FFCP PHASE1:Mm9::chr7:88517306..88517344,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12877|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=0bp_to_ENSMUST00000153419_5end|description=CAGE_peak_2_at_Cpeb1_5end|id=chr7:88517306..88517344,-|ontology_enrichment_celltype=CL:0000393!1.15e-11!39;CL:0000211!1.15e-11!39;CL:0000540!1.50e-11!33;CL:0000047!1.50e-11!33;CL:0000031!1.50e-11!33;CL:0000404!1.50e-11!33;CL:0000221!1.95e-11!44;CL:0000133!1.95e-11!44;CL:0002319!2.04e-11!43;CL:0000055!3.40e-11!50;CL:0000117!5.06e-08!23;CL:0000337!5.06e-08!23|ontology_enrichment_celltype_v019_2=CL:0000540,1.51e-13,33;CL:0000047,1.51e-13,33;CL:0000031,1.51e-13,33;CL:0000404,1.51e-13,33;CL:0000393,6.20e-13,39;CL:0000211,6.20e-13,39;CL:0002319,1.70e-12,43;CL:0000221,4.57e-12,44;CL:0000133,4.57e-12,44;CL:0000107,2.07e-08,9;CL:0000117,9.27e-08,23;CL:0000337,9.27e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.31e-26!102;UBERON:0000924!5.31e-26!102;UBERON:0006601!5.31e-26!102;UBERON:0000073!5.71e-24!75;UBERON:0001016!5.71e-24!75;UBERON:0001017!2.29e-23!73;UBERON:0005743!2.29e-23!73;UBERON:0002346!9.59e-19!71;UBERON:0003075!9.59e-19!71;UBERON:0007284!9.59e-19!71;UBERON:0000033!1.51e-17!63;UBERON:0002020!9.63e-15!34;UBERON:0001049!1.07e-14!52;UBERON:0005068!1.07e-14!52;UBERON:0006241!1.07e-14!52;UBERON:0007135!1.07e-14!52;UBERON:0000955!2.83e-14!50;UBERON:0006238!2.83e-14!50;UBERON:0002616!1.23e-13!49;UBERON:0003056!2.80e-13!49;UBERON:0002791!2.22e-12!29;UBERON:0003528!2.22e-12!29;UBERON:0001893!2.22e-12!29;UBERON:0003080!2.25e-10!40;UBERON:0002780!9.41e-10!39;UBERON:0001890!9.41e-10!39;UBERON:0006240!9.41e-10!39;UBERON:0002021!8.35e-09!10;UBERON:0000411!8.35e-09!10;UBERON:0001950!8.35e-09!10;UBERON:0002619!3.50e-08!17;UBERON:0000956!3.53e-08!21;UBERON:0001869!3.53e-08!21;UBERON:0000203!3.53e-08!21;UBERON:0007811!3.98e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.58e-33,75;UBERON:0001017,6.28e-33,73;UBERON:0004121,1.20e-27,95;UBERON:0000924,1.20e-27,95;UBERON:0006601,1.20e-27,95;UBERON:0002346,1.75e-21,64;UBERON:0003075,1.75e-21,64;UBERON:0007284,1.75e-21,64;UBERON:0000073,2.24e-21,54;UBERON:0001049,3.95e-19,52;UBERON:0005068,3.95e-19,52;UBERON:0006241,3.95e-19,52;UBERON:0007135,3.95e-19,52;UBERON:0010371,1.39e-17,73;UBERON:0000955,6.40e-16,47;UBERON:0006238,6.40e-16,47;UBERON:0002020,1.01e-15,34;UBERON:0002021,1.28e-15,10;UBERON:0000411,1.28e-15,10;UBERON:0001950,1.28e-15,10;UBERON:0002616,6.96e-15,46;UBERON:0010314,9.69e-13,92;UBERON:0003528,1.04e-12,29;UBERON:0002791,1.04e-12,29;UBERON:0001893,1.04e-12,29;UBERON:0003080,9.81e-12,40;UBERON:0003056,1.21e-11,49;UBERON:0002780,9.70e-11,39;UBERON:0001890,9.70e-11,39;UBERON:0006240,9.70e-11,39;UBERON:0002619,4.37e-10,17;UBERON:0000956,2.76e-09,21;UBERON:0001869,2.76e-09,21;UBERON:0000203,2.76e-09,21;UBERON:0003076,7.87e-09,12;UBERON:0003057,7.87e-09,12;UBERON:0002410,2.07e-08,9;UBERON:0000010,2.64e-08,11;UBERON:0002950,4.50e-07,4;UBERON:0001891,4.50e-07,4;UBERON:0009616,4.50e-07,4;UBERON:0010286,4.50e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.00717454380462,0.304130793658544,1.46837401729345,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0.85960031981627,0,0.404632921719196,1.05798195854407,1.26766280701236,0.677689064138264,0,4.49949858640699,10.8775299882367,2.8419204597844,3.89480143673926,1.15265491596466,0.103689612308478,0,0.420649922702764,3.42781181284564,4.41737081903227,0.122490799214954,0.0958454710182364,0,19.82085857989,17.2377906415003,17.9719643909805,0.527545150920775,0.640413505216868,1.56274011167028,20.9387249251036,12.9435400307286,15.5854212732346,2.65165726926301,1.13897344639282,0.372798891650601,0.151452386666368,1.88928900266964,0,0,0,0,0,0,0.983110940922263,0.170430322578058,0,0.70667914902068,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,1.03909497345377,0,0,0,0.452167921657868,0.470354828542819,0.125666591329675,0,0.289198713839823,2.65383165584962,0,0.220841518460394,0.969750506270444,0,5.5628351432194,7.95897485891129,0.255457055208591,0,0,0,17.9748767285787,18.7575247155637,0.753926112677186,23.8139318663419,22.7586757023994,14.1295870300501,16.710850095979,0.203678727700633,0.622034853050465,0,3.57751155007006,0.130120442962704,0.459804208866946,0.540186389416048,0.452114453507145,1.08858398642125,0.2562274405697,0.562210347358373,3.88055056108524,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,37.2213208958505,0.308713837137853,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,2.71952841909355,0,0,25.0458920380955,21.8013737061498,0,10.0988370881749,2.2085575359138,3.12350995437311,2.36965737506079,2.62865677747807,0.222798674082394,1.41538265394416,4.04810701674894,4.9683495844923,5.53402889125133,13.1741739732941,1.13552068166615,0,0.325773918707152,0.824850614862677,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0.441056796109924,0.8244312647074,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,26.1449675834819,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0.167884616364078,0.579568782096571,0.375364950902364,1.09890974560359,2.57242054894879,0,7.34177395402186,10.1271552031579,9.73922372846974,8.59265911718438,17.8121455140367,24.9279986138601,22.9507650078814,23.8670237708837,23.5634052671786,27.9590568345983,0.207574695168353,0,0,0.243106717068294,0.209613162627982,0.919217542250071,0.44449345560323,0.412070114477788,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0.644613162144895,0.382576664137687,0.441182838239031,0.695603506861264|short_description=p2@Cpeb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12877 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000153419_5end | |||
|cluster_id=chr7:88517306..88517344,- | |||
|description=CAGE_peak_2_at_Cpeb1_5end | |||
|id=chr7:88517306..88517344,- | |||
|ontology_enrichment_celltype=CL:0000393!1.15e-11!39;CL:0000211!1.15e-11!39;CL:0000540!1.50e-11!33;CL:0000047!1.50e-11!33;CL:0000031!1.50e-11!33;CL:0000404!1.50e-11!33;CL:0000221!1.95e-11!44;CL:0000133!1.95e-11!44;CL:0002319!2.04e-11!43;CL:0000055!3.40e-11!50;CL:0000117!5.06e-08!23;CL:0000337!5.06e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.51e-13,33;CL:0000047,1.51e-13,33;CL:0000031,1.51e-13,33;CL:0000404,1.51e-13,33;CL:0000393,6.20e-13,39;CL:0000211,6.20e-13,39;CL:0002319,1.70e-12,43;CL:0000221,4.57e-12,44;CL:0000133,4.57e-12,44;CL:0000107,2.07e-08,9;CL:0000117,9.27e-08,23;CL:0000337,9.27e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.31e-26!102;UBERON:0000924!5.31e-26!102;UBERON:0006601!5.31e-26!102;UBERON:0000073!5.71e-24!75;UBERON:0001016!5.71e-24!75;UBERON:0001017!2.29e-23!73;UBERON:0005743!2.29e-23!73;UBERON:0002346!9.59e-19!71;UBERON:0003075!9.59e-19!71;UBERON:0007284!9.59e-19!71;UBERON:0000033!1.51e-17!63;UBERON:0002020!9.63e-15!34;UBERON:0001049!1.07e-14!52;UBERON:0005068!1.07e-14!52;UBERON:0006241!1.07e-14!52;UBERON:0007135!1.07e-14!52;UBERON:0000955!2.83e-14!50;UBERON:0006238!2.83e-14!50;UBERON:0002616!1.23e-13!49;UBERON:0003056!2.80e-13!49;UBERON:0002791!2.22e-12!29;UBERON:0003528!2.22e-12!29;UBERON:0001893!2.22e-12!29;UBERON:0003080!2.25e-10!40;UBERON:0002780!9.41e-10!39;UBERON:0001890!9.41e-10!39;UBERON:0006240!9.41e-10!39;UBERON:0002021!8.35e-09!10;UBERON:0000411!8.35e-09!10;UBERON:0001950!8.35e-09!10;UBERON:0002619!3.50e-08!17;UBERON:0000956!3.53e-08!21;UBERON:0001869!3.53e-08!21;UBERON:0000203!3.53e-08!21;UBERON:0007811!3.98e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.58e-33,75;UBERON:0001017,6.28e-33,73;UBERON:0004121,1.20e-27,95;UBERON:0000924,1.20e-27,95;UBERON:0006601,1.20e-27,95;UBERON:0002346,1.75e-21,64;UBERON:0003075,1.75e-21,64;UBERON:0007284,1.75e-21,64;UBERON:0000073,2.24e-21,54;UBERON:0001049,3.95e-19,52;UBERON:0005068,3.95e-19,52;UBERON:0006241,3.95e-19,52;UBERON:0007135,3.95e-19,52;UBERON:0010371,1.39e-17,73;UBERON:0000955,6.40e-16,47;UBERON:0006238,6.40e-16,47;UBERON:0002020,1.01e-15,34;UBERON:0002021,1.28e-15,10;UBERON:0000411,1.28e-15,10;UBERON:0001950,1.28e-15,10;UBERON:0002616,6.96e-15,46;UBERON:0010314,9.69e-13,92;UBERON:0003528,1.04e-12,29;UBERON:0002791,1.04e-12,29;UBERON:0001893,1.04e-12,29;UBERON:0003080,9.81e-12,40;UBERON:0003056,1.21e-11,49;UBERON:0002780,9.70e-11,39;UBERON:0001890,9.70e-11,39;UBERON:0006240,9.70e-11,39;UBERON:0002619,4.37e-10,17;UBERON:0000956,2.76e-09,21;UBERON:0001869,2.76e-09,21;UBERON:0000203,2.76e-09,21;UBERON:0003076,7.87e-09,12;UBERON:0003057,7.87e-09,12;UBERON:0002410,2.07e-08,9;UBERON:0000010,2.64e-08,11;UBERON:0002950,4.50e-07,4;UBERON:0001891,4.50e-07,4;UBERON:0009616,4.50e-07,4;UBERON:0010286,4.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.00717454380462,0.304130793658544,1.46837401729345,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0.85960031981627,0,0.404632921719196,1.05798195854407,1.26766280701236,0.677689064138264,0,4.49949858640699,10.8775299882367,2.8419204597844,3.89480143673926,1.15265491596466,0.103689612308478,0,0.420649922702764,3.42781181284564,4.41737081903227,0.122490799214954,0.0958454710182364,0,19.82085857989,17.2377906415003,17.9719643909805,0.527545150920775,0.640413505216868,1.56274011167028,20.9387249251036,12.9435400307286,15.5854212732346,2.65165726926301,1.13897344639282,0.372798891650601,0.151452386666368,1.88928900266964,0,0,0,0,0,0,0.983110940922263,0.170430322578058,0,0.70667914902068,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,1.03909497345377,0,0,0,0.452167921657868,0.470354828542819,0.125666591329675,0,0.289198713839823,2.65383165584962,0,0.220841518460394,0.969750506270444,0,5.5628351432194,7.95897485891129,0.255457055208591,0,0,0,17.9748767285787,18.7575247155637,0.753926112677186,23.8139318663419,22.7586757023994,14.1295870300501,16.710850095979,0.203678727700633,0.622034853050465,0,3.57751155007006,0.130120442962704,0.459804208866946,0.540186389416048,0.452114453507145,1.08858398642125,0.2562274405697,0.562210347358373,3.88055056108524,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,37.2213208958505,0.308713837137853,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,2.71952841909355,0,0,25.0458920380955,21.8013737061498,0,10.0988370881749,2.2085575359138,3.12350995437311,2.36965737506079,2.62865677747807,0.222798674082394,1.41538265394416,4.04810701674894,4.9683495844923,5.53402889125133,13.1741739732941,1.13552068166615,0,0.325773918707152,0.824850614862677,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0.441056796109924,0.8244312647074,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,26.1449675834819,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0.167884616364078,0.579568782096571,0.375364950902364,1.09890974560359,2.57242054894879,0,7.34177395402186,10.1271552031579,9.73922372846974,8.59265911718438,17.8121455140367,24.9279986138601,22.9507650078814,23.8670237708837,23.5634052671786,27.9590568345983,0.207574695168353,0,0,0.243106717068294,0.209613162627982,0.919217542250071,0.44449345560323,0.412070114477788,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0.644613162144895,0.382576664137687,0.441182838239031,0.695603506861264 | |||
|short_description=p2@Cpeb1 | |||
}} |
Latest revision as of 04:11, 27 September 2015
Short description: | p2@Cpeb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cpeb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000153419_5end |
EntrezGene: | Cpeb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.51e-13 | 33 |
neuronal stem cell | 1.51e-13 | 33 |
neuroblast | 1.51e-13 | 33 |
electrically signaling cell | 1.51e-13 | 33 |
electrically responsive cell | 6.20e-13 | 39 |
electrically active cell | 6.20e-13 | 39 |
neural cell | 1.70e-12 | 43 |
ectodermal cell | 4.57e-12 | 44 |
neurectodermal cell | 4.57e-12 | 44 |
autonomic neuron | 2.07e-08 | 9 |
CNS neuron (sensu Vertebrata) | 9.27e-08 | 23 |
neuroblast (sensu Vertebrata) | 9.27e-08 | 23 |