FFCP PHASE1:Mm9::chrX:156065014..156065035,+: Difference between revisions
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{{FFCP|EntrezGene=58194|HGNC=|MCL_coexpression_id=1276|UniProt=Q8R550|association_with_transcript=-168bp_to_ENSMUST00000112456_5end|description=CAGE_peak_25_at_Sh3kbp1_5end|id=chrX:156065014..156065035,+|ontology_enrichment_celltype=CL:0000117!4.92e-13!23;CL:0000337!4.92e-13!23;CL:0000540!5.50e-08!33;CL:0000047!5.50e-08!33;CL:0000031!5.50e-08!33;CL:0000404!5.50e-08!33;CL:0000393!4.34e-07!39;CL:0000211!4.34e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-19,23;CL:0000337,1.59e-19,23;CL:0002609,7.43e-13,6;CL:0000540,8.21e-13,33;CL:0000047,8.21e-13,33;CL:0000031,8.21e-13,33;CL:0000404,8.21e-13,33;CL:0000393,1.93e-10,39;CL:0000211,1.93e-10,39;CL:0002612,1.38e-09,3;CL:0002319,3.14e-09,43;CL:0000221,5.83e-09,44;CL:0000133,5.83e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.13e-16!86;UBERON:0002020!3.05e-16!34;UBERON:0000153!3.69e-15!94;UBERON:0002791!1.13e-12!29;UBERON:0003528!1.13e-12!29;UBERON:0001893!1.13e-12!29;UBERON:0001049!1.22e-11!52;UBERON:0005068!1.22e-11!52;UBERON:0006241!1.22e-11!52;UBERON:0007135!1.22e-11!52;UBERON:0003056!1.53e-11!49;UBERON:0003080!5.66e-11!40;UBERON:0002780!6.38e-11!39;UBERON:0001890!6.38e-11!39;UBERON:0006240!6.38e-11!39;UBERON:0000033!6.94e-10!63;UBERON:0000955!2.00e-09!50;UBERON:0006238!2.00e-09!50;UBERON:0000073!3.80e-09!75;UBERON:0001016!3.80e-09!75;UBERON:0002616!3.81e-09!49;UBERON:0001017!4.67e-09!73;UBERON:0005743!4.67e-09!73;UBERON:0002346!8.01e-09!71;UBERON:0003075!8.01e-09!71;UBERON:0007284!8.01e-09!71;UBERON:0000956!2.43e-08!21;UBERON:0001869!2.43e-08!21;UBERON:0000203!2.43e-08!21;UBERON:0004121!1.04e-07!102;UBERON:0000924!1.04e-07!102;UBERON:0006601!1.04e-07!102;UBERON:0003408!1.14e-07!24;UBERON:0002370!3.22e-07!23;UBERON:0000974!3.22e-07!23;UBERON:0004807!3.22e-07!23;UBERON:0005058!3.22e-07!23;UBERON:0003351!3.22e-07!23;UBERON:0009113!3.22e-07!23;UBERON:0003295!3.22e-07!23;UBERON:0009722!3.22e-07!23;UBERON:0005562!3.22e-07!23;UBERON:0007690!3.22e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.37e-25,34;UBERON:0003528,4.06e-15,29;UBERON:0002791,4.06e-15,29;UBERON:0001893,4.06e-15,29;UBERON:0001049,6.02e-15,52;UBERON:0005068,6.02e-15,52;UBERON:0006241,6.02e-15,52;UBERON:0007135,6.02e-15,52;UBERON:0001948,2.47e-14,5;UBERON:0002315,2.47e-14,5;UBERON:0002370,2.57e-14,23;UBERON:0000974,2.57e-14,23;UBERON:0004807,2.57e-14,23;UBERON:0005058,2.57e-14,23;UBERON:0003351,2.57e-14,23;UBERON:0009113,2.57e-14,23;UBERON:0003295,2.57e-14,23;UBERON:0009722,2.57e-14,23;UBERON:0005562,2.57e-14,23;UBERON:0007690,2.57e-14,23;UBERON:0000073,2.97e-14,54;UBERON:0006562,1.25e-13,24;UBERON:0003408,1.25e-13,24;UBERON:0001557,1.25e-13,24;UBERON:0001042,1.25e-13,24;UBERON:0008814,1.25e-13,24;UBERON:0009145,1.25e-13,24;UBERON:0000956,1.46e-12,21;UBERON:0001869,1.46e-12,21;UBERON:0000203,1.46e-12,21;UBERON:0002240,6.56e-12,6;UBERON:0005174,6.56e-12,6;UBERON:0001137,6.56e-12,6;UBERON:0000072,7.07e-12,27;UBERON:0002346,1.94e-11,64;UBERON:0003075,1.94e-11,64;UBERON:0007284,1.94e-11,64;UBERON:0004177,6.55e-11,29;UBERON:0005057,6.55e-11,29;UBERON:0001017,6.69e-11,73;UBERON:0002780,1.44e-10,39;UBERON:0001890,1.44e-10,39;UBERON:0006240,1.44e-10,39;UBERON:0001016,1.66e-10,75;UBERON:0003080,3.08e-10,40;UBERON:0002257,1.38e-09,3;UBERON:0000483,1.41e-09,174;UBERON:0010371,1.44e-09,73;UBERON:0000119,2.09e-09,176;UBERON:0011216,5.93e-09,194;UBERON:0000077,1.12e-08,35;UBERON:0002616,1.45e-08,46;UBERON:0007811,2.23e-08,36;UBERON:0000955,2.50e-08,47;UBERON:0006238,2.50e-08,47;UBERON:0003056,6.97e-08,49;UBERON:0002619,8.32e-08,17;UBERON:0004121,1.81e-07,95;UBERON:0000924,1.81e-07,95;UBERON:0006601,1.81e-07,95;UBERON:0000065,4.21e-07,41;UBERON:0001004,6.95e-07,42;UBERON:0010314,7.83e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0.239316476986009,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0.809265843438391,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,2.17748185847803,2.02508907497536,1.47227472945967,1.42825492201902,1.10434270475807,2.44981598429908,0.575072826109418,2.75765635983006,0,0.383062014255563,0.153606533256243,1.84640802822271,0.823388792421687,2.08365348222704,0.279182999001381,0.56276261003168,0.30559649555362,3.53554302568401,1.56608848879013,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0.915001205637253,2.76439574648302,0.695297280769106,0.511430914660661,0.20778804455956,0.811206315338788,0.203678727700633,0,0,0,0,0.229902104433473,0.360124259610698,0.753524089178575,0.612328492361951,0.384341160854549,0.468508622798644,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0,0.7022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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58194 | |||
|HGNC= | |||
|MCL_coexpression_id=1276 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R550 | |||
|association_with_transcript=-168bp_to_ENSMUST00000112456_5end | |||
|cluster_id=chrX:156065014..156065035,+ | |||
|description=CAGE_peak_25_at_Sh3kbp1_5end | |||
|id=chrX:156065014..156065035,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.92e-13!23;CL:0000337!4.92e-13!23;CL:0000540!5.50e-08!33;CL:0000047!5.50e-08!33;CL:0000031!5.50e-08!33;CL:0000404!5.50e-08!33;CL:0000393!4.34e-07!39;CL:0000211!4.34e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-19,23;CL:0000337,1.59e-19,23;CL:0002609,7.43e-13,6;CL:0000540,8.21e-13,33;CL:0000047,8.21e-13,33;CL:0000031,8.21e-13,33;CL:0000404,8.21e-13,33;CL:0000393,1.93e-10,39;CL:0000211,1.93e-10,39;CL:0002612,1.38e-09,3;CL:0002319,3.14e-09,43;CL:0000221,5.83e-09,44;CL:0000133,5.83e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.13e-16!86;UBERON:0002020!3.05e-16!34;UBERON:0000153!3.69e-15!94;UBERON:0002791!1.13e-12!29;UBERON:0003528!1.13e-12!29;UBERON:0001893!1.13e-12!29;UBERON:0001049!1.22e-11!52;UBERON:0005068!1.22e-11!52;UBERON:0006241!1.22e-11!52;UBERON:0007135!1.22e-11!52;UBERON:0003056!1.53e-11!49;UBERON:0003080!5.66e-11!40;UBERON:0002780!6.38e-11!39;UBERON:0001890!6.38e-11!39;UBERON:0006240!6.38e-11!39;UBERON:0000033!6.94e-10!63;UBERON:0000955!2.00e-09!50;UBERON:0006238!2.00e-09!50;UBERON:0000073!3.80e-09!75;UBERON:0001016!3.80e-09!75;UBERON:0002616!3.81e-09!49;UBERON:0001017!4.67e-09!73;UBERON:0005743!4.67e-09!73;UBERON:0002346!8.01e-09!71;UBERON:0003075!8.01e-09!71;UBERON:0007284!8.01e-09!71;UBERON:0000956!2.43e-08!21;UBERON:0001869!2.43e-08!21;UBERON:0000203!2.43e-08!21;UBERON:0004121!1.04e-07!102;UBERON:0000924!1.04e-07!102;UBERON:0006601!1.04e-07!102;UBERON:0003408!1.14e-07!24;UBERON:0002370!3.22e-07!23;UBERON:0000974!3.22e-07!23;UBERON:0004807!3.22e-07!23;UBERON:0005058!3.22e-07!23;UBERON:0003351!3.22e-07!23;UBERON:0009113!3.22e-07!23;UBERON:0003295!3.22e-07!23;UBERON:0009722!3.22e-07!23;UBERON:0005562!3.22e-07!23;UBERON:0007690!3.22e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.37e-25,34;UBERON:0003528,4.06e-15,29;UBERON:0002791,4.06e-15,29;UBERON:0001893,4.06e-15,29;UBERON:0001049,6.02e-15,52;UBERON:0005068,6.02e-15,52;UBERON:0006241,6.02e-15,52;UBERON:0007135,6.02e-15,52;UBERON:0001948,2.47e-14,5;UBERON:0002315,2.47e-14,5;UBERON:0002370,2.57e-14,23;UBERON:0000974,2.57e-14,23;UBERON:0004807,2.57e-14,23;UBERON:0005058,2.57e-14,23;UBERON:0003351,2.57e-14,23;UBERON:0009113,2.57e-14,23;UBERON:0003295,2.57e-14,23;UBERON:0009722,2.57e-14,23;UBERON:0005562,2.57e-14,23;UBERON:0007690,2.57e-14,23;UBERON:0000073,2.97e-14,54;UBERON:0006562,1.25e-13,24;UBERON:0003408,1.25e-13,24;UBERON:0001557,1.25e-13,24;UBERON:0001042,1.25e-13,24;UBERON:0008814,1.25e-13,24;UBERON:0009145,1.25e-13,24;UBERON:0000956,1.46e-12,21;UBERON:0001869,1.46e-12,21;UBERON:0000203,1.46e-12,21;UBERON:0002240,6.56e-12,6;UBERON:0005174,6.56e-12,6;UBERON:0001137,6.56e-12,6;UBERON:0000072,7.07e-12,27;UBERON:0002346,1.94e-11,64;UBERON:0003075,1.94e-11,64;UBERON:0007284,1.94e-11,64;UBERON:0004177,6.55e-11,29;UBERON:0005057,6.55e-11,29;UBERON:0001017,6.69e-11,73;UBERON:0002780,1.44e-10,39;UBERON:0001890,1.44e-10,39;UBERON:0006240,1.44e-10,39;UBERON:0001016,1.66e-10,75;UBERON:0003080,3.08e-10,40;UBERON:0002257,1.38e-09,3;UBERON:0000483,1.41e-09,174;UBERON:0010371,1.44e-09,73;UBERON:0000119,2.09e-09,176;UBERON:0011216,5.93e-09,194;UBERON:0000077,1.12e-08,35;UBERON:0002616,1.45e-08,46;UBERON:0007811,2.23e-08,36;UBERON:0000955,2.50e-08,47;UBERON:0006238,2.50e-08,47;UBERON:0003056,6.97e-08,49;UBERON:0002619,8.32e-08,17;UBERON:0004121,1.81e-07,95;UBERON:0000924,1.81e-07,95;UBERON:0006601,1.81e-07,95;UBERON:0000065,4.21e-07,41;UBERON:0001004,6.95e-07,42;UBERON:0010314,7.83e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0.239316476986009,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0.809265843438391,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,2.17748185847803,2.02508907497536,1.47227472945967,1.42825492201902,1.10434270475807,2.44981598429908,0.575072826109418,2.75765635983006,0,0.383062014255563,0.153606533256243,1.84640802822271,0.823388792421687,2.08365348222704,0.279182999001381,0.56276261003168,0.30559649555362,3.53554302568401,1.56608848879013,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0.915001205637253,2.76439574648302,0.695297280769106,0.511430914660661,0.20778804455956,0.811206315338788,0.203678727700633,0,0,0,0,0.229902104433473,0.360124259610698,0.753524089178575,0.612328492361951,0.384341160854549,0.468508622798644,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0,0.702213187313235,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0.420579897128254,4.21908910755066,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0.420814919341911,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0.584511715822624,0,0.321321316421807,0.141940085208269,0.534196811001766,0.651547837414304,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0,0.645857706783622,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.419854356970974,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0.621339313086926,0,0,0.330916980914195,0,0,0,0.821500670520278,0.2604087696879,0.524296722128554,0,0.288030006257865,2.52808896502543,0.608175645870493,0.616265742988964,1.16928740680016,0.895133478337407,1.58945083825012,2.40390899039938,1.32920574457119,2.82706059854813,4.34378797933499,2.62148081355785,2.24153125701431,1.44317762460494,2.45441494581295,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,1.14579102687879,0.515559547031063,0,0.755393897389701,0,1.35096360967266,0.453142408984205,1.55328093525546,0,0.798049746802062,0.682934423016537,0.486213434136588,0,0,0,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.754505365544305,0.187283014939765,0.512201219238954,0.34461281373368,0,0,0.192909220463705,0,0,0.685738504770831,0.354951612318675,0,0.436039249896986,0.0941093804153306,0.338458431566706,0.914639864363863,0.263069711437843,0.271608227691724,0,0.711810108745045,0.197008964751127,0.818462086339379,0.309873682371932,0.385813221962283,0,0,0.644613162144895,0,0,0 | |||
|short_description=p25@Sh3kbp1 | |||
}} |
Latest revision as of 17:30, 1 October 2015
Short description: | p25@Sh3kbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_Sh3kbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1276 |
Association with transcript: | -168bp_to_ENSMUST00000112456_5end |
EntrezGene: | Sh3kbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.59e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-19 | 23 |
neuron of cerebral cortex | 7.43e-13 | 6 |
neuron | 8.21e-13 | 33 |
neuronal stem cell | 8.21e-13 | 33 |
neuroblast | 8.21e-13 | 33 |
electrically signaling cell | 8.21e-13 | 33 |
electrically responsive cell | 1.93e-10 | 39 |
electrically active cell | 1.93e-10 | 39 |
neuron of the ventral spinal cord | 1.38e-09 | 3 |
neural cell | 3.14e-09 | 43 |
ectodermal cell | 5.83e-09 | 44 |
neurectodermal cell | 5.83e-09 | 44 |