FFCP PHASE1:Mm9::chr9:42879451..42879465,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=459|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:42879451..42879465,-|id=chr9:42879451..42879465,-|ontology_enrichment_celltype=CL:0000117!2.77e-20!23;CL:0000337!2.77e-20!23;CL:0000540!7.63e-14!33;CL:0000047!7.63e-14!33;CL:0000031!7.63e-14!33;CL:0000404!7.63e-14!33;CL:0002609!5.11e-11!6;CL:0000393!7.15e-11!39;CL:0000211!7.15e-11!39;CL:0002319!2.28e-09!43;CL:0000221!4.89e-09!44;CL:0000133!4.89e-09!44;CL:0000055!2.41e-07!50|ontology_enrichment_celltype_v019_2=CL:0002609,1.14e-30,6;CL:0000117,6.93e-25,23;CL:0000337,6.93e-25,23;CL:0000540,3.73e-17,33;CL:0000047,3.73e-17,33;CL:0000031,3.73e-17,33;CL:0000404,3.73e-17,33;CL:0000393,2.07e-14,39;CL:0000211,2.07e-14,39;CL:0002319,5.30e-13,43;CL:0000221,1.09e-12,44;CL:0000133,1.09e-12,44;CL:0002612,9.09e-11,3;CL:0002608,1.14e-10,3;CL:0002321,1.12e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!6.81e-17!49;UBERON:0002346!3.74e-16!71;UBERON:0003075!3.74e-16!71;UBERON:0007284!3.74e-16!71;UBERON:0000033!6.13e-16!63;UBERON:0001049!1.02e-14!52;UBERON:0005068!1.02e-14!52;UBERON:0006241!1.02e-14!52;UBERON:0007135!1.02e-14!52;UBERON:0001017!3.52e-13!73;UBERON:0005743!3.52e-13!73;UBERON:0004121!9.82e-13!102;UBERON:0000924!9.82e-13!102;UBERON:0006601!9.82e-13!102;UBERON:0000073!1.34e-12!75;UBERON:0001016!1.34e-12!75;UBERON:0002020!1.73e-12!34;UBERON:0003080!1.73e-11!40;UBERON:0000955!3.23e-11!50;UBERON:0006238!3.23e-11!50;UBERON:0002780!1.56e-10!39;UBERON:0001890!1.56e-10!39;UBERON:0006240!1.56e-10!39;UBERON:0002616!1.91e-10!49;UBERON:0007811!1.96e-09!86;UBERON:0002240!2.39e-09!6;UBERON:0005174!2.39e-09!6;UBERON:0001137!2.39e-09!6;UBERON:0001948!1.64e-08!5;UBERON:0002315!1.64e-08!5;UBERON:0000153!5.86e-08!94;UBERON:0002791!1.61e-07!29;UBERON:0003528!1.61e-07!29;UBERON:0001893!1.61e-07!29;UBERON:0000970!5.86e-07!9;UBERON:0000019!5.86e-07!9;UBERON:0000047!5.86e-07!9;UBERON:0004088!5.86e-07!9;UBERON:0002104!5.86e-07!9;UBERON:0001456!5.86e-07!9;UBERON:0003072!5.86e-07!9;UBERON:0003071!5.86e-07!9;UBERON:0004128!5.86e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.95e-25,34;UBERON:0003528,8.15e-20,29;UBERON:0002791,8.15e-20,29;UBERON:0001893,8.15e-20,29;UBERON:0001049,3.12e-16,52;UBERON:0005068,3.12e-16,52;UBERON:0006241,3.12e-16,52;UBERON:0007135,3.12e-16,52;UBERON:0000073,1.34e-15,54;UBERON:0002780,1.47e-14,39;UBERON:0001890,1.47e-14,39;UBERON:0006240,1.47e-14,39;UBERON:0003080,3.53e-14,40;UBERON:0002346,5.08e-13,64;UBERON:0003075,5.08e-13,64;UBERON:0007284,5.08e-13,64;UBERON:0000956,1.65e-12,21;UBERON:0001869,1.65e-12,21;UBERON:0000203,1.65e-12,21;UBERON:0002616,3.11e-12,46;UBERON:0000955,5.88e-12,47;UBERON:0006238,5.88e-12,47;UBERON:0003056,1.94e-11,49;UBERON:0010371,2.68e-11,73;UBERON:0001017,2.68e-11,73;UBERON:0001016,5.69e-11,75;UBERON:0002257,9.09e-11,3;UBERON:0001954,4.03e-10,7;UBERON:0003022,4.03e-10,7;UBERON:0002421,4.03e-10,7;UBERON:0000349,4.03e-10,7;UBERON:0002600,4.03e-10,7;UBERON:0002420,9.16e-09,8;UBERON:0007245,9.16e-09,8;UBERON:0010009,9.16e-09,8;UBERON:0010011,9.16e-09,8;UBERON:0000454,9.16e-09,8;UBERON:0010314,9.32e-09,92;UBERON:0004121,1.90e-08,95;UBERON:0000924,1.90e-08,95;UBERON:0006601,1.90e-08,95;UBERON:0000025,7.40e-07,114;UBERON:0000369,8.29e-07,5;UBERON:0002435,8.29e-07,5;UBERON:0001948,8.29e-07,5;UBERON:0002315,8.29e-07,5;UBERON:0000204,8.29e-07,5;UBERON:0010082,8.29e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,0,0,1.24427534770173,2.56511282830212,1.26194976810829,0.285650984403804,0.662605622854841,1.34739879136449,1.15014565221884,0.919218786610021,0,0.255374676170375,0.46081959976873,0.527545150920775,0.640413505216868,1.04182674111352,0,1.12552522006336,0,1.17851434189467,0.711858403995515,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,4.90051973240171,0,0,0.62336413367868,0.324482526135515,0,0,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.476255494059295,0.768682321709099,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26390147234426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.838452650511929,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0,0.280924522409647,0.128050304809739,0.114870937911227,0,0.463537303779422,0,0,0.294397840268795,0.342869252385415,0,0.476872379894642,0.581385666529314,0.470546902076653,0.423073039458382,0,0,0.271608227691724,0,0.593175090620871,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,1.24905288968973,0.233931608445408,0,0,0,0|short_description=p@chr9:42879451..42879465,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=459 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:42879451..42879465,- | |||
|description=CAGE_peak_at_chr9:42879451..42879465,- | |||
|id=chr9:42879451..42879465,- | |||
|ontology_enrichment_celltype=CL:0000117!2.77e-20!23;CL:0000337!2.77e-20!23;CL:0000540!7.63e-14!33;CL:0000047!7.63e-14!33;CL:0000031!7.63e-14!33;CL:0000404!7.63e-14!33;CL:0002609!5.11e-11!6;CL:0000393!7.15e-11!39;CL:0000211!7.15e-11!39;CL:0002319!2.28e-09!43;CL:0000221!4.89e-09!44;CL:0000133!4.89e-09!44;CL:0000055!2.41e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.14e-30,6;CL:0000117,6.93e-25,23;CL:0000337,6.93e-25,23;CL:0000540,3.73e-17,33;CL:0000047,3.73e-17,33;CL:0000031,3.73e-17,33;CL:0000404,3.73e-17,33;CL:0000393,2.07e-14,39;CL:0000211,2.07e-14,39;CL:0002319,5.30e-13,43;CL:0000221,1.09e-12,44;CL:0000133,1.09e-12,44;CL:0002612,9.09e-11,3;CL:0002608,1.14e-10,3;CL:0002321,1.12e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!6.81e-17!49;UBERON:0002346!3.74e-16!71;UBERON:0003075!3.74e-16!71;UBERON:0007284!3.74e-16!71;UBERON:0000033!6.13e-16!63;UBERON:0001049!1.02e-14!52;UBERON:0005068!1.02e-14!52;UBERON:0006241!1.02e-14!52;UBERON:0007135!1.02e-14!52;UBERON:0001017!3.52e-13!73;UBERON:0005743!3.52e-13!73;UBERON:0004121!9.82e-13!102;UBERON:0000924!9.82e-13!102;UBERON:0006601!9.82e-13!102;UBERON:0000073!1.34e-12!75;UBERON:0001016!1.34e-12!75;UBERON:0002020!1.73e-12!34;UBERON:0003080!1.73e-11!40;UBERON:0000955!3.23e-11!50;UBERON:0006238!3.23e-11!50;UBERON:0002780!1.56e-10!39;UBERON:0001890!1.56e-10!39;UBERON:0006240!1.56e-10!39;UBERON:0002616!1.91e-10!49;UBERON:0007811!1.96e-09!86;UBERON:0002240!2.39e-09!6;UBERON:0005174!2.39e-09!6;UBERON:0001137!2.39e-09!6;UBERON:0001948!1.64e-08!5;UBERON:0002315!1.64e-08!5;UBERON:0000153!5.86e-08!94;UBERON:0002791!1.61e-07!29;UBERON:0003528!1.61e-07!29;UBERON:0001893!1.61e-07!29;UBERON:0000970!5.86e-07!9;UBERON:0000019!5.86e-07!9;UBERON:0000047!5.86e-07!9;UBERON:0004088!5.86e-07!9;UBERON:0002104!5.86e-07!9;UBERON:0001456!5.86e-07!9;UBERON:0003072!5.86e-07!9;UBERON:0003071!5.86e-07!9;UBERON:0004128!5.86e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.95e-25,34;UBERON:0003528,8.15e-20,29;UBERON:0002791,8.15e-20,29;UBERON:0001893,8.15e-20,29;UBERON:0001049,3.12e-16,52;UBERON:0005068,3.12e-16,52;UBERON:0006241,3.12e-16,52;UBERON:0007135,3.12e-16,52;UBERON:0000073,1.34e-15,54;UBERON:0002780,1.47e-14,39;UBERON:0001890,1.47e-14,39;UBERON:0006240,1.47e-14,39;UBERON:0003080,3.53e-14,40;UBERON:0002346,5.08e-13,64;UBERON:0003075,5.08e-13,64;UBERON:0007284,5.08e-13,64;UBERON:0000956,1.65e-12,21;UBERON:0001869,1.65e-12,21;UBERON:0000203,1.65e-12,21;UBERON:0002616,3.11e-12,46;UBERON:0000955,5.88e-12,47;UBERON:0006238,5.88e-12,47;UBERON:0003056,1.94e-11,49;UBERON:0010371,2.68e-11,73;UBERON:0001017,2.68e-11,73;UBERON:0001016,5.69e-11,75;UBERON:0002257,9.09e-11,3;UBERON:0001954,4.03e-10,7;UBERON:0003022,4.03e-10,7;UBERON:0002421,4.03e-10,7;UBERON:0000349,4.03e-10,7;UBERON:0002600,4.03e-10,7;UBERON:0002420,9.16e-09,8;UBERON:0007245,9.16e-09,8;UBERON:0010009,9.16e-09,8;UBERON:0010011,9.16e-09,8;UBERON:0000454,9.16e-09,8;UBERON:0010314,9.32e-09,92;UBERON:0004121,1.90e-08,95;UBERON:0000924,1.90e-08,95;UBERON:0006601,1.90e-08,95;UBERON:0000025,7.40e-07,114;UBERON:0000369,8.29e-07,5;UBERON:0002435,8.29e-07,5;UBERON:0001948,8.29e-07,5;UBERON:0002315,8.29e-07,5;UBERON:0000204,8.29e-07,5;UBERON:0010082,8.29e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,0,0,1.24427534770173,2.56511282830212,1.26194976810829,0.285650984403804,0.662605622854841,1.34739879136449,1.15014565221884,0.919218786610021,0,0.255374676170375,0.46081959976873,0.527545150920775,0.640413505216868,1.04182674111352,0,1.12552522006336,0,1.17851434189467,0.711858403995515,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,4.90051973240171,0,0,0.62336413367868,0.324482526135515,0,0,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.476255494059295,0.768682321709099,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26390147234426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.838452650511929,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0,0.280924522409647,0.128050304809739,0.114870937911227,0,0.463537303779422,0,0,0.294397840268795,0.342869252385415,0,0.476872379894642,0.581385666529314,0.470546902076653,0.423073039458382,0,0,0.271608227691724,0,0.593175090620871,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,1.24905288968973,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr9:42879451..42879465,- | |||
}} |
Latest revision as of 03:07, 5 August 2015
Short description: | p@chr9:42879451..42879465, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:42879451..42879465, - |
Coexpression cluster: | MCL_coexpression_mm9:459 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.14e-30 | 6 |
CNS neuron (sensu Vertebrata) | 6.93e-25 | 23 |
neuroblast (sensu Vertebrata) | 6.93e-25 | 23 |
neuron | 3.73e-17 | 33 |
neuronal stem cell | 3.73e-17 | 33 |
neuroblast | 3.73e-17 | 33 |
electrically signaling cell | 3.73e-17 | 33 |
electrically responsive cell | 2.07e-14 | 39 |
electrically active cell | 2.07e-14 | 39 |
neural cell | 5.30e-13 | 43 |
ectodermal cell | 1.09e-12 | 44 |
neurectodermal cell | 1.09e-12 | 44 |
neuron of the ventral spinal cord | 9.09e-11 | 3 |
hippocampal neuron | 1.14e-10 | 3 |
embryonic cell | 1.12e-07 | 70 |