FFCP PHASE1:Mm9::chrX:34529453..34529474,-: Difference between revisions
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{{FFCP|EntrezGene=56526|HGNC=|MCL_coexpression_id=33|UniProt=|association_with_transcript=11bp_to_ENSMUST00000128766_5end|description=CAGE_peak_2_at_Sept6_5end|id=chrX:34529453..34529474,-|ontology_enrichment_celltype=CL:0000838!2.60e-08!12;CL:0000542!5.86e-08!13;CL:0000051!5.86e-08!13;CL:0000084!9.00e-08!11;CL:0000827!9.00e-08!11;CL:0000117!2.37e-07!23;CL:0000337!2.37e-07!23;CL:0000791!4.95e-07!9;CL:0000789!4.95e-07!9;CL:0002420!4.95e-07!9;CL:0002419!4.95e-07!9;CL:0000790!4.95e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,2.59e-08,12;CL:0000542,5.84e-08,13;CL:0000051,5.84e-08,13;CL:0000084,8.96e-08,11;CL:0000827,8.96e-08,11;CL:0000117,2.36e-07,23;CL:0000337,2.36e-07,23;CL:0000791,4.93e-07,9;CL:0000789,4.93e-07,9;CL:0002420,4.93e-07,9;CL:0002419,4.93e-07,9;CL:0000790,4.93e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!5.33e-21!94;UBERON:0007811!1.59e-18!86;UBERON:0004177!5.72e-12!29;UBERON:0002370!2.48e-11!23;UBERON:0000974!2.48e-11!23;UBERON:0004807!2.48e-11!23;UBERON:0005058!2.48e-11!23;UBERON:0003351!2.48e-11!23;UBERON:0009113!2.48e-11!23;UBERON:0003295!2.48e-11!23;UBERON:0009722!2.48e-11!23;UBERON:0005562!2.48e-11!23;UBERON:0007690!2.48e-11!23;UBERON:0003408!9.73e-11!24;UBERON:0006562!4.11e-10!24;UBERON:0001557!4.11e-10!24;UBERON:0001042!4.11e-10!24;UBERON:0008814!4.11e-10!24;UBERON:0009145!4.11e-10!24;UBERON:0002020!8.05e-10!34;UBERON:0001049!9.83e-10!52;UBERON:0005068!9.83e-10!52;UBERON:0006241!9.83e-10!52;UBERON:0007135!9.83e-10!52;UBERON:0000955!2.11e-09!50;UBERON:0006238!2.11e-09!50;UBERON:0002616!3.09e-09!49;UBERON:0000033!1.09e-08!63;UBERON:0002346!1.59e-08!71;UBERON:0003075!1.59e-08!71;UBERON:0007284!1.59e-08!71;UBERON:0002791!1.71e-08!29;UBERON:0003528!1.71e-08!29;UBERON:0001893!1.71e-08!29;UBERON:0003080!3.06e-08!40;UBERON:0003056!6.69e-08!49;UBERON:0002780!6.74e-08!39;UBERON:0001890!6.74e-08!39;UBERON:0006240!6.74e-08!39;UBERON:0001017!6.78e-08!73;UBERON:0005743!6.78e-08!73;UBERON:0002193!7.99e-08!48;UBERON:0000072!8.91e-08!27;UBERON:0002390!1.33e-07!45;UBERON:0003061!1.33e-07!45;UBERON:0000073!2.39e-07!75;UBERON:0001016!2.39e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.67e-12,29;UBERON:0005057,5.67e-12,29;UBERON:0002370,2.46e-11,23;UBERON:0000974,2.46e-11,23;UBERON:0004807,2.46e-11,23;UBERON:0005058,2.46e-11,23;UBERON:0003351,2.46e-11,23;UBERON:0009113,2.46e-11,23;UBERON:0003295,2.46e-11,23;UBERON:0009722,2.46e-11,23;UBERON:0005562,2.46e-11,23;UBERON:0007690,2.46e-11,23;UBERON:0003408,9.66e-11,24;UBERON:0000073,1.36e-10,54;UBERON:0000153,2.03e-10,43;UBERON:0006562,4.08e-10,24;UBERON:0001557,4.08e-10,24;UBERON:0001042,4.08e-10,24;UBERON:0008814,4.08e-10,24;UBERON:0009145,4.08e-10,24;UBERON:0002020,8.08e-10,34;UBERON:0001049,9.77e-10,52;UBERON:0005068,9.77e-10,52;UBERON:0006241,9.77e-10,52;UBERON:0007135,9.77e-10,52;UBERON:0002346,2.65e-09,64;UBERON:0003075,2.65e-09,64;UBERON:0007284,2.65e-09,64;UBERON:0007811,6.75e-09,36;UBERON:0003528,1.72e-08,29;UBERON:0002791,1.72e-08,29;UBERON:0001893,1.72e-08,29;UBERON:0000955,2.90e-08,47;UBERON:0006238,2.90e-08,47;UBERON:0003080,3.07e-08,40;UBERON:0002616,4.20e-08,46;UBERON:0001017,6.36e-08,73;UBERON:0003056,6.71e-08,49;UBERON:0002780,6.77e-08,39;UBERON:0001890,6.77e-08,39;UBERON:0006240,6.77e-08,39;UBERON:0010314,8.68e-08,92;UBERON:0000072,8.86e-08,27;UBERON:0002193,9.29e-08,48;UBERON:0002405,9.29e-08,48;UBERON:0002390,1.54e-07,45;UBERON:0003061,1.54e-07,45;UBERON:0000077,1.91e-07,35;UBERON:0001016,2.25e-07,75;UBERON:0010371,8.21e-07,73|phase1_expression=12.9720566154883,0,0,0,0.500895729946347,1.51091344720701,1.86890112476421,93.4852861717012,167.116213194028,207.381170321286,44.5166717386313,55.3618783427635,104.603645987967,119.154008497093,11.3257319017325,11.3386149738303,3.49780939064073,52.3667194494675,59.5076641848906,33.5267824920444,12.4163203620562,29.6879944090647,25.8587791247546,6.71968175732308,9.1763712426868,0.57423196411502,0,0.646413698057667,2.85035129184561,2.26827116783938,1.55211357458713,5.08024538767705,0.61506478758457,15.8481681015439,2.88851619751275,4.3221007793208,3.87921776898501,17.5783284909501,7.0320181007142,20.9409497589519,22.3527965451785,20.4913645487534,26.7030694167134,2.01434908760924,2.23029248682932,2.9367480345869,1.56478268869608,0.436050312760893,0.659058548203415,0.194429899074283,3.91961980551015,0,50.6703470294364,119.684753431872,102.508608738452,6.17422646486273,3.15186783932632,3.6097046459421,23.6710259205729,22.2176211294254,21.5502677192101,3.04960078862219,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,1.19840044207362,1.15265491596466,8.91730665852908,12.1505344498522,13.4607975264884,13.9968982357864,20.5407743085001,23.0282702524114,20.3192398558661,22.0612508786405,39.6417171597799,26.4312789836339,24.8842583875114,24.2670769423557,22.780423257,21.8783615633839,24.5681039121215,17.4456409109821,14.2102370432433,24.7488011797881,16.2303716110977,23.1135312823373,2.87759534666099,5.3655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9266138603782,10.6659204385394|short_description=p2@Sept6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56526 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=11bp_to_ENSMUST00000128766_5end | |||
|cluster_id=chrX:34529453..34529474,- | |||
|description=CAGE_peak_2_at_Sept6_5end | |||
|id=chrX:34529453..34529474,- | |||
|ontology_enrichment_celltype=CL:0000838!2.60e-08!12;CL:0000542!5.86e-08!13;CL:0000051!5.86e-08!13;CL:0000084!9.00e-08!11;CL:0000827!9.00e-08!11;CL:0000117!2.37e-07!23;CL:0000337!2.37e-07!23;CL:0000791!4.95e-07!9;CL:0000789!4.95e-07!9;CL:0002420!4.95e-07!9;CL:0002419!4.95e-07!9;CL:0000790!4.95e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.59e-08,12;CL:0000542,5.84e-08,13;CL:0000051,5.84e-08,13;CL:0000084,8.96e-08,11;CL:0000827,8.96e-08,11;CL:0000117,2.36e-07,23;CL:0000337,2.36e-07,23;CL:0000791,4.93e-07,9;CL:0000789,4.93e-07,9;CL:0002420,4.93e-07,9;CL:0002419,4.93e-07,9;CL:0000790,4.93e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!5.33e-21!94;UBERON:0007811!1.59e-18!86;UBERON:0004177!5.72e-12!29;UBERON:0002370!2.48e-11!23;UBERON:0000974!2.48e-11!23;UBERON:0004807!2.48e-11!23;UBERON:0005058!2.48e-11!23;UBERON:0003351!2.48e-11!23;UBERON:0009113!2.48e-11!23;UBERON:0003295!2.48e-11!23;UBERON:0009722!2.48e-11!23;UBERON:0005562!2.48e-11!23;UBERON:0007690!2.48e-11!23;UBERON:0003408!9.73e-11!24;UBERON:0006562!4.11e-10!24;UBERON:0001557!4.11e-10!24;UBERON:0001042!4.11e-10!24;UBERON:0008814!4.11e-10!24;UBERON:0009145!4.11e-10!24;UBERON:0002020!8.05e-10!34;UBERON:0001049!9.83e-10!52;UBERON:0005068!9.83e-10!52;UBERON:0006241!9.83e-10!52;UBERON:0007135!9.83e-10!52;UBERON:0000955!2.11e-09!50;UBERON:0006238!2.11e-09!50;UBERON:0002616!3.09e-09!49;UBERON:0000033!1.09e-08!63;UBERON:0002346!1.59e-08!71;UBERON:0003075!1.59e-08!71;UBERON:0007284!1.59e-08!71;UBERON:0002791!1.71e-08!29;UBERON:0003528!1.71e-08!29;UBERON:0001893!1.71e-08!29;UBERON:0003080!3.06e-08!40;UBERON:0003056!6.69e-08!49;UBERON:0002780!6.74e-08!39;UBERON:0001890!6.74e-08!39;UBERON:0006240!6.74e-08!39;UBERON:0001017!6.78e-08!73;UBERON:0005743!6.78e-08!73;UBERON:0002193!7.99e-08!48;UBERON:0000072!8.91e-08!27;UBERON:0002390!1.33e-07!45;UBERON:0003061!1.33e-07!45;UBERON:0000073!2.39e-07!75;UBERON:0001016!2.39e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.67e-12,29;UBERON:0005057,5.67e-12,29;UBERON:0002370,2.46e-11,23;UBERON:0000974,2.46e-11,23;UBERON:0004807,2.46e-11,23;UBERON:0005058,2.46e-11,23;UBERON:0003351,2.46e-11,23;UBERON:0009113,2.46e-11,23;UBERON:0003295,2.46e-11,23;UBERON:0009722,2.46e-11,23;UBERON:0005562,2.46e-11,23;UBERON:0007690,2.46e-11,23;UBERON:0003408,9.66e-11,24;UBERON:0000073,1.36e-10,54;UBERON:0000153,2.03e-10,43;UBERON:0006562,4.08e-10,24;UBERON:0001557,4.08e-10,24;UBERON:0001042,4.08e-10,24;UBERON:0008814,4.08e-10,24;UBERON:0009145,4.08e-10,24;UBERON:0002020,8.08e-10,34;UBERON:0001049,9.77e-10,52;UBERON:0005068,9.77e-10,52;UBERON:0006241,9.77e-10,52;UBERON:0007135,9.77e-10,52;UBERON:0002346,2.65e-09,64;UBERON:0003075,2.65e-09,64;UBERON:0007284,2.65e-09,64;UBERON:0007811,6.75e-09,36;UBERON:0003528,1.72e-08,29;UBERON:0002791,1.72e-08,29;UBERON:0001893,1.72e-08,29;UBERON:0000955,2.90e-08,47;UBERON:0006238,2.90e-08,47;UBERON:0003080,3.07e-08,40;UBERON:0002616,4.20e-08,46;UBERON:0001017,6.36e-08,73;UBERON:0003056,6.71e-08,49;UBERON:0002780,6.77e-08,39;UBERON:0001890,6.77e-08,39;UBERON:0006240,6.77e-08,39;UBERON:0010314,8.68e-08,92;UBERON:0000072,8.86e-08,27;UBERON:0002193,9.29e-08,48;UBERON:0002405,9.29e-08,48;UBERON:0002390,1.54e-07,45;UBERON:0003061,1.54e-07,45;UBERON:0000077,1.91e-07,35;UBERON:0001016,2.25e-07,75;UBERON:0010371,8.21e-07,73 | |||
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| |||
|short_description=p2@Sept6 | |||
}} |
Latest revision as of 20:03, 1 October 2015
Short description: | p2@Sept6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sept6_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 11bp_to_ENSMUST00000128766_5end |
EntrezGene: | Sept6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.59e-08 | 12 |
lymphocyte | 5.84e-08 | 13 |
common lymphoid progenitor | 5.84e-08 | 13 |
T cell | 8.96e-08 | 11 |
pro-T cell | 8.96e-08 | 11 |
CNS neuron (sensu Vertebrata) | 2.36e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.36e-07 | 23 |
mature alpha-beta T cell | 4.93e-07 | 9 |
alpha-beta T cell | 4.93e-07 | 9 |
immature T cell | 4.93e-07 | 9 |
mature T cell | 4.93e-07 | 9 |
immature alpha-beta T cell | 4.93e-07 | 9 |