FFCP PHASE1:Mm9::chr6:6821562..6821573,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=184|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:6821562..6821573,-|id=chr6:6821562..6821573,-|ontology_enrichment_celltype=CL:0002609!1.16e-09!6|ontology_enrichment_celltype_v019_2=CL:0002608,3.34e-12,3;CL:0002613,2.57e-11,3;CL:0002609,3.89e-10,6;CL:0000117,6.27e-07,23;CL:0000337,6.27e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!3.24e-18!29;UBERON:0003528!3.24e-18!29;UBERON:0001893!3.24e-18!29;UBERON:0002780!6.67e-18!39;UBERON:0001890!6.67e-18!39;UBERON:0006240!6.67e-18!39;UBERON:0003080!2.87e-17!40;UBERON:0000955!3.75e-15!50;UBERON:0006238!3.75e-15!50;UBERON:0002020!1.29e-14!34;UBERON:0002616!4.88e-14!49;UBERON:0003056!7.82e-14!49;UBERON:0000956!7.62e-13!21;UBERON:0001869!7.62e-13!21;UBERON:0000203!7.62e-13!21;UBERON:0001049!8.47e-13!52;UBERON:0005068!8.47e-13!52;UBERON:0006241!8.47e-13!52;UBERON:0007135!8.47e-13!52;UBERON:0000033!2.62e-11!63;UBERON:0001017!8.64e-09!73;UBERON:0005743!8.64e-09!73;UBERON:0002619!1.17e-08!17;UBERON:0000369!2.17e-08!5;UBERON:0002435!2.17e-08!5;UBERON:0000204!2.17e-08!5;UBERON:0010082!2.17e-08!5;UBERON:0000073!2.33e-08!75;UBERON:0001016!2.33e-08!75;UBERON:0002346!3.57e-08!71;UBERON:0003075!3.57e-08!71;UBERON:0007284!3.57e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.81e-13,29;UBERON:0002791,3.81e-13,29;UBERON:0001893,3.81e-13,29;UBERON:0000369,7.61e-12,5;UBERON:0002435,7.61e-12,5;UBERON:0000204,7.61e-12,5;UBERON:0010082,7.61e-12,5;UBERON:0002780,3.99e-11,39;UBERON:0001890,3.99e-11,39;UBERON:0006240,3.99e-11,39;UBERON:0002020,6.53e-11,34;UBERON:0003080,8.64e-11,40;UBERON:0000955,1.36e-10,47;UBERON:0006238,1.36e-10,47;UBERON:0002616,4.38e-09,46;UBERON:0001954,7.18e-09,7;UBERON:0003022,7.18e-09,7;UBERON:0002421,7.18e-09,7;UBERON:0000349,7.18e-09,7;UBERON:0002600,7.18e-09,7;UBERON:0003056,2.17e-08,49;UBERON:0001049,8.93e-08,52;UBERON:0005068,8.93e-08,52;UBERON:0006241,8.93e-08,52;UBERON:0007135,8.93e-08,52;UBERON:0000956,1.33e-07,21;UBERON:0001869,1.33e-07,21;UBERON:0000203,1.33e-07,21;UBERON:0002420,2.01e-07,8;UBERON:0007245,2.01e-07,8;UBERON:0010009,2.01e-07,8;UBERON:0010011,2.01e-07,8;UBERON:0000454,2.01e-07,8;UBERON:0000073,2.10e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.21505344498522,0.420649922702764,0,0,19.9660002720375,24.6322860516867,6.43453150627015,0,0,0,2.63772575460388,1.28082701043374,1.56274011167028,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,7.28795242254614,1.04294592115366,0.255715457330331,0,1.62241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.71171159412337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.517434735131018,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,2.29158205375759,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.62272408550506,1.19707462020309,2.04880326904961,0.243106717068294,1.46729213839588,0.367687016900028,0.222246727801615,1.03017528619447,0,1.01078884705519,0.50695859978048,0.377252682772152,0.936415074698824,0.768301828858431,0.229741875822453,0,0.695305955669133,0.578727661391115,1.23625770240992,0.294397840268795,0.342869252385415,1.06485483695602,1.43061713968393,1.16277133305863,1.12931256498397,0.423073039458382,1.64635175585495,0.789209134313529,1.08643291076689,0,0.474540072496697,0,0.409231043169689,0.929621047115796,0.192906610981141,1.24905288968973,0.701794825336225,0,0,0,0|short_description=p@chr6:6821562..6821573,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:6821562..6821573,- | |||
|description=CAGE_peak_at_chr6:6821562..6821573,- | |||
|id=chr6:6821562..6821573,- | |||
|ontology_enrichment_celltype=CL:0002609!1.16e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,3.34e-12,3;CL:0002613,2.57e-11,3;CL:0002609,3.89e-10,6;CL:0000117,6.27e-07,23;CL:0000337,6.27e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!3.24e-18!29;UBERON:0003528!3.24e-18!29;UBERON:0001893!3.24e-18!29;UBERON:0002780!6.67e-18!39;UBERON:0001890!6.67e-18!39;UBERON:0006240!6.67e-18!39;UBERON:0003080!2.87e-17!40;UBERON:0000955!3.75e-15!50;UBERON:0006238!3.75e-15!50;UBERON:0002020!1.29e-14!34;UBERON:0002616!4.88e-14!49;UBERON:0003056!7.82e-14!49;UBERON:0000956!7.62e-13!21;UBERON:0001869!7.62e-13!21;UBERON:0000203!7.62e-13!21;UBERON:0001049!8.47e-13!52;UBERON:0005068!8.47e-13!52;UBERON:0006241!8.47e-13!52;UBERON:0007135!8.47e-13!52;UBERON:0000033!2.62e-11!63;UBERON:0001017!8.64e-09!73;UBERON:0005743!8.64e-09!73;UBERON:0002619!1.17e-08!17;UBERON:0000369!2.17e-08!5;UBERON:0002435!2.17e-08!5;UBERON:0000204!2.17e-08!5;UBERON:0010082!2.17e-08!5;UBERON:0000073!2.33e-08!75;UBERON:0001016!2.33e-08!75;UBERON:0002346!3.57e-08!71;UBERON:0003075!3.57e-08!71;UBERON:0007284!3.57e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.81e-13,29;UBERON:0002791,3.81e-13,29;UBERON:0001893,3.81e-13,29;UBERON:0000369,7.61e-12,5;UBERON:0002435,7.61e-12,5;UBERON:0000204,7.61e-12,5;UBERON:0010082,7.61e-12,5;UBERON:0002780,3.99e-11,39;UBERON:0001890,3.99e-11,39;UBERON:0006240,3.99e-11,39;UBERON:0002020,6.53e-11,34;UBERON:0003080,8.64e-11,40;UBERON:0000955,1.36e-10,47;UBERON:0006238,1.36e-10,47;UBERON:0002616,4.38e-09,46;UBERON:0001954,7.18e-09,7;UBERON:0003022,7.18e-09,7;UBERON:0002421,7.18e-09,7;UBERON:0000349,7.18e-09,7;UBERON:0002600,7.18e-09,7;UBERON:0003056,2.17e-08,49;UBERON:0001049,8.93e-08,52;UBERON:0005068,8.93e-08,52;UBERON:0006241,8.93e-08,52;UBERON:0007135,8.93e-08,52;UBERON:0000956,1.33e-07,21;UBERON:0001869,1.33e-07,21;UBERON:0000203,1.33e-07,21;UBERON:0002420,2.01e-07,8;UBERON:0007245,2.01e-07,8;UBERON:0010009,2.01e-07,8;UBERON:0010011,2.01e-07,8;UBERON:0000454,2.01e-07,8;UBERON:0000073,2.10e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.21505344498522,0.420649922702764,0,0,19.9660002720375,24.6322860516867,6.43453150627015,0,0,0,2.63772575460388,1.28082701043374,1.56274011167028,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,7.28795242254614,1.04294592115366,0.255715457330331,0,1.62241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.71171159412337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.517434735131018,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,2.29158205375759,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.62272408550506,1.19707462020309,2.04880326904961,0.243106717068294,1.46729213839588,0.367687016900028,0.222246727801615,1.03017528619447,0,1.01078884705519,0.50695859978048,0.377252682772152,0.936415074698824,0.768301828858431,0.229741875822453,0,0.695305955669133,0.578727661391115,1.23625770240992,0.294397840268795,0.342869252385415,1.06485483695602,1.43061713968393,1.16277133305863,1.12931256498397,0.423073039458382,1.64635175585495,0.789209134313529,1.08643291076689,0,0.474540072496697,0,0.409231043169689,0.929621047115796,0.192906610981141,1.24905288968973,0.701794825336225,0,0,0,0 | |||
|short_description=p@chr6:6821562..6821573,- | |||
}} |
Latest revision as of 01:20, 6 August 2015
Short description: | p@chr6:6821562..6821573, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:6821562..6821573, - |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 3.34e-12 | 3 |
striatum neuron | 2.57e-11 | 3 |
neuron of cerebral cortex | 3.89e-10 | 6 |
CNS neuron (sensu Vertebrata) | 6.27e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.27e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 3.81e-13 | 29 |
regional part of telencephalon | 3.81e-13 | 29 |
telencephalon | 3.81e-13 | 29 |
corpus striatum | 7.61e-12 | 5 |
striatum | 7.61e-12 | 5 |
ventral part of telencephalon | 7.61e-12 | 5 |
future corpus striatum | 7.61e-12 | 5 |
regional part of forebrain | 3.99e-11 | 39 |
forebrain | 3.99e-11 | 39 |
future forebrain | 3.99e-11 | 39 |
gray matter | 6.53e-11 | 34 |
anterior neural tube | 8.64e-11 | 40 |
brain | 1.36e-10 | 47 |
future brain | 1.36e-10 | 47 |
regional part of brain | 4.38e-09 | 46 |
Ammon's horn | 7.18e-09 | 7 |
lobe parts of cerebral cortex | 7.18e-09 | 7 |
hippocampal formation | 7.18e-09 | 7 |
limbic system | 7.18e-09 | 7 |
limbic lobe | 7.18e-09 | 7 |
pre-chordal neural plate | 2.17e-08 | 49 |
neural tube | 8.93e-08 | 52 |
neural rod | 8.93e-08 | 52 |
future spinal cord | 8.93e-08 | 52 |
neural keel | 8.93e-08 | 52 |
cerebral cortex | 1.33e-07 | 21 |
cerebral hemisphere | 1.33e-07 | 21 |
pallium | 1.33e-07 | 21 |
basal ganglion | 2.01e-07 | 8 |
nuclear complex of neuraxis | 2.01e-07 | 8 |
aggregate regional part of brain | 2.01e-07 | 8 |
collection of basal ganglia | 2.01e-07 | 8 |
cerebral subcortex | 2.01e-07 | 8 |
regional part of nervous system | 2.10e-07 | 54 |