FFCP PHASE1:Mm9::chrX:70737350..70737361,+: Difference between revisions
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{{FFCP|EntrezGene=12111|HGNC=|MCL_coexpression_id=188|UniProt=|association_with_transcript=-34bp_to_ENSMUST00000155231_5end|description=CAGE_peak_6_at_Bgn_5end|id=chrX:70737350..70737361,+|ontology_enrichment_celltype=CL:0000222!1.68e-07!7;CL:0000680!9.67e-07!6;CL:0000183!9.67e-07!6;CL:0000187!9.67e-07!6;CL:0000056!9.67e-07!6|ontology_enrichment_celltype_v019_2=CL:0000222,3.65e-30,7;CL:0000680,1.64e-26,6;CL:0000187,1.64e-26,6;CL:0000056,1.64e-26,6;CL:0000355,1.58e-17,9;CL:0002494,1.47e-14,3;CL:0000737,1.47e-14,3;CL:0000746,1.47e-14,3;CL:0000513,1.47e-14,3;CL:0000192,1.32e-13,3;CL:0000359,1.32e-13,3;CL:0002539,1.32e-13,3;CL:0000514,1.32e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!1.21e-07!33;UBERON:0004535!6.27e-07!23;UBERON:0001009!6.27e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.63e-21,5;UBERON:0007500,9.63e-21,5;UBERON:0001981,9.63e-21,5;UBERON:0002049,9.63e-21,5;UBERON:0007798,9.63e-21,5;UBERON:0004537,9.63e-21,5;UBERON:0006965,9.63e-21,5;UBERON:0001134,1.58e-17,9;UBERON:0002036,1.58e-17,9;UBERON:0002385,1.58e-17,9;UBERON:0000486,1.58e-17,9;UBERON:0007503,1.58e-17,9;UBERON:0001015,1.58e-17,9;UBERON:0002329,1.58e-17,9;UBERON:0003082,1.58e-17,9;UBERON:0003059,1.58e-17,9;UBERON:0007282,1.58e-17,9;UBERON:0004290,1.58e-17,9;UBERON:0009618,1.58e-17,9;UBERON:0000947,4.17e-17,4;UBERON:0001637,4.17e-17,4;UBERON:0004573,4.17e-17,4;UBERON:0003509,4.17e-17,4;UBERON:0004571,4.17e-17,4;UBERON:0010191,4.17e-17,4;UBERON:0004572,4.17e-17,4;UBERON:0000383,1.00e-15,10;UBERON:0007524,2.98e-14,11;UBERON:0003077,2.98e-14,11;UBERON:0007285,2.98e-14,11;UBERON:0001135,1.32e-13,3;UBERON:0004237,1.32e-13,3;UBERON:0004695,1.32e-13,3;UBERON:0002111,1.32e-13,3;UBERON:0004178,1.32e-13,3;UBERON:0004535,4.64e-11,23;UBERON:0001009,4.64e-11,23;UBERON:0002204,8.01e-08,32;UBERON:0003914,1.32e-07,47;UBERON:0004872,2.21e-07,33|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,2.63580021170738,2.38610777810186,4.69434806608824,0,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,5.40244815675489,6.87680255853016,8.76642556871652,0,0,0,0.677689064138264,1.77858959222228,0,1.97773272513395,0.7104801149461,0.898800331555214,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,1.15945795480671,1.72084775396277,0,0,0,0,0.280888840263504,4.26075806445144,6.49465011507172,3.18005617059306,0,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,0.173485326766136,0.304465478312141,0,0.452167921657868,0.352766121407114,0.125666591329675,0.247194967734374,1.01219549843938,0,0.970601099684455,0.883366073841574,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.916554274652847,0.373220911830279,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.468508622798644,0.258703370739016,0,0,0,0.43839146485515,0.834141747676794,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.536546802799238,0.116765342367169,0.658239399653922,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0.402619256281115,0,0,0,0.264450566663544,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.252946148497029,0.295220295959204,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.335012514883631,0.714130922658041,0,0,0,0,1.3109065177259,0.690739927463582,0.723245292907558,0,0,0,0,0,0.117211686592203,1.3114795630134,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0.164549020602121,0,0.23467170806371,0,0,0.32977250588296,0.645857706783622,0.120625849856312,0,0.328281799490123,0.291480836629851,0,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0.299033092087958,0,0,1.03327858782185,0.168956125490778,0.58678619322877,0.2604087696879,0.314578033277133,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0.290692833264657,0.282328141245992,0,0,0,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0.956441660344217,0.661774257358546,0.231867835620421|short_description=p6@Bgn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12111 | |||
|HGNC= | |||
|MCL_coexpression_id=188 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_ENSMUST00000155231_5end | |||
|cluster_id=chrX:70737350..70737361,+ | |||
|description=CAGE_peak_6_at_Bgn_5end | |||
|id=chrX:70737350..70737361,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.68e-07!7;CL:0000680!9.67e-07!6;CL:0000183!9.67e-07!6;CL:0000187!9.67e-07!6;CL:0000056!9.67e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.65e-30,7;CL:0000680,1.64e-26,6;CL:0000187,1.64e-26,6;CL:0000056,1.64e-26,6;CL:0000355,1.58e-17,9;CL:0002494,1.47e-14,3;CL:0000737,1.47e-14,3;CL:0000746,1.47e-14,3;CL:0000513,1.47e-14,3;CL:0000192,1.32e-13,3;CL:0000359,1.32e-13,3;CL:0002539,1.32e-13,3;CL:0000514,1.32e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.21e-07!33;UBERON:0004535!6.27e-07!23;UBERON:0001009!6.27e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.63e-21,5;UBERON:0007500,9.63e-21,5;UBERON:0001981,9.63e-21,5;UBERON:0002049,9.63e-21,5;UBERON:0007798,9.63e-21,5;UBERON:0004537,9.63e-21,5;UBERON:0006965,9.63e-21,5;UBERON:0001134,1.58e-17,9;UBERON:0002036,1.58e-17,9;UBERON:0002385,1.58e-17,9;UBERON:0000486,1.58e-17,9;UBERON:0007503,1.58e-17,9;UBERON:0001015,1.58e-17,9;UBERON:0002329,1.58e-17,9;UBERON:0003082,1.58e-17,9;UBERON:0003059,1.58e-17,9;UBERON:0007282,1.58e-17,9;UBERON:0004290,1.58e-17,9;UBERON:0009618,1.58e-17,9;UBERON:0000947,4.17e-17,4;UBERON:0001637,4.17e-17,4;UBERON:0004573,4.17e-17,4;UBERON:0003509,4.17e-17,4;UBERON:0004571,4.17e-17,4;UBERON:0010191,4.17e-17,4;UBERON:0004572,4.17e-17,4;UBERON:0000383,1.00e-15,10;UBERON:0007524,2.98e-14,11;UBERON:0003077,2.98e-14,11;UBERON:0007285,2.98e-14,11;UBERON:0001135,1.32e-13,3;UBERON:0004237,1.32e-13,3;UBERON:0004695,1.32e-13,3;UBERON:0002111,1.32e-13,3;UBERON:0004178,1.32e-13,3;UBERON:0004535,4.64e-11,23;UBERON:0001009,4.64e-11,23;UBERON:0002204,8.01e-08,32;UBERON:0003914,1.32e-07,47;UBERON:0004872,2.21e-07,33 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,2.63580021170738,2.38610777810186,4.69434806608824,0,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,5.40244815675489,6.87680255853016,8.76642556871652,0,0,0,0.677689064138264,1.77858959222228,0,1.97773272513395,0.7104801149461,0.898800331555214,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,1.15945795480671,1.72084775396277,0,0,0,0,0.280888840263504,4.26075806445144,6.49465011507172,3.18005617059306,0,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,0.173485326766136,0.304465478312141,0,0.452167921657868,0.352766121407114,0.125666591329675,0.247194967734374,1.01219549843938,0,0.970601099684455,0.883366073841574,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.916554274652847,0.373220911830279,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.468508622798644,0.258703370739016,0,0,0,0.43839146485515,0.834141747676794,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.536546802799238,0.116765342367169,0.658239399653922,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0.402619256281115,0,0,0,0.264450566663544,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.252946148497029,0.295220295959204,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.335012514883631,0.714130922658041,0,0,0,0,1.3109065177259,0.690739927463582,0.723245292907558,0,0,0,0,0,0.117211686592203,1.3114795630134,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0.164549020602121,0,0.23467170806371,0,0,0.32977250588296,0.645857706783622,0.120625849856312,0,0.328281799490123,0.291480836629851,0,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0.299033092087958,0,0,1.03327858782185,0.168956125490778,0.58678619322877,0.2604087696879,0.314578033277133,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0.290692833264657,0.282328141245992,0,0,0,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0.956441660344217,0.661774257358546,0.231867835620421 | |||
|short_description=p6@Bgn | |||
}} |
Latest revision as of 23:33, 1 October 2015
Short description: | p6@Bgn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Bgn_5end |
Coexpression cluster: | MCL_coexpression_mm9:188 |
Association with transcript: | -34bp_to_ENSMUST00000155231_5end |
EntrezGene: | Bgn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.65e-30 | 7 |
muscle precursor cell | 1.64e-26 | 6 |
muscle cell | 1.64e-26 | 6 |
myoblast | 1.64e-26 | 6 |
multi-potent skeletal muscle stem cell | 1.58e-17 | 9 |
cardiocyte | 1.47e-14 | 3 |
striated muscle cell | 1.47e-14 | 3 |
cardiac muscle cell | 1.47e-14 | 3 |
cardiac muscle myoblast | 1.47e-14 | 3 |
smooth muscle cell | 1.32e-13 | 3 |
vascular associated smooth muscle cell | 1.32e-13 | 3 |
aortic smooth muscle cell | 1.32e-13 | 3 |
smooth muscle myoblast | 1.32e-13 | 3 |