FFCP PHASE1:Mm9::chr6:124683039..124683050,-: Difference between revisions
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{{FFCP|EntrezGene=15170|HGNC=|MCL_coexpression_id=165|UniProt=G3UXM2|association_with_transcript=49bp_to_ENSMUST00000173647_5end|description=CAGE_peak_6_at_Ptpn6_5end|id=chr6:124683039..124683050,-|ontology_enrichment_celltype=CL:0000988!8.19e-13!32;CL:0002032!8.19e-13!32;CL:0000037!8.19e-13!32;CL:0000566!8.19e-13!32;CL:0000837!8.19e-13!32;CL:0002031!1.27e-09!25;CL:0002320!2.85e-09!46;CL:0000134!2.85e-09!46;CL:0000738!2.41e-08!17;CL:0002087!2.41e-08!17;CL:0000838!2.55e-08!12;CL:0000084!1.83e-07!11;CL:0000827!1.83e-07!11;CL:0000542!2.53e-07!13;CL:0000051!2.53e-07!13;CL:0000049!7.46e-07!19|ontology_enrichment_celltype_v019_2=CL:0000988,7.64e-22,32;CL:0002032,7.64e-22,32;CL:0000037,7.64e-22,32;CL:0000837,7.64e-22,32;CL:0002320,6.78e-19,46;CL:0000134,6.78e-19,46;CL:0000049,3.08e-17,19;CL:0000219,3.60e-15,54;CL:0002031,3.09e-14,25;CL:0000763,1.04e-12,16;CL:0000034,3.32e-11,97;CL:0000723,2.17e-09,91;CL:0000048,2.17e-09,91;CL:0000738,3.37e-09,17;CL:0002087,3.37e-09,17;CL:0000557,5.49e-09,7;CL:0000553,9.53e-09,6;CL:0000556,9.53e-09,6;CL:0000839,1.15e-08,13;CL:0002092,4.28e-07,3;CL:0002540,4.28e-07,3;CL:0000838,6.76e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.69e-07,3;DOID:4045,2.69e-07,3|ontology_enrichment_uberon=UBERON:0002193!1.68e-22!48;UBERON:0002390!1.63e-20!45;UBERON:0003061!1.63e-20!45;UBERON:0002405!1.42e-17!70;UBERON:0004177!6.94e-12!29;UBERON:0003081!5.61e-10!88;UBERON:0002371!1.91e-09!16;UBERON:0002384!2.85e-09!46;UBERON:0003408!9.36e-09!24;UBERON:0002370!2.37e-08!23;UBERON:0000974!2.37e-08!23;UBERON:0004807!2.37e-08!23;UBERON:0005058!2.37e-08!23;UBERON:0003351!2.37e-08!23;UBERON:0009113!2.37e-08!23;UBERON:0003295!2.37e-08!23;UBERON:0009722!2.37e-08!23;UBERON:0005562!2.37e-08!23;UBERON:0007690!2.37e-08!23;UBERON:0005057!2.67e-08!51;UBERON:0001474!3.67e-08!22;UBERON:0004765!3.67e-08!22;UBERON:0001434!3.67e-08!22;UBERON:0006562!1.05e-07!24;UBERON:0001557!1.05e-07!24;UBERON:0001042!1.05e-07!24;UBERON:0008814!1.05e-07!24;UBERON:0009145!1.05e-07!24;UBERON:0001004!1.44e-07!42;UBERON:0000065!3.28e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.32e-22,48;UBERON:0002405,2.32e-22,48;UBERON:0002390,4.06e-22,45;UBERON:0003061,4.06e-22,45;UBERON:0002371,1.21e-21,16;UBERON:0002384,6.78e-19,46;UBERON:0001474,3.53e-17,22;UBERON:0004765,3.53e-17,22;UBERON:0001434,3.53e-17,22;UBERON:0002204,2.13e-16,32;UBERON:0003081,2.66e-09,87;UBERON:0002106,7.65e-08,6;UBERON:0004457,7.65e-08,6;UBERON:0000042,7.65e-08,6;UBERON:0004854,7.65e-08,6;UBERON:0009034,7.65e-08,6;UBERON:0002095,7.65e-08,6;UBERON:0004782,7.65e-08,6;UBERON:0003281,7.65e-08,6;UBERON:0009664,7.65e-08,6;UBERON:0002296,7.65e-08,6;UBERON:0005602,7.65e-08,6;UBERON:0001179,7.65e-08,6;UBERON:0006293,7.65e-08,6;UBERON:0000926,3.08e-07,120;UBERON:0004120,3.08e-07,120;UBERON:0006603,3.08e-07,120|phase1_expression=0,0,0,0,0,0,0.467225281191051,1.29123323441576,0.422366166455,0.936258105287974,0.856089841127525,0.638177271962691,1.36960583944965,1.22388563386596,1.33243904726265,2.22722794128809,0,12.4607555316504,11.1062691220648,7.63901373236454,0.17008658030214,5.16312946244604,3.6567970479451,0.95995453676044,0.91763712426868,0,0,0.215471232685889,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,7.11503772252743,6.2506827561904,4.71171369576418,8.82347232046521,6.14740936462601,6.311634589405,0,0,0,0,0,0,0,0.139986421625363,0,11.2414346058683,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,2.6996991518442,5.93319817540185,5.6838409195688,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.5709193985953,4.91981978929626,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,2.65383165584962,0.161766849947409,0.662524555381181,0,1.86391761218122,0,0,0.255457055208591,2.87556298814209,1.79970819298022,2.54140454146129,0,0.457500602818626,0,0.173824320192276,0,0,0,0.101839363850316,0.995255764880744,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.398068533636986,1.40442637462647,2.31613116403244,1.98914449576915,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.658650345873152,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,0.486405680325106,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0,1.47802552133284,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.491589944147214,1.03610989119537,0.723245292907558,1.50791283939272,4.89515115436839,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.824850614862677,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0,2.56306321196779,0.412773735926445,1.66675074632741,2.0720530270516,2.1871076435364,2.28778173206523,2.20971958992012,1.81936888020755,2.07299960706636,0,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,0,0.632022241256357,0.405450430580328,0.616265742988964,1.03936658382236,0.895133478337407,0.79472541912506,0.600977247599844,1.62458479892035,0.706765149637033,0.533447646584999,1.00826185136841,1.07203668813728,0.673482891482306,1.28564592399726,0,0,0.269141569828427,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0,0,0.385813221962283,0,0.233931608445408,0,0,0.661774257358546,0.463735671240843|short_description=p6@Ptpn6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15170 | |||
|HGNC= | |||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=G3UXM2 | |||
|association_with_transcript=49bp_to_ENSMUST00000173647_5end | |||
|cluster_id=chr6:124683039..124683050,- | |||
|description=CAGE_peak_6_at_Ptpn6_5end | |||
|id=chr6:124683039..124683050,- | |||
|ontology_enrichment_celltype=CL:0000988!8.19e-13!32;CL:0002032!8.19e-13!32;CL:0000037!8.19e-13!32;CL:0000566!8.19e-13!32;CL:0000837!8.19e-13!32;CL:0002031!1.27e-09!25;CL:0002320!2.85e-09!46;CL:0000134!2.85e-09!46;CL:0000738!2.41e-08!17;CL:0002087!2.41e-08!17;CL:0000838!2.55e-08!12;CL:0000084!1.83e-07!11;CL:0000827!1.83e-07!11;CL:0000542!2.53e-07!13;CL:0000051!2.53e-07!13;CL:0000049!7.46e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.64e-22,32;CL:0002032,7.64e-22,32;CL:0000037,7.64e-22,32;CL:0000837,7.64e-22,32;CL:0002320,6.78e-19,46;CL:0000134,6.78e-19,46;CL:0000049,3.08e-17,19;CL:0000219,3.60e-15,54;CL:0002031,3.09e-14,25;CL:0000763,1.04e-12,16;CL:0000034,3.32e-11,97;CL:0000723,2.17e-09,91;CL:0000048,2.17e-09,91;CL:0000738,3.37e-09,17;CL:0002087,3.37e-09,17;CL:0000557,5.49e-09,7;CL:0000553,9.53e-09,6;CL:0000556,9.53e-09,6;CL:0000839,1.15e-08,13;CL:0002092,4.28e-07,3;CL:0002540,4.28e-07,3;CL:0000838,6.76e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.69e-07,3;DOID:4045,2.69e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.68e-22!48;UBERON:0002390!1.63e-20!45;UBERON:0003061!1.63e-20!45;UBERON:0002405!1.42e-17!70;UBERON:0004177!6.94e-12!29;UBERON:0003081!5.61e-10!88;UBERON:0002371!1.91e-09!16;UBERON:0002384!2.85e-09!46;UBERON:0003408!9.36e-09!24;UBERON:0002370!2.37e-08!23;UBERON:0000974!2.37e-08!23;UBERON:0004807!2.37e-08!23;UBERON:0005058!2.37e-08!23;UBERON:0003351!2.37e-08!23;UBERON:0009113!2.37e-08!23;UBERON:0003295!2.37e-08!23;UBERON:0009722!2.37e-08!23;UBERON:0005562!2.37e-08!23;UBERON:0007690!2.37e-08!23;UBERON:0005057!2.67e-08!51;UBERON:0001474!3.67e-08!22;UBERON:0004765!3.67e-08!22;UBERON:0001434!3.67e-08!22;UBERON:0006562!1.05e-07!24;UBERON:0001557!1.05e-07!24;UBERON:0001042!1.05e-07!24;UBERON:0008814!1.05e-07!24;UBERON:0009145!1.05e-07!24;UBERON:0001004!1.44e-07!42;UBERON:0000065!3.28e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.32e-22,48;UBERON:0002405,2.32e-22,48;UBERON:0002390,4.06e-22,45;UBERON:0003061,4.06e-22,45;UBERON:0002371,1.21e-21,16;UBERON:0002384,6.78e-19,46;UBERON:0001474,3.53e-17,22;UBERON:0004765,3.53e-17,22;UBERON:0001434,3.53e-17,22;UBERON:0002204,2.13e-16,32;UBERON:0003081,2.66e-09,87;UBERON:0002106,7.65e-08,6;UBERON:0004457,7.65e-08,6;UBERON:0000042,7.65e-08,6;UBERON:0004854,7.65e-08,6;UBERON:0009034,7.65e-08,6;UBERON:0002095,7.65e-08,6;UBERON:0004782,7.65e-08,6;UBERON:0003281,7.65e-08,6;UBERON:0009664,7.65e-08,6;UBERON:0002296,7.65e-08,6;UBERON:0005602,7.65e-08,6;UBERON:0001179,7.65e-08,6;UBERON:0006293,7.65e-08,6;UBERON:0000926,3.08e-07,120;UBERON:0004120,3.08e-07,120;UBERON:0006603,3.08e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,1.29123323441576,0.422366166455,0.936258105287974,0.856089841127525,0.638177271962691,1.36960583944965,1.22388563386596,1.33243904726265,2.22722794128809,0,12.4607555316504,11.1062691220648,7.63901373236454,0.17008658030214,5.16312946244604,3.6567970479451,0.95995453676044,0.91763712426868,0,0,0.215471232685889,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,7.11503772252743,6.2506827561904,4.71171369576418,8.82347232046521,6.14740936462601,6.311634589405,0,0,0,0,0,0,0,0.139986421625363,0,11.2414346058683,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,2.6996991518442,5.93319817540185,5.6838409195688,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.5709193985953,4.91981978929626,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,2.65383165584962,0.161766849947409,0.662524555381181,0,1.86391761218122,0,0,0.255457055208591,2.87556298814209,1.79970819298022,2.54140454146129,0,0.457500602818626,0,0.173824320192276,0,0,0,0.101839363850316,0.995255764880744,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.398068533636986,1.40442637462647,2.31613116403244,1.98914449576915,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.658650345873152,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,0.486405680325106,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0,1.47802552133284,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.491589944147214,1.03610989119537,0.723245292907558,1.50791283939272,4.89515115436839,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.824850614862677,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0,2.56306321196779,0.412773735926445,1.66675074632741,2.0720530270516,2.1871076435364,2.28778173206523,2.20971958992012,1.81936888020755,2.07299960706636,0,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,0,0.632022241256357,0.405450430580328,0.616265742988964,1.03936658382236,0.895133478337407,0.79472541912506,0.600977247599844,1.62458479892035,0.706765149637033,0.533447646584999,1.00826185136841,1.07203668813728,0.673482891482306,1.28564592399726,0,0,0.269141569828427,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0,0,0.385813221962283,0,0.233931608445408,0,0,0.661774257358546,0.463735671240843 | |||
|short_description=p6@Ptpn6 | |||
}} |
Latest revision as of 15:57, 26 September 2015
Short description: | p6@Ptpn6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ptpn6_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | 49bp_to_ENSMUST00000173647_5end |
EntrezGene: | Ptpn6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.64e-22 | 32 |
hematopoietic oligopotent progenitor cell | 7.64e-22 | 32 |
hematopoietic stem cell | 7.64e-22 | 32 |
hematopoietic multipotent progenitor cell | 7.64e-22 | 32 |
connective tissue cell | 6.78e-19 | 46 |
mesenchymal cell | 6.78e-19 | 46 |
common myeloid progenitor | 3.08e-17 | 19 |
motile cell | 3.60e-15 | 54 |
hematopoietic lineage restricted progenitor cell | 3.09e-14 | 25 |
myeloid cell | 1.04e-12 | 16 |
stem cell | 3.32e-11 | 97 |
somatic stem cell | 2.17e-09 | 91 |
multi fate stem cell | 2.17e-09 | 91 |
leukocyte | 3.37e-09 | 17 |
nongranular leukocyte | 3.37e-09 | 17 |
granulocyte monocyte progenitor cell | 5.49e-09 | 7 |
megakaryocyte progenitor cell | 9.53e-09 | 6 |
megakaryocyte | 9.53e-09 | 6 |
myeloid lineage restricted progenitor cell | 1.15e-08 | 13 |
bone marrow cell | 4.28e-07 | 3 |
mesenchymal stem cell of the bone marrow | 4.28e-07 | 3 |
lymphoid lineage restricted progenitor cell | 6.76e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.32e-22 | 48 |
immune system | 2.32e-22 | 48 |
hematopoietic system | 4.06e-22 | 45 |
blood island | 4.06e-22 | 45 |
bone marrow | 1.21e-21 | 16 |
connective tissue | 6.78e-19 | 46 |
bone element | 3.53e-17 | 22 |
skeletal element | 3.53e-17 | 22 |
skeletal system | 3.53e-17 | 22 |
musculoskeletal system | 2.13e-16 | 32 |
lateral plate mesoderm | 2.66e-09 | 87 |
spleen | 7.65e-08 | 6 |
cavity lining | 7.65e-08 | 6 |
serous membrane | 7.65e-08 | 6 |
gastrointestinal system mesentery | 7.65e-08 | 6 |
stomach region | 7.65e-08 | 6 |
mesentery | 7.65e-08 | 6 |
gastrointestinal system serosa | 7.65e-08 | 6 |
mesentery of stomach | 7.65e-08 | 6 |
gut mesentery | 7.65e-08 | 6 |
dorsal mesentery | 7.65e-08 | 6 |
dorsal mesogastrium | 7.65e-08 | 6 |
peritoneal cavity | 7.65e-08 | 6 |
spleen primordium | 7.65e-08 | 6 |
mesoderm | 3.08e-07 | 120 |
mesoderm-derived structure | 3.08e-07 | 120 |
presumptive mesoderm | 3.08e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.69e-07 | 3 |
muscle cancer | 2.69e-07 | 3 |