FFCP PHASE1:Mm9::chrX:162676716..162676727,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14758|HGNC=|MCL_coexpression_id=1780|UniProt=P35803|association_with_transcript=-115bp_to_ENSMUST00000112235_5end|description=CAGE_peak_12_at_Gpm6b_5end|id=chrX:162676716..162676727,+|ontology_enrichment_celltype=CL:0000117!3.70e-12!23;CL:0000337!3.70e-12!23;CL:0000393!3.91e-09!39;CL:0000211!3.91e-09!39;CL:0000540!2.39e-08!33;CL:0000047!2.39e-08!33;CL:0000031!2.39e-08!33;CL:0000404!2.39e-08!33;CL:0000055!6.89e-08!50;CL:0000221!1.17e-07!44;CL:0000133!1.17e-07!44;CL:0002319!2.25e-07!43;CL:0002609!4.18e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,9.61e-17,6;CL:0000117,1.28e-12,23;CL:0000337,1.28e-12,23;CL:0002608,3.19e-09,3;CL:0002612,3.19e-09,3;CL:0000540,1.24e-08,33;CL:0000047,1.24e-08,33;CL:0000031,1.24e-08,33;CL:0000404,1.24e-08,33;CL:0000393,3.24e-07,39;CL:0000211,3.24e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.29e-19!34;UBERON:0002791!9.76e-15!29;UBERON:0003528!9.76e-15!29;UBERON:0001893!9.76e-15!29;UBERON:0000956!1.47e-13!21;UBERON:0001869!1.47e-13!21;UBERON:0000203!1.47e-13!21;UBERON:0002346!2.30e-13!71;UBERON:0003075!2.30e-13!71;UBERON:0007284!2.30e-13!71;UBERON:0001049!2.78e-13!52;UBERON:0005068!2.78e-13!52;UBERON:0006241!2.78e-13!52;UBERON:0007135!2.78e-13!52;UBERON:0001017!7.36e-13!73;UBERON:0005743!7.36e-13!73;UBERON:0000073!9.47e-13!75;UBERON:0001016!9.47e-13!75;UBERON:0000033!7.83e-12!63;UBERON:0003056!8.19e-12!49;UBERON:0004121!9.60e-12!102;UBERON:0000924!9.60e-12!102;UBERON:0006601!9.60e-12!102;UBERON:0002780!9.71e-11!39;UBERON:0001890!9.71e-11!39;UBERON:0006240!9.71e-11!39;UBERON:0002619!1.44e-10!17;UBERON:0002616!1.81e-10!49;UBERON:0003080!3.00e-10!40;UBERON:0000955!4.65e-10!50;UBERON:0006238!4.65e-10!50|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.94e-35,34;UBERON:0000956,4.02e-29,21;UBERON:0001869,4.02e-29,21;UBERON:0000203,4.02e-29,21;UBERON:0003528,2.21e-25,29;UBERON:0002791,2.21e-25,29;UBERON:0001893,2.21e-25,29;UBERON:0002619,2.36e-23,17;UBERON:0001049,1.75e-22,52;UBERON:0005068,1.75e-22,52;UBERON:0006241,1.75e-22,52;UBERON:0007135,1.75e-22,52;UBERON:0000073,1.33e-21,54;UBERON:0002780,1.37e-18,39;UBERON:0001890,1.37e-18,39;UBERON:0006240,1.37e-18,39;UBERON:0003080,4.28e-18,40;UBERON:0002346,5.05e-18,64;UBERON:0003075,5.05e-18,64;UBERON:0007284,5.05e-18,64;UBERON:0002021,4.85e-16,10;UBERON:0000411,4.85e-16,10;UBERON:0001950,4.85e-16,10;UBERON:0010371,1.24e-15,73;UBERON:0001017,1.24e-15,73;UBERON:0002616,1.39e-15,46;UBERON:0000955,3.17e-15,47;UBERON:0006238,3.17e-15,47;UBERON:0001016,3.51e-15,75;UBERON:0003056,1.49e-14,49;UBERON:0010314,4.10e-12,92;UBERON:0001948,1.09e-11,5;UBERON:0002315,1.09e-11,5;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0002240,7.79e-10,6;UBERON:0005174,7.79e-10,6;UBERON:0001137,7.79e-10,6;UBERON:0000025,1.73e-09,114;UBERON:0002257,3.19e-09,3;UBERON:0001954,8.52e-09,7;UBERON:0003022,8.52e-09,7;UBERON:0002421,8.52e-09,7;UBERON:0000349,8.52e-09,7;UBERON:0002600,8.52e-09,7;UBERON:0004111,9.13e-09,122|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,1.03689612308478,0.540023753326763,1.68259969081106,0.285650984403804,1.10434270475807,1.10241719293459,0.766763768145891,1.83843757322004,0,0.127687338085188,0.153606533256243,0.659431438650969,0.365950574409639,0,0,0,0.30559649555362,0.589257170947335,1.13897344639282,1.3047961207771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.867426633830679,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0.457500602818626,3.39266750704734,0.173824320192276,0.511430914660661,0,0,0,0,0,0,0,0.689706313300419,0.360124259610698,0,0.544291993210623,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.703804496655795,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,5.35103984372279,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,4.01026859407578,2.92150409984269,0,0.755393897389701,0,1.35096360967266,0.453142408984205,0.51776031175182,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.38581844092741,0.824171801606613,0.588795680537589,0,0.177475806159338,0.238436189947321,0.581385666529314,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0.818462086339379,0.464810523557898,0,0.249810577937946,0.701794825336225,0.214871054048298,0,0,0|short_description=p12@Gpm6b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14758 | |||
|HGNC= | |||
|MCL_coexpression_id=1780 | |||
|TSSclassifier=NA | |||
|UniProt=P35803 | |||
|association_with_transcript=-115bp_to_ENSMUST00000112235_5end | |||
|cluster_id=chrX:162676716..162676727,+ | |||
|description=CAGE_peak_12_at_Gpm6b_5end | |||
|id=chrX:162676716..162676727,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.70e-12!23;CL:0000337!3.70e-12!23;CL:0000393!3.91e-09!39;CL:0000211!3.91e-09!39;CL:0000540!2.39e-08!33;CL:0000047!2.39e-08!33;CL:0000031!2.39e-08!33;CL:0000404!2.39e-08!33;CL:0000055!6.89e-08!50;CL:0000221!1.17e-07!44;CL:0000133!1.17e-07!44;CL:0002319!2.25e-07!43;CL:0002609!4.18e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,9.61e-17,6;CL:0000117,1.28e-12,23;CL:0000337,1.28e-12,23;CL:0002608,3.19e-09,3;CL:0002612,3.19e-09,3;CL:0000540,1.24e-08,33;CL:0000047,1.24e-08,33;CL:0000031,1.24e-08,33;CL:0000404,1.24e-08,33;CL:0000393,3.24e-07,39;CL:0000211,3.24e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.29e-19!34;UBERON:0002791!9.76e-15!29;UBERON:0003528!9.76e-15!29;UBERON:0001893!9.76e-15!29;UBERON:0000956!1.47e-13!21;UBERON:0001869!1.47e-13!21;UBERON:0000203!1.47e-13!21;UBERON:0002346!2.30e-13!71;UBERON:0003075!2.30e-13!71;UBERON:0007284!2.30e-13!71;UBERON:0001049!2.78e-13!52;UBERON:0005068!2.78e-13!52;UBERON:0006241!2.78e-13!52;UBERON:0007135!2.78e-13!52;UBERON:0001017!7.36e-13!73;UBERON:0005743!7.36e-13!73;UBERON:0000073!9.47e-13!75;UBERON:0001016!9.47e-13!75;UBERON:0000033!7.83e-12!63;UBERON:0003056!8.19e-12!49;UBERON:0004121!9.60e-12!102;UBERON:0000924!9.60e-12!102;UBERON:0006601!9.60e-12!102;UBERON:0002780!9.71e-11!39;UBERON:0001890!9.71e-11!39;UBERON:0006240!9.71e-11!39;UBERON:0002619!1.44e-10!17;UBERON:0002616!1.81e-10!49;UBERON:0003080!3.00e-10!40;UBERON:0000955!4.65e-10!50;UBERON:0006238!4.65e-10!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.94e-35,34;UBERON:0000956,4.02e-29,21;UBERON:0001869,4.02e-29,21;UBERON:0000203,4.02e-29,21;UBERON:0003528,2.21e-25,29;UBERON:0002791,2.21e-25,29;UBERON:0001893,2.21e-25,29;UBERON:0002619,2.36e-23,17;UBERON:0001049,1.75e-22,52;UBERON:0005068,1.75e-22,52;UBERON:0006241,1.75e-22,52;UBERON:0007135,1.75e-22,52;UBERON:0000073,1.33e-21,54;UBERON:0002780,1.37e-18,39;UBERON:0001890,1.37e-18,39;UBERON:0006240,1.37e-18,39;UBERON:0003080,4.28e-18,40;UBERON:0002346,5.05e-18,64;UBERON:0003075,5.05e-18,64;UBERON:0007284,5.05e-18,64;UBERON:0002021,4.85e-16,10;UBERON:0000411,4.85e-16,10;UBERON:0001950,4.85e-16,10;UBERON:0010371,1.24e-15,73;UBERON:0001017,1.24e-15,73;UBERON:0002616,1.39e-15,46;UBERON:0000955,3.17e-15,47;UBERON:0006238,3.17e-15,47;UBERON:0001016,3.51e-15,75;UBERON:0003056,1.49e-14,49;UBERON:0010314,4.10e-12,92;UBERON:0001948,1.09e-11,5;UBERON:0002315,1.09e-11,5;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0002240,7.79e-10,6;UBERON:0005174,7.79e-10,6;UBERON:0001137,7.79e-10,6;UBERON:0000025,1.73e-09,114;UBERON:0002257,3.19e-09,3;UBERON:0001954,8.52e-09,7;UBERON:0003022,8.52e-09,7;UBERON:0002421,8.52e-09,7;UBERON:0000349,8.52e-09,7;UBERON:0002600,8.52e-09,7;UBERON:0004111,9.13e-09,122 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,1.03689612308478,0.540023753326763,1.68259969081106,0.285650984403804,1.10434270475807,1.10241719293459,0.766763768145891,1.83843757322004,0,0.127687338085188,0.153606533256243,0.659431438650969,0.365950574409639,0,0,0,0.30559649555362,0.589257170947335,1.13897344639282,1.3047961207771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.867426633830679,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0.457500602818626,3.39266750704734,0.173824320192276,0.511430914660661,0,0,0,0,0,0,0,0.689706313300419,0.360124259610698,0,0.544291993210623,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.703804496655795,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,5.35103984372279,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,4.01026859407578,2.92150409984269,0,0.755393897389701,0,1.35096360967266,0.453142408984205,0.51776031175182,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.38581844092741,0.824171801606613,0.588795680537589,0,0.177475806159338,0.238436189947321,0.581385666529314,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0.818462086339379,0.464810523557898,0,0.249810577937946,0.701794825336225,0.214871054048298,0,0,0 | |||
|short_description=p12@Gpm6b | |||
}} |
Latest revision as of 18:26, 1 October 2015
Short description: | p12@Gpm6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Gpm6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1780 |
Association with transcript: | -115bp_to_ENSMUST00000112235_5end |
EntrezGene: | Gpm6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 9.61e-17 | 6 |
CNS neuron (sensu Vertebrata) | 1.28e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-12 | 23 |
hippocampal neuron | 3.19e-09 | 3 |
neuron of the ventral spinal cord | 3.19e-09 | 3 |
neuron | 1.24e-08 | 33 |
neuronal stem cell | 1.24e-08 | 33 |
neuroblast | 1.24e-08 | 33 |
electrically signaling cell | 1.24e-08 | 33 |
electrically responsive cell | 3.24e-07 | 39 |
electrically active cell | 3.24e-07 | 39 |