FFCP PHASE1:Mm9::chr7:38105060..38105065,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1346|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:38105060..38105065,-|id=chr7:38105060..38105065,-|ontology_enrichment_celltype=CL:0000540!5.74e-25!33;CL:0000047!5.74e-25!33;CL:0000031!5.74e-25!33;CL:0000404!5.74e-25!33;CL:0002319!8.23e-25!43;CL:0000221!7.32e-24!44;CL:0000133!7.32e-24!44;CL:0000055!5.17e-19!50;CL:0000393!6.64e-19!39;CL:0000211!6.64e-19!39;CL:0000117!5.01e-18!23;CL:0000337!5.01e-18!23;CL:0002321!2.49e-09!70;CL:0000220!2.49e-09!70;CL:0000107!1.50e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,5.54e-39,33;CL:0000047,5.54e-39,33;CL:0000031,5.54e-39,33;CL:0000404,5.54e-39,33;CL:0000393,2.03e-32,39;CL:0000211,2.03e-32,39;CL:0002319,2.54e-32,43;CL:0000117,4.61e-32,23;CL:0000337,4.61e-32,23;CL:0000221,1.68e-31,44;CL:0000133,1.68e-31,44;CL:0002321,2.32e-18,70;CL:0002609,3.36e-14,6;CL:0002612,8.99e-12,3;CL:0000723,9.99e-12,91;CL:0000048,9.99e-12,91;CL:0002613,2.19e-11,3;CL:0002608,3.02e-11,3;CL:0000034,9.20e-11,97;CL:0000107,3.40e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.08e-29!102;UBERON:0000924!1.08e-29!102;UBERON:0006601!1.08e-29!102;UBERON:0000073!1.87e-29!75;UBERON:0001016!1.87e-29!75;UBERON:0001017!5.21e-28!73;UBERON:0005743!5.21e-28!73;UBERON:0002346!5.35e-19!71;UBERON:0003075!5.35e-19!71;UBERON:0007284!5.35e-19!71;UBERON:0000033!7.01e-16!63;UBERON:0001049!1.25e-15!52;UBERON:0005068!1.25e-15!52;UBERON:0006241!1.25e-15!52;UBERON:0007135!1.25e-15!52;UBERON:0003056!1.77e-14!49;UBERON:0000955!6.12e-13!50;UBERON:0006238!6.12e-13!50;UBERON:0002616!2.24e-12!49;UBERON:0002020!3.90e-12!34;UBERON:0003080!1.41e-11!40;UBERON:0002780!2.07e-11!39;UBERON:0001890!2.07e-11!39;UBERON:0006240!2.07e-11!39;UBERON:0000010!9.27e-09!11;UBERON:0002791!1.48e-08!29;UBERON:0003528!1.48e-08!29;UBERON:0001893!1.48e-08!29;UBERON:0007811!2.34e-08!86;UBERON:0002410!1.50e-07!9;UBERON:0000153!5.57e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.64e-21,73;UBERON:0001016,7.90e-21,75;UBERON:0004121,5.52e-19,95;UBERON:0000924,5.52e-19,95;UBERON:0006601,5.52e-19,95;UBERON:0002020,1.08e-12,34;UBERON:0002346,1.91e-12,64;UBERON:0003075,1.91e-12,64;UBERON:0007284,1.91e-12,64;UBERON:0002257,8.99e-12,3;UBERON:0000073,9.30e-12,54;UBERON:0000013,5.68e-11,3;UBERON:0001049,1.48e-10,52;UBERON:0005068,1.48e-10,52;UBERON:0006241,1.48e-10,52;UBERON:0007135,1.48e-10,52;UBERON:0010371,1.68e-10,73;UBERON:0002410,3.40e-09,9;UBERON:0003528,3.06e-08,29;UBERON:0002791,3.06e-08,29;UBERON:0001893,3.06e-08,29;UBERON:0003056,5.87e-08,49;UBERON:0010314,1.20e-07,92;UBERON:0000010,1.76e-07,11;UBERON:0001948,3.19e-07,5;UBERON:0002315,3.19e-07,5;UBERON:0002780,3.20e-07,39;UBERON:0001890,3.20e-07,39;UBERON:0006240,3.20e-07,39;UBERON:0002616,3.84e-07,46;UBERON:0002420,3.85e-07,8;UBERON:0007245,3.85e-07,8;UBERON:0010009,3.85e-07,8;UBERON:0010011,3.85e-07,8;UBERON:0000454,3.85e-07,8;UBERON:0003080,5.35e-07,40;UBERON:0000369,5.36e-07,5;UBERON:0002435,5.36e-07,5;UBERON:0000204,5.36e-07,5;UBERON:0010082,5.36e-07,5;UBERON:0000955,5.98e-07,47;UBERON:0006238,5.98e-07,47|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,1.43752564364972,0,0,0,0,0,0,2.22548106945558,3.70293685490423,0.633831403506179,0,0,0,0,0,0.898800331555214,0.384218305321555,1.03689612308478,1.21505344498522,0.841299845405528,0.856952953211411,0.883474163806454,1.22490799214954,1.24599112323707,1.83843757322004,0,1.53224805702225,0.768032666281217,2.37395317914349,1.18933936683133,1.56274011167028,0.558365998002762,1.12552522006336,0.763991238884051,2.06240009831567,1.42371680799103,3.54158947068071,0.530083353332288,0.831287161174641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0.879580464790051,0.173824320192276,0.511430914660661,0.41557608911912,0.811206315338788,0,0,0,0,0.650602214813519,0,0.180062129805349,1.65775299619287,0.680364991513279,0.896796041993948,1.03071897015702,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0.823236899034275,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0.642202359951168,1.17211686592203,0,0,0.315508219416257,1.17131623288992,0.430846795465598,0.477937595905104,0.891194696329576,1.13230612315533,1.21443210502468,1.75353514746787,1.18586333383957,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,1.70219802876894,0.36012218806262,0.517434735131018,0.643011105094777,0.532020700926821,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.648032044930808,0.418176592028937,0.218362563746178,0.404593039154462,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0,0.337912250981556,0.117357238645754,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,1.02860775715625,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0,0,0,0|short_description=p@chr7:38105060..38105065,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1346 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:38105060..38105065,- | |||
|description=CAGE_peak_at_chr7:38105060..38105065,- | |||
|id=chr7:38105060..38105065,- | |||
|ontology_enrichment_celltype=CL:0000540!5.74e-25!33;CL:0000047!5.74e-25!33;CL:0000031!5.74e-25!33;CL:0000404!5.74e-25!33;CL:0002319!8.23e-25!43;CL:0000221!7.32e-24!44;CL:0000133!7.32e-24!44;CL:0000055!5.17e-19!50;CL:0000393!6.64e-19!39;CL:0000211!6.64e-19!39;CL:0000117!5.01e-18!23;CL:0000337!5.01e-18!23;CL:0002321!2.49e-09!70;CL:0000220!2.49e-09!70;CL:0000107!1.50e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.54e-39,33;CL:0000047,5.54e-39,33;CL:0000031,5.54e-39,33;CL:0000404,5.54e-39,33;CL:0000393,2.03e-32,39;CL:0000211,2.03e-32,39;CL:0002319,2.54e-32,43;CL:0000117,4.61e-32,23;CL:0000337,4.61e-32,23;CL:0000221,1.68e-31,44;CL:0000133,1.68e-31,44;CL:0002321,2.32e-18,70;CL:0002609,3.36e-14,6;CL:0002612,8.99e-12,3;CL:0000723,9.99e-12,91;CL:0000048,9.99e-12,91;CL:0002613,2.19e-11,3;CL:0002608,3.02e-11,3;CL:0000034,9.20e-11,97;CL:0000107,3.40e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.08e-29!102;UBERON:0000924!1.08e-29!102;UBERON:0006601!1.08e-29!102;UBERON:0000073!1.87e-29!75;UBERON:0001016!1.87e-29!75;UBERON:0001017!5.21e-28!73;UBERON:0005743!5.21e-28!73;UBERON:0002346!5.35e-19!71;UBERON:0003075!5.35e-19!71;UBERON:0007284!5.35e-19!71;UBERON:0000033!7.01e-16!63;UBERON:0001049!1.25e-15!52;UBERON:0005068!1.25e-15!52;UBERON:0006241!1.25e-15!52;UBERON:0007135!1.25e-15!52;UBERON:0003056!1.77e-14!49;UBERON:0000955!6.12e-13!50;UBERON:0006238!6.12e-13!50;UBERON:0002616!2.24e-12!49;UBERON:0002020!3.90e-12!34;UBERON:0003080!1.41e-11!40;UBERON:0002780!2.07e-11!39;UBERON:0001890!2.07e-11!39;UBERON:0006240!2.07e-11!39;UBERON:0000010!9.27e-09!11;UBERON:0002791!1.48e-08!29;UBERON:0003528!1.48e-08!29;UBERON:0001893!1.48e-08!29;UBERON:0007811!2.34e-08!86;UBERON:0002410!1.50e-07!9;UBERON:0000153!5.57e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.64e-21,73;UBERON:0001016,7.90e-21,75;UBERON:0004121,5.52e-19,95;UBERON:0000924,5.52e-19,95;UBERON:0006601,5.52e-19,95;UBERON:0002020,1.08e-12,34;UBERON:0002346,1.91e-12,64;UBERON:0003075,1.91e-12,64;UBERON:0007284,1.91e-12,64;UBERON:0002257,8.99e-12,3;UBERON:0000073,9.30e-12,54;UBERON:0000013,5.68e-11,3;UBERON:0001049,1.48e-10,52;UBERON:0005068,1.48e-10,52;UBERON:0006241,1.48e-10,52;UBERON:0007135,1.48e-10,52;UBERON:0010371,1.68e-10,73;UBERON:0002410,3.40e-09,9;UBERON:0003528,3.06e-08,29;UBERON:0002791,3.06e-08,29;UBERON:0001893,3.06e-08,29;UBERON:0003056,5.87e-08,49;UBERON:0010314,1.20e-07,92;UBERON:0000010,1.76e-07,11;UBERON:0001948,3.19e-07,5;UBERON:0002315,3.19e-07,5;UBERON:0002780,3.20e-07,39;UBERON:0001890,3.20e-07,39;UBERON:0006240,3.20e-07,39;UBERON:0002616,3.84e-07,46;UBERON:0002420,3.85e-07,8;UBERON:0007245,3.85e-07,8;UBERON:0010009,3.85e-07,8;UBERON:0010011,3.85e-07,8;UBERON:0000454,3.85e-07,8;UBERON:0003080,5.35e-07,40;UBERON:0000369,5.36e-07,5;UBERON:0002435,5.36e-07,5;UBERON:0000204,5.36e-07,5;UBERON:0010082,5.36e-07,5;UBERON:0000955,5.98e-07,47;UBERON:0006238,5.98e-07,47 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,1.43752564364972,0,0,0,0,0,0,2.22548106945558,3.70293685490423,0.633831403506179,0,0,0,0,0,0.898800331555214,0.384218305321555,1.03689612308478,1.21505344498522,0.841299845405528,0.856952953211411,0.883474163806454,1.22490799214954,1.24599112323707,1.83843757322004,0,1.53224805702225,0.768032666281217,2.37395317914349,1.18933936683133,1.56274011167028,0.558365998002762,1.12552522006336,0.763991238884051,2.06240009831567,1.42371680799103,3.54158947068071,0.530083353332288,0.831287161174641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0.879580464790051,0.173824320192276,0.511430914660661,0.41557608911912,0.811206315338788,0,0,0,0,0.650602214813519,0,0.180062129805349,1.65775299619287,0.680364991513279,0.896796041993948,1.03071897015702,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0.823236899034275,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0.642202359951168,1.17211686592203,0,0,0.315508219416257,1.17131623288992,0.430846795465598,0.477937595905104,0.891194696329576,1.13230612315533,1.21443210502468,1.75353514746787,1.18586333383957,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,1.70219802876894,0.36012218806262,0.517434735131018,0.643011105094777,0.532020700926821,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.648032044930808,0.418176592028937,0.218362563746178,0.404593039154462,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0,0.337912250981556,0.117357238645754,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,1.02860775715625,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p@chr7:38105060..38105065,- | |||
}} |
Latest revision as of 03:43, 5 August 2015
Short description: | p@chr7:38105060..38105065, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:38105060..38105065, - |
Coexpression cluster: | MCL_coexpression_mm9:1346 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.54e-39 | 33 |
neuronal stem cell | 5.54e-39 | 33 |
neuroblast | 5.54e-39 | 33 |
electrically signaling cell | 5.54e-39 | 33 |
electrically responsive cell | 2.03e-32 | 39 |
electrically active cell | 2.03e-32 | 39 |
neural cell | 2.54e-32 | 43 |
CNS neuron (sensu Vertebrata) | 4.61e-32 | 23 |
neuroblast (sensu Vertebrata) | 4.61e-32 | 23 |
ectodermal cell | 1.68e-31 | 44 |
neurectodermal cell | 1.68e-31 | 44 |
embryonic cell | 2.32e-18 | 70 |
neuron of cerebral cortex | 3.36e-14 | 6 |
neuron of the ventral spinal cord | 8.99e-12 | 3 |
somatic stem cell | 9.99e-12 | 91 |
multi fate stem cell | 9.99e-12 | 91 |
striatum neuron | 2.19e-11 | 3 |
hippocampal neuron | 3.02e-11 | 3 |
stem cell | 9.20e-11 | 97 |
autonomic neuron | 3.40e-09 | 9 |