FFCP PHASE1:Mm9::chr7:17200403..17200416,-: Difference between revisions
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{{FFCP|EntrezGene=232906|HGNC=|MCL_coexpression_id=1|UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8|association_with_transcript=-61bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end|description=CAGE_peak_5_at_Grlf1_5end|id=chr7:17200403..17200416,-|ontology_enrichment_celltype=CL:0000540!1.29e-13!33;CL:0000047!1.29e-13!33;CL:0000031!1.29e-13!33;CL:0000404!1.29e-13!33;CL:0000117!1.27e-12!23;CL:0000337!1.27e-12!23;CL:0000393!1.38e-12!39;CL:0000211!1.38e-12!39;CL:0000221!4.10e-11!44;CL:0000133!4.10e-11!44;CL:0002319!4.72e-11!43;CL:0000055!1.18e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.84e-19,23;CL:0000337,1.84e-19,23;CL:0000540,1.75e-18,33;CL:0000047,1.75e-18,33;CL:0000031,1.75e-18,33;CL:0000404,1.75e-18,33;CL:0000393,3.53e-16,39;CL:0000211,3.53e-16,39;CL:0002319,1.91e-15,43;CL:0000221,7.42e-15,44;CL:0000133,7.42e-15,44;CL:0002321,1.39e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.58e-26!73;UBERON:0005743!3.58e-26!73;UBERON:0000073!5.12e-25!75;UBERON:0001016!5.12e-25!75;UBERON:0001049!2.36e-20!52;UBERON:0005068!2.36e-20!52;UBERON:0006241!2.36e-20!52;UBERON:0007135!2.36e-20!52;UBERON:0000033!3.56e-20!63;UBERON:0000955!1.25e-19!50;UBERON:0006238!1.25e-19!50;UBERON:0004121!2.29e-19!102;UBERON:0000924!2.29e-19!102;UBERON:0006601!2.29e-19!102;UBERON:0002346!4.06e-19!71;UBERON:0003075!4.06e-19!71;UBERON:0007284!4.06e-19!71;UBERON:0002616!4.28e-19!49;UBERON:0003056!9.00e-17!49;UBERON:0002020!1.31e-16!34;UBERON:0003080!4.85e-16!40;UBERON:0002780!1.18e-15!39;UBERON:0001890!1.18e-15!39;UBERON:0006240!1.18e-15!39;UBERON:0002791!4.38e-14!29;UBERON:0003528!4.38e-14!29;UBERON:0001893!4.38e-14!29;UBERON:0000153!2.60e-13!94;UBERON:0007811!3.24e-13!86;UBERON:0000025!3.50e-13!114;UBERON:0004111!4.00e-12!122;UBERON:0000956!8.72e-11!21;UBERON:0001869!8.72e-11!21;UBERON:0000203!8.72e-11!21;UBERON:0002619!5.04e-09!17;UBERON:0002021!4.52e-08!10;UBERON:0000411!4.52e-08!10;UBERON:0001950!4.52e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.81e-35,73;UBERON:0001016,2.26e-33,75;UBERON:0000073,2.50e-29,54;UBERON:0002346,2.44e-27,64;UBERON:0003075,2.44e-27,64;UBERON:0007284,2.44e-27,64;UBERON:0001049,4.43e-27,52;UBERON:0005068,4.43e-27,52;UBERON:0006241,4.43e-27,52;UBERON:0007135,4.43e-27,52;UBERON:0004121,2.23e-26,95;UBERON:0000924,2.23e-26,95;UBERON:0006601,2.23e-26,95;UBERON:0002020,6.17e-26,34;UBERON:0010314,3.14e-23,92;UBERON:0010371,3.46e-23,73;UBERON:0000955,9.75e-23,47;UBERON:0006238,9.75e-23,47;UBERON:0002616,6.43e-22,46;UBERON:0003528,9.34e-22,29;UBERON:0002791,9.34e-22,29;UBERON:0001893,9.34e-22,29;UBERON:0003080,1.33e-21,40;UBERON:0002780,5.66e-21,39;UBERON:0001890,5.66e-21,39;UBERON:0006240,5.66e-21,39;UBERON:0003056,5.19e-20,49;UBERON:0000956,1.11e-16,21;UBERON:0001869,1.11e-16,21;UBERON:0000203,1.11e-16,21;UBERON:0000025,2.59e-14,114;UBERON:0002619,9.10e-14,17;UBERON:0004111,4.95e-13,122;UBERON:0002021,2.42e-12,10;UBERON:0000411,2.42e-12,10;UBERON:0001950,2.42e-12,10;UBERON:0000483,1.06e-08,174;UBERON:0000119,2.16e-08,176|phase1_expression=2.08193501236232,0.348975407639361,0,0.30246421130683,0,0.671517087647559,0,0.774739940649458,0.422366166455,0.70219357896598,0.171217968225505,0.239316476986009,0.342401459862411,0.34968160967599,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0,1.27564935226605,0.297872853602656,0,0.159992422793407,0,0,0,0.646413698057667,0,0,0,1.90509202037889,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,0.503587271902309,0.608261587317087,0.367093504323363,2.34717403304412,0.436050312760893,0.439372365468944,0.388859798148567,0.139986421625363,1.43752564364972,0.838913030288682,0,1.34437519656986,1.02903774414379,0.573066879877513,1.03134418455488,3.23706337375356,3.70293685490423,5.70448263155561,0.677689064138264,0,0,0,0,0.299600110518405,1.53687322128622,1.97010263386108,1.75507719831198,1.68259969081106,2.85650984403804,1.32521124570968,2.69479758272899,1.62937300731002,4.5960939330501,14.3150645299205,4.08599481872601,4.30098293117482,3.29715719325485,2.19570344645783,3.64639359389732,4.18774498502071,0.56276261003168,3.20876320331301,2.65165726926301,2.13557521198654,3.54158947068071,0.37863096666592,0.302286240427142,0.579728977403356,0.860423876981386,0,2.69851595818909,0,0.448026887097336,0.561777680527007,0,0,0.35333957451034,0.845060518660083,1.28326477414318,2.54805239706646,0,0.432982082022428,0.506719730950197,1.01104889002957,0.22836775943812,0,0.742210695324124,0.173485326766136,0.304465478312141,0,0.301445281105245,0.940709657085638,0.376999773989026,0.741584903203122,0.289198713839823,0,0.808834249737046,0.220841518460394,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0.479260498023681,0,0.127070227073065,1.49790639404823,1.37250180845588,3.01570445070875,2.43354048269187,2.55715457330331,3.1168206683934,3.56930778749067,0.203678727700633,0.248813941220186,0.252722758433675,0.841767423545896,0.910843100738926,0.459804208866946,0.540186389416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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232906 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8 | |||
|association_with_transcript=-61bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end | |||
|cluster_id=chr7:17200403..17200416,- | |||
|description=CAGE_peak_5_at_Grlf1_5end | |||
|id=chr7:17200403..17200416,- | |||
|ontology_enrichment_celltype=CL:0000540!1.29e-13!33;CL:0000047!1.29e-13!33;CL:0000031!1.29e-13!33;CL:0000404!1.29e-13!33;CL:0000117!1.27e-12!23;CL:0000337!1.27e-12!23;CL:0000393!1.38e-12!39;CL:0000211!1.38e-12!39;CL:0000221!4.10e-11!44;CL:0000133!4.10e-11!44;CL:0002319!4.72e-11!43;CL:0000055!1.18e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.84e-19,23;CL:0000337,1.84e-19,23;CL:0000540,1.75e-18,33;CL:0000047,1.75e-18,33;CL:0000031,1.75e-18,33;CL:0000404,1.75e-18,33;CL:0000393,3.53e-16,39;CL:0000211,3.53e-16,39;CL:0002319,1.91e-15,43;CL:0000221,7.42e-15,44;CL:0000133,7.42e-15,44;CL:0002321,1.39e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.58e-26!73;UBERON:0005743!3.58e-26!73;UBERON:0000073!5.12e-25!75;UBERON:0001016!5.12e-25!75;UBERON:0001049!2.36e-20!52;UBERON:0005068!2.36e-20!52;UBERON:0006241!2.36e-20!52;UBERON:0007135!2.36e-20!52;UBERON:0000033!3.56e-20!63;UBERON:0000955!1.25e-19!50;UBERON:0006238!1.25e-19!50;UBERON:0004121!2.29e-19!102;UBERON:0000924!2.29e-19!102;UBERON:0006601!2.29e-19!102;UBERON:0002346!4.06e-19!71;UBERON:0003075!4.06e-19!71;UBERON:0007284!4.06e-19!71;UBERON:0002616!4.28e-19!49;UBERON:0003056!9.00e-17!49;UBERON:0002020!1.31e-16!34;UBERON:0003080!4.85e-16!40;UBERON:0002780!1.18e-15!39;UBERON:0001890!1.18e-15!39;UBERON:0006240!1.18e-15!39;UBERON:0002791!4.38e-14!29;UBERON:0003528!4.38e-14!29;UBERON:0001893!4.38e-14!29;UBERON:0000153!2.60e-13!94;UBERON:0007811!3.24e-13!86;UBERON:0000025!3.50e-13!114;UBERON:0004111!4.00e-12!122;UBERON:0000956!8.72e-11!21;UBERON:0001869!8.72e-11!21;UBERON:0000203!8.72e-11!21;UBERON:0002619!5.04e-09!17;UBERON:0002021!4.52e-08!10;UBERON:0000411!4.52e-08!10;UBERON:0001950!4.52e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.81e-35,73;UBERON:0001016,2.26e-33,75;UBERON:0000073,2.50e-29,54;UBERON:0002346,2.44e-27,64;UBERON:0003075,2.44e-27,64;UBERON:0007284,2.44e-27,64;UBERON:0001049,4.43e-27,52;UBERON:0005068,4.43e-27,52;UBERON:0006241,4.43e-27,52;UBERON:0007135,4.43e-27,52;UBERON:0004121,2.23e-26,95;UBERON:0000924,2.23e-26,95;UBERON:0006601,2.23e-26,95;UBERON:0002020,6.17e-26,34;UBERON:0010314,3.14e-23,92;UBERON:0010371,3.46e-23,73;UBERON:0000955,9.75e-23,47;UBERON:0006238,9.75e-23,47;UBERON:0002616,6.43e-22,46;UBERON:0003528,9.34e-22,29;UBERON:0002791,9.34e-22,29;UBERON:0001893,9.34e-22,29;UBERON:0003080,1.33e-21,40;UBERON:0002780,5.66e-21,39;UBERON:0001890,5.66e-21,39;UBERON:0006240,5.66e-21,39;UBERON:0003056,5.19e-20,49;UBERON:0000956,1.11e-16,21;UBERON:0001869,1.11e-16,21;UBERON:0000203,1.11e-16,21;UBERON:0000025,2.59e-14,114;UBERON:0002619,9.10e-14,17;UBERON:0004111,4.95e-13,122;UBERON:0002021,2.42e-12,10;UBERON:0000411,2.42e-12,10;UBERON:0001950,2.42e-12,10;UBERON:0000483,1.06e-08,174;UBERON:0000119,2.16e-08,176 | |||
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| |||
|short_description=p5@Grlf1 | |||
}} |
Latest revision as of 07:09, 26 September 2015
Short description: | p5@Grlf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Grlf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -61bp_to_ENSMUST00000075845, NM_172739, uc009fhw.1_5end |
EntrezGene: | Grlf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.84e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.84e-19 | 23 |
neuron | 1.75e-18 | 33 |
neuronal stem cell | 1.75e-18 | 33 |
neuroblast | 1.75e-18 | 33 |
electrically signaling cell | 1.75e-18 | 33 |
electrically responsive cell | 3.53e-16 | 39 |
electrically active cell | 3.53e-16 | 39 |
neural cell | 1.91e-15 | 43 |
ectodermal cell | 7.42e-15 | 44 |
neurectodermal cell | 7.42e-15 | 44 |
embryonic cell | 1.39e-09 | 70 |