09!23;CL:0000337!2.89e-09!23;CL:0000393!1.55e-07!39;CL:0000211!1.55e-07!39;CL:0000540!3.25e-07!33;CL:0000047!3.25e-07!33;CL:0000031!3.25e-07!33;CL:0000404!3.25e-07!33;CL:0002609!4.82e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-30,23;CL:0000337,2.30e-30,23;CL:0002608,6.99e-27,3;CL:0002609,9.58e-24,6;CL:0000540,4.47e-21,33;CL:0000047,4.47e-21,33;CL:0000031,4.47e-21,33;CL:0000404,4.47e-21,33;CL:0000393,8.86e-18,39;CL:0000211,8.86e-18,39;CL:0002319,4.34e-16,43;CL:0000221,1.03e-15,44;CL:0000133,1.03e-15,44;CL:0002613,9.50e-13,3;CL:0000120,1.42e-12,3;CL:0002321,1.06e-09,70;CL:0000723,2.51e-07,91;CL:0000048,2.51e-07,91;CL:0000034,7.79e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.36e-16,5;UBERON:0002435,1.36e-16,5;UBERON:0000204,1.36e-16,5;UBERON:0010082,1.36e-16,5;UBERON:0002020,3.22e-16,34;UBERON:0003528,1.17e-14,29;UBERON:0002791,1.17e-14,29;UBERON:0001893,1.17e-14,29;UBERON:0001954,6.24e-12,7;UBERON:0003022,6.24e-12,7;UBERON:0002421,6.24e-12,7;UBERON:0000349,6.24e-12,7;UBERON:0002600,6.24e-12,7;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002780,7.80e-11,39;UBERON:0001890,7.80e-11,39;UBERON:0006240,7.80e-11,39;UBERON:0002420,1.29e-10,8;UBERON:0007245,1.29e-10,8;UBERON:0010009,1.29e-10,8;UBERON:0010011,1.29e-10,8;UBERON:0000454,1.29e-10,8;UBERON:0003080,1.48e-10,40;UBERON:0001049,1.79e-10,52;UBERON:0005068,1.79e-10,52;UBERON:0006241,1.79e-10,52;UBERON:0007135,1.79e-10,52;UBERON:0000073,4.53e-10,54;UBERON:0002616,3.87e-09,46;UBERON:0000955,6.16e-09,47;UBERON:0006238,6.16e-09,47;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0003056,1.47e-08,49;UBERON:0002346,2.01e-08,64;UBERON:0003075,2.01e-08,64;UBERON:0007284,2.01e-08,64;UBERON:0010371,2.53e-07,73;UBERON:0000956,4.92e-07,21;UBERON:0001869,4.92e-07,21;UBERON:0000203,4.92e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.82084814773638,1.05798195854407,0,0,0,0,0,0,0,0,1.55534418462716,0.945041568321835,0.841299845405528,0,0.441737081903227,1.22490799214954,1.43768206527355,1.83843757322004,0,0,0,1.31886287730194,1.82975287204819,0.52091337055676,0,0.56276261003168,0.15279824777681,0.294628585473668,0.284743361598206,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,0,0,1.63350657746724,0.173824320192276,0,0,0,0.203678727700633,0,0,0,0.260240885925407,0,0.900310649026746,0.30140963567143,0.340182495756639,0.12811372028485,0.374806898238915,0,0.431135985865684,0,0.703804496655795,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0.92614151141356,0,0,0.639864751605702,0,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.327869890753351,0,0,0,0,0.716906393857656,0.222798674082394,0,0.809621403349789,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0,0.443068581523732,0.100966449948148,0.15241361331,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0,0,0,0,0.666740183404846,0,0,0,0.50695859978048,0.943131706930381,0.280924522409647,0.128050304809739,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.999242311751784,0,0,0,0,0 | |||
|short_description=p7@Sh3bp2 | |||
}} |
Latest revision as of 23:33, 25 September 2015
Short description: | p7@Sh3bp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Sh3bp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -23bp_to_ENSMUST00000118545, NM_001145859, uc008xco.2_5end |
EntrezGene: | Sh3bp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.30e-30 | 23 |
neuroblast (sensu Vertebrata) | 2.30e-30 | 23 |
hippocampal neuron | 6.99e-27 | 3 |
neuron of cerebral cortex | 9.58e-24 | 6 |
neuron | 4.47e-21 | 33 |
neuronal stem cell | 4.47e-21 | 33 |
neuroblast | 4.47e-21 | 33 |
electrically signaling cell | 4.47e-21 | 33 |
electrically responsive cell | 8.86e-18 | 39 |
electrically active cell | 8.86e-18 | 39 |
neural cell | 4.34e-16 | 43 |
ectodermal cell | 1.03e-15 | 44 |
neurectodermal cell | 1.03e-15 | 44 |
striatum neuron | 9.50e-13 | 3 |
granule cell | 1.42e-12 | 3 |
embryonic cell | 1.06e-09 | 70 |
somatic stem cell | 2.51e-07 | 91 |
multi fate stem cell | 2.51e-07 | 91 |
stem cell | 7.79e-07 | 97 |