FFCP PHASE1:Mm9::chr6:48656532..48656548,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=190|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:48656532..48656548,+|id=chr6:48656532..48656548,+|ontology_enrichment_celltype=CL:0000791!8.03e-21!9;CL:0000789!8.03e-21!9;CL:0002420!8.03e-21!9;CL:0002419!8.03e-21!9;CL:0000790!8.03e-21!9;CL:0000838!3.41e-19!12;CL:0000624!2.24e-18!8;CL:0000893!2.72e-18!6;CL:0002489!2.72e-18!6;CL:0000898!2.72e-18!6;CL:0000809!2.72e-18!6;CL:0000810!2.72e-18!6;CL:0000895!2.72e-18!6;CL:0000808!2.72e-18!6;CL:0000894!2.72e-18!6;CL:0000806!2.72e-18!6;CL:0000807!2.72e-18!6;CL:0000805!2.72e-18!6;CL:0002425!2.72e-18!6;CL:0002436!2.72e-18!6;CL:0002427!2.72e-18!6;CL:0002428!2.72e-18!6;CL:0002429!2.72e-18!6;CL:0002433!2.72e-18!6;CL:0002431!2.72e-18!6;CL:0002432!2.72e-18!6;CL:0000542!1.39e-17!13;CL:0000051!1.39e-17!13;CL:0000084!8.93e-17!11;CL:0000827!8.93e-17!11;CL:0000988!3.29e-15!32;CL:0002032!3.29e-15!32;CL:0000037!3.29e-15!32;CL:0000566!3.29e-15!32;CL:0000837!3.29e-15!32;CL:0002031!6.14e-15!25;CL:0000738!4.94e-13!17;CL:0002087!4.94e-13!17;CL:0002320!3.67e-11!46;CL:0000134!3.67e-11!46;CL:0000219!5.11e-09!54;CL:0000063!8.62e-07!66|ontology_enrichment_celltype_v019_2=CL:0000624,1.63e-59,8;CL:0000893,3.38e-58,6;CL:0002489,3.38e-58,6;CL:0000898,3.38e-58,6;CL:0000809,3.38e-58,6;CL:0000810,3.38e-58,6;CL:0000895,3.38e-58,6;CL:0000808,3.38e-58,6;CL:0000894,3.38e-58,6;CL:0000806,3.38e-58,6;CL:0000807,3.38e-58,6;CL:0000805,3.38e-58,6;CL:0002425,3.38e-58,6;CL:0002436,3.38e-58,6;CL:0002427,3.38e-58,6;CL:0002428,3.38e-58,6;CL:0002429,3.38e-58,6;CL:0002433,3.38e-58,6;CL:0002431,3.38e-58,6;CL:0002432,3.38e-58,6;CL:0000791,6.32e-53,9;CL:0000789,6.32e-53,9;CL:0002420,6.32e-53,9;CL:0002419,6.32e-53,9;CL:0000790,6.32e-53,9;CL:0000084,2.47e-43,11;CL:0000827,2.47e-43,11;CL:0000838,9.83e-40,12;CL:0000542,1.10e-36,13;CL:0000051,1.10e-36,13;CL:0000738,4.50e-28,17;CL:0002087,4.50e-28,17;CL:0002031,9.58e-25,25;CL:0000988,2.60e-19,32;CL:0002032,2.60e-19,32;CL:0000037,2.60e-19,32;CL:0000837,2.60e-19,32;CL:0002320,2.21e-13,46;CL:0000134,2.21e-13,46;CL:0000219,2.30e-11,54;CL:0000815,2.31e-11,1;CL:0000792,2.31e-11,1;CL:0000034,7.32e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.16e-18!23;UBERON:0000974!4.16e-18!23;UBERON:0004807!4.16e-18!23;UBERON:0005058!4.16e-18!23;UBERON:0003351!4.16e-18!23;UBERON:0009113!4.16e-18!23;UBERON:0003295!4.16e-18!23;UBERON:0009722!4.16e-18!23;UBERON:0005562!4.16e-18!23;UBERON:0007690!4.16e-18!23;UBERON:0006562!3.09e-17!24;UBERON:0003408!3.09e-17!24;UBERON:0001557!3.09e-17!24;UBERON:0001042!3.09e-17!24;UBERON:0008814!3.09e-17!24;UBERON:0009145!3.09e-17!24;UBERON:0004177!5.68e-16!29;UBERON:0002193!5.03e-15!48;UBERON:0000072!5.20e-15!27;UBERON:0002390!2.19e-14!45;UBERON:0003061!2.19e-14!45;UBERON:0002384!3.67e-11!46;UBERON:0000063!6.01e-11!35;UBERON:0002405!2.71e-10!70;UBERON:0003081!2.36e-09!88;UBERON:0005057!4.27e-09!51;UBERON:0000065!6.01e-09!41;UBERON:0001004!1.14e-08!42;UBERON:0003929!4.45e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.67e-15,23;UBERON:0000974,2.67e-15,23;UBERON:0004807,2.67e-15,23;UBERON:0005058,2.67e-15,23;UBERON:0003351,2.67e-15,23;UBERON:0009113,2.67e-15,23;UBERON:0003295,2.67e-15,23;UBERON:0009722,2.67e-15,23;UBERON:0005562,2.67e-15,23;UBERON:0007690,2.67e-15,23;UBERON:0006562,1.15e-14,24;UBERON:0003408,1.15e-14,24;UBERON:0001557,1.15e-14,24;UBERON:0001042,1.15e-14,24;UBERON:0008814,1.15e-14,24;UBERON:0009145,1.15e-14,24;UBERON:0002384,2.21e-13,46;UBERON:0000072,4.89e-13,27;UBERON:0004177,3.88e-12,29;UBERON:0005057,3.88e-12,29;UBERON:0002390,1.85e-10,45;UBERON:0003061,1.85e-10,45;UBERON:0000077,4.74e-10,35;UBERON:0002193,8.55e-10,48;UBERON:0002405,8.55e-10,48;UBERON:0007811,9.05e-10,36;UBERON:0000065,1.44e-08,41;UBERON:0001004,2.31e-08,42;UBERON:0000153,3.64e-08,43|phase1_expression=0,0,0,0,0,0,0,6.19791952519566,3.51971805379167,6.55380673701582,1.19852577757853,1.91453181588807,1.54080656938085,1.92324885321794,0,0,0,1.26184866143295,0.548457734422955,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,1.5298058699447,0.979660166265606,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0.295379054349154,0,0.228620419965,0.100826185136841,0.292373642219257,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr6:48656532..48656548,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=190 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:48656532..48656548,+ | |||
|description=CAGE_peak_at_chr6:48656532..48656548,+ | |||
|id=chr6:48656532..48656548,+ | |||
|ontology_enrichment_celltype=CL:0000791!8.03e-21!9;CL:0000789!8.03e-21!9;CL:0002420!8.03e-21!9;CL:0002419!8.03e-21!9;CL:0000790!8.03e-21!9;CL:0000838!3.41e-19!12;CL:0000624!2.24e-18!8;CL:0000893!2.72e-18!6;CL:0002489!2.72e-18!6;CL:0000898!2.72e-18!6;CL:0000809!2.72e-18!6;CL:0000810!2.72e-18!6;CL:0000895!2.72e-18!6;CL:0000808!2.72e-18!6;CL:0000894!2.72e-18!6;CL:0000806!2.72e-18!6;CL:0000807!2.72e-18!6;CL:0000805!2.72e-18!6;CL:0002425!2.72e-18!6;CL:0002436!2.72e-18!6;CL:0002427!2.72e-18!6;CL:0002428!2.72e-18!6;CL:0002429!2.72e-18!6;CL:0002433!2.72e-18!6;CL:0002431!2.72e-18!6;CL:0002432!2.72e-18!6;CL:0000542!1.39e-17!13;CL:0000051!1.39e-17!13;CL:0000084!8.93e-17!11;CL:0000827!8.93e-17!11;CL:0000988!3.29e-15!32;CL:0002032!3.29e-15!32;CL:0000037!3.29e-15!32;CL:0000566!3.29e-15!32;CL:0000837!3.29e-15!32;CL:0002031!6.14e-15!25;CL:0000738!4.94e-13!17;CL:0002087!4.94e-13!17;CL:0002320!3.67e-11!46;CL:0000134!3.67e-11!46;CL:0000219!5.11e-09!54;CL:0000063!8.62e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.63e-59,8;CL:0000893,3.38e-58,6;CL:0002489,3.38e-58,6;CL:0000898,3.38e-58,6;CL:0000809,3.38e-58,6;CL:0000810,3.38e-58,6;CL:0000895,3.38e-58,6;CL:0000808,3.38e-58,6;CL:0000894,3.38e-58,6;CL:0000806,3.38e-58,6;CL:0000807,3.38e-58,6;CL:0000805,3.38e-58,6;CL:0002425,3.38e-58,6;CL:0002436,3.38e-58,6;CL:0002427,3.38e-58,6;CL:0002428,3.38e-58,6;CL:0002429,3.38e-58,6;CL:0002433,3.38e-58,6;CL:0002431,3.38e-58,6;CL:0002432,3.38e-58,6;CL:0000791,6.32e-53,9;CL:0000789,6.32e-53,9;CL:0002420,6.32e-53,9;CL:0002419,6.32e-53,9;CL:0000790,6.32e-53,9;CL:0000084,2.47e-43,11;CL:0000827,2.47e-43,11;CL:0000838,9.83e-40,12;CL:0000542,1.10e-36,13;CL:0000051,1.10e-36,13;CL:0000738,4.50e-28,17;CL:0002087,4.50e-28,17;CL:0002031,9.58e-25,25;CL:0000988,2.60e-19,32;CL:0002032,2.60e-19,32;CL:0000037,2.60e-19,32;CL:0000837,2.60e-19,32;CL:0002320,2.21e-13,46;CL:0000134,2.21e-13,46;CL:0000219,2.30e-11,54;CL:0000815,2.31e-11,1;CL:0000792,2.31e-11,1;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.16e-18!23;UBERON:0000974!4.16e-18!23;UBERON:0004807!4.16e-18!23;UBERON:0005058!4.16e-18!23;UBERON:0003351!4.16e-18!23;UBERON:0009113!4.16e-18!23;UBERON:0003295!4.16e-18!23;UBERON:0009722!4.16e-18!23;UBERON:0005562!4.16e-18!23;UBERON:0007690!4.16e-18!23;UBERON:0006562!3.09e-17!24;UBERON:0003408!3.09e-17!24;UBERON:0001557!3.09e-17!24;UBERON:0001042!3.09e-17!24;UBERON:0008814!3.09e-17!24;UBERON:0009145!3.09e-17!24;UBERON:0004177!5.68e-16!29;UBERON:0002193!5.03e-15!48;UBERON:0000072!5.20e-15!27;UBERON:0002390!2.19e-14!45;UBERON:0003061!2.19e-14!45;UBERON:0002384!3.67e-11!46;UBERON:0000063!6.01e-11!35;UBERON:0002405!2.71e-10!70;UBERON:0003081!2.36e-09!88;UBERON:0005057!4.27e-09!51;UBERON:0000065!6.01e-09!41;UBERON:0001004!1.14e-08!42;UBERON:0003929!4.45e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.67e-15,23;UBERON:0000974,2.67e-15,23;UBERON:0004807,2.67e-15,23;UBERON:0005058,2.67e-15,23;UBERON:0003351,2.67e-15,23;UBERON:0009113,2.67e-15,23;UBERON:0003295,2.67e-15,23;UBERON:0009722,2.67e-15,23;UBERON:0005562,2.67e-15,23;UBERON:0007690,2.67e-15,23;UBERON:0006562,1.15e-14,24;UBERON:0003408,1.15e-14,24;UBERON:0001557,1.15e-14,24;UBERON:0001042,1.15e-14,24;UBERON:0008814,1.15e-14,24;UBERON:0009145,1.15e-14,24;UBERON:0002384,2.21e-13,46;UBERON:0000072,4.89e-13,27;UBERON:0004177,3.88e-12,29;UBERON:0005057,3.88e-12,29;UBERON:0002390,1.85e-10,45;UBERON:0003061,1.85e-10,45;UBERON:0000077,4.74e-10,35;UBERON:0002193,8.55e-10,48;UBERON:0002405,8.55e-10,48;UBERON:0007811,9.05e-10,36;UBERON:0000065,1.44e-08,41;UBERON:0001004,2.31e-08,42;UBERON:0000153,3.64e-08,43 | |||
|phase1_expression=0,0,0,0,0,0,0,6.19791952519566,3.51971805379167,6.55380673701582,1.19852577757853,1.91453181588807,1.54080656938085,1.92324885321794,0,0,0,1.26184866143295,0.548457734422955,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,1.5298058699447,0.979660166265606,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0.295379054349154,0,0.228620419965,0.100826185136841,0.292373642219257,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr6:48656532..48656548,+ | |||
}} |
Latest revision as of 20:15, 5 August 2015
Short description: | p@chr6:48656532..48656548, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:48656532..48656548, + |
Coexpression cluster: | MCL_coexpression_mm9:190 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.67e-15 | 23 |
neck | 2.67e-15 | 23 |
respiratory system epithelium | 2.67e-15 | 23 |
hemolymphoid system gland | 2.67e-15 | 23 |
pharyngeal epithelium | 2.67e-15 | 23 |
thymic region | 2.67e-15 | 23 |
pharyngeal gland | 2.67e-15 | 23 |
entire pharyngeal arch endoderm | 2.67e-15 | 23 |
thymus primordium | 2.67e-15 | 23 |
early pharyngeal endoderm | 2.67e-15 | 23 |
pharynx | 1.15e-14 | 24 |
gland of gut | 1.15e-14 | 24 |
upper respiratory tract | 1.15e-14 | 24 |
chordate pharynx | 1.15e-14 | 24 |
pharyngeal arch system | 1.15e-14 | 24 |
pharyngeal region of foregut | 1.15e-14 | 24 |
connective tissue | 2.21e-13 | 46 |
segment of respiratory tract | 4.89e-13 | 27 |
hemopoietic organ | 3.88e-12 | 29 |
immune organ | 3.88e-12 | 29 |
hematopoietic system | 1.85e-10 | 45 |
blood island | 1.85e-10 | 45 |
mixed endoderm/mesoderm-derived structure | 4.74e-10 | 35 |
hemolymphoid system | 8.55e-10 | 48 |
immune system | 8.55e-10 | 48 |
craniocervical region | 9.05e-10 | 36 |
respiratory tract | 1.44e-08 | 41 |
respiratory system | 2.31e-08 | 42 |
anterior region of body | 3.64e-08 | 43 |