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FFCP PHASE1:Mm9::chr12:73509675..73509727,-: Difference between revisions

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(Created page with "{{FFCP |id=chr12:73509675..73509727,- |short_description=p3@Rtn1 |description=CAGE_peak_3_at_Rtn1_5end |association_with_transcript=-137bp_to_ENSMUST00000101331_5end |Ent...")
 
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{{FFCP
{{FFCP
|id=chr12:73509675..73509727,-
|DHSsupport=NA
|short_description=p3@Rtn1
|DPIdataset=NA
|description=CAGE_peak_3_at_Rtn1_5end
|association_with_transcript=-137bp_to_ENSMUST00000101331_5end
|EntrezGene=104001
|EntrezGene=104001
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q4FZ95
|UniProt=Q4FZ95
|association_with_transcript=-137bp_to_ENSMUST00000101331_5end
|cluster_id=chr12:73509675..73509727,-
|description=CAGE_peak_3_at_Rtn1_5end
|id=chr12:73509675..73509727,-
|ontology_enrichment_celltype=CL:0000221!7.21e-16!44;CL:0000133!7.21e-16!44;CL:0002319!1.76e-15!43;CL:0000055!7.47e-14!50;CL:0000540!3.97e-12!33;CL:0000047!3.97e-12!33;CL:0000031!3.97e-12!33;CL:0000404!3.97e-12!33;CL:0000117!1.24e-11!23;CL:0000337!1.24e-11!23;CL:0000393!1.50e-10!39;CL:0000211!1.50e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,3.79e-16,44;CL:0000133,3.79e-16,44;CL:0002319,9.42e-16,43;CL:0000540,2.47e-12,33;CL:0000047,2.47e-12,33;CL:0000031,2.47e-12,33;CL:0000404,2.47e-12,33;CL:0000117,7.92e-12,23;CL:0000337,7.92e-12,23;CL:0000393,9.72e-11,39;CL:0000211,9.72e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.39e-34,73;UBERON:0001016,1.63e-33,75;UBERON:0004121,3.17e-31,95;UBERON:0000924,3.17e-31,95;UBERON:0006601,3.17e-31,95;UBERON:0002346,2.34e-28,64;UBERON:0003075,2.34e-28,64;UBERON:0007284,2.34e-28,64;UBERON:0000073,1.39e-27,54;UBERON:0001049,2.40e-26,52;UBERON:0005068,2.40e-26,52;UBERON:0006241,2.40e-26,52;UBERON:0007135,2.40e-26,52;UBERON:0010314,1.64e-24,92;UBERON:0010371,1.94e-24,73;UBERON:0000955,1.94e-23,47;UBERON:0006238,1.94e-23,47;UBERON:0002616,8.18e-23,46;UBERON:0003056,1.48e-20,49;UBERON:0002020,1.98e-19,34;UBERON:0003080,2.63e-19,40;UBERON:0002780,1.30e-18,39;UBERON:0001890,1.30e-18,39;UBERON:0006240,1.30e-18,39;UBERON:0003528,8.87e-17,29;UBERON:0002791,8.87e-17,29;UBERON:0001893,8.87e-17,29;UBERON:0000956,2.30e-12,21;UBERON:0001869,2.30e-12,21;UBERON:0000203,2.30e-12,21;UBERON:0000025,6.20e-12,114;UBERON:0004111,1.24e-11,122;UBERON:0002619,8.68e-11,17;UBERON:0002021,9.00e-08,10;UBERON:0000411,9.00e-08,10;UBERON:0001950,9.00e-08,10;UBERON:0003076,1.47e-07,12;UBERON:0003057,1.47e-07,12
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|phase1_expression=9.28863313207805,0.348975407639361,0.909998478779072,0,0,0.33575854382378,0.233612640595526,0,0.281577444303333,0,0,0.0797721589953364,0,0,0,1.01237633694913,0.699561878128147,2.20823515750766,1.91960207048034,2.12194825899015,28.4895022006084,0,0,0.95995453676044,1.14704640533585,0,0,0.215471232685889,0,1.00812051903972,0.665191531965914,0,0,0,0,0,0,0,3.1253413780952,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0.202753862439029,0.183546752161682,17.2126095756569,55.5964148770139,70.7389508404999,78.1608194278619,22.2578410384326,63.2511283205875,0.167782606057736,0,0,15.4355661621568,17.1920063963254,34.5500301825886,60.8972547187389,74.0587370980846,47.5373552629634,8.4711133017283,9.78224275722253,1.7997994345628,2.96659908770092,3.5524005747305,87.1836321608558,189.803842828848,13.7907184370275,19.3058491814318,15.984697062705,80.2679266174688,71.3405387273712,24.3756690437759,12.8432931164437,22.9804696652505,77.0811166995721,84.2736431362239,96.7721159514334,63.964849549144,55.9904378846747,51.5704236851192,99.9475136424944,92.8558306552272,98.2492733204889,73.9517749538906,68.7655218259667,58.1566270974938,1.96888102666279,4.76100828672749,0.289864488701678,5.16254326188832,0,0.539703191637817,3.24888208723835,0.448026887097336,7.02222100658759,0,0,0,21.4081998060554,0,0,0,0,0,0,5.709193985953,11.9111426477699,10.8362761517322,4.68410382268567,11.5696881758614,5.30415643688935,6.33035090321015,7.4080885495494,3.64433114856059,7.66304399976559,4.916378135277,0.884610551949874,1.61766849947409,0.441683036920787,0.969750506270444,0,151.36767205497,118.546836056416,2.55457055208591,0.11981512450592,0,0.381210681219194,146.944617256131,261.690344812254,55.4135692817732,188.773211728812,171.585071868652,109.919875572007,146.017136760982,2.95334155165917,1.24406970610093,2.0217820674694,17.6771158944638,1.17108398666433,4.82794419310293,4.86167750474443,10.5493372485001,21.5675702309709,28.953700784376,28.672727715277,33.372734825333,1.5089759505299,1.13463648100692,0.879755620819744,1.31517439456545,0.556094498451196,0.348252166522167,0.823128545631774,0.796137067273973,0,0,0,4.55676699578104,3.04883877975425,2.70093092191522,1.65721314909647,1.37734962223183,1.69693824176116,0.465067889500816,1.87791380979733,2.56883753207773,1.48103864922132,2.13417703302824,1.78351381000883,2.33919979880532,3.29325172936576,2.68412837520744,182.111095456534,58.5527244438128,1.32167513193519,0.793351699990633,1.70630600428187,1.85789337488351,2.83508414908605,1.4117846723634,2.00140239460383,3.04361001780095,1.42358718463353,3.78807595865225,4.27269854960458,4.17808591286417,4.09424582950152,0.898819408654221,4.32276099749388,3.58454291857861,1.32767530667157,1.14248512609729,2.25415471346161,3.25842124552503,2.32742984601151,2.66516115583211,2.52946148497029,2.80459281161244,2.35498091762062,1.1105744752962,1.48226313543574,1.66845105716094,1.96558995113203,0.899448449539415,1.62288097110802,2.65294875727659,1.2731292589071,1.15078454980324,2.2698931748505,0.549122826376163,0,4.09355042435354,3.43241440426017,2.02063102357689,2.15276896226295,2.8946611281802,11.4546977903295,11.1799932944586,5.21487924614483,3.39490171550376,2.58159273117352,3.1826188913945,4.76087281772027,5.65887578787617,6.46304090835383,6.64394068946325,5.42146213435456,7.53771247692395,7.42545422023351,8.38964539772767,1.50791283939272,0,5.4094070032094,6.89841865761831,94.0826457328461,80.2900053156592,0,2.27223834483936,7.2566890465739,10.5418460960092,14.6487910458303,5.01834475700359,5.56996685205985,4.24614796183249,5.66734982344852,14.028281179743,11.4633455604492,89.6486472816842,20.2974321847824,1.42452482933804,1.30309567482861,36.6233672999029,2.65490276679926,1.21390318077491,0.302323556964751,0.754420319023592,1.47650946440386,3.07435147943927,1.55056975900933,2.18120237686503,2.49548164869305,3.16036757935816,0,1.03135543248187,43.2358299307311,5.58189391497062,5.82114077022395,4.28674070063185,3.72414490648775,12.664186049747,12.9993726275676,17.3545020995322,21.8244688499251,13.7690846061483,3.52845436887939,2.96795255294664,0.645857706783622,0.844380948994182,0.835606408021955,0.492422699235184,4.95517422270746,97.3482835555176,3.58828849675491,1.03193433981611,1.11116716421827,2.63715839806567,4.37421528707281,6.63456702298916,0.169978429993855,0.139951452323658,0.138199973804424,2.86401185404534,0.949007980743406,1.82987520414164,1.29606408986162,2.09088296014469,1.09181281873089,3.77620169877498,3.2234847732881,2.6175594198403,2.59229946583586,2.4853572523477,2.25477175473676,0.149516546043979,0.330916980914195,0.194451188344048,0.904118764344118,0.168956125490778,0.938857909166032,0.2604087696879,0.104859344425711,0.966336483304024,0.576060012515731,1.58005560314089,1.41907650703115,0.616265742988964,0.129920822977795,0.895133478337407,0.39736270956253,0.841368146639782,0.886137163047463,0.403865799792591,0.609654453239999,0.504130925684203,1.16949456887703,1.05833025804362,1.16876902181569,3.40095575422817,5.32766288097755,5.02397597013064,10.9125000636651,5.21611903886914,4.129014459926,6.95976172215607,0.857473516316263,1.00314420807073,112.385616680796,110.017731525215,101.975401392213,89.8792143657486,128.11043119711,155.611142862278,151.205040051924,136.897645780163,163.584409643298,151.186011031531,4.15149390336707,9.57659696162474,9.21961471072325,7.77941494618541,13.6248555708189,12.869045591501,10.6678429344775,14.8345241212004,12.194929964489,9.8551912587881,15.9691958930851,13.9583492625696,10.5814903440967,11.7806280424959,10.4532553499216,11.9073422820768,12.1678542242098,9.83837024364896,10.3021475200827,13.3951017322302,8.22886205724997,8.87379030796687,8.58370283810355,9.59286349773368,10.6343599869324,11.0845136338096,11.7073902638574,11.5750673032651,8.82726739998101,9.53941861818155,12.1007718486658,12.7070782264477,9.41231399290286,9.91595783590182,10.0311437710194,30.2270799304915,13.3341016813883,14.1814895671877,7.07766828654721,7.0589254118245,6.95603506861264
|short_description=p3@Rtn1
}}
}}

Latest revision as of 18:17, 26 September 2015

Short description:p3@Rtn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rtn1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -137bp_to_ENSMUST00000101331_5end
EntrezGene:Rtn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rtn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A328.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C255.60
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B870.74
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C378.16
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C463.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C534.55
Mouse Granule cells, donor1.CNhs12131.11713-123C360.90
Mouse Granule cells, donor2.CNhs12357.11731-123E374.06
Mouse Granule cells, donor3.CNhs12108.11636-122C747.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C887.18
Mouse Microglia, donor2.CNhs12634.11736-123E8189.80
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.79
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.31
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.98
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F180.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D571.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.84
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D377.08
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F384.27
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D796.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D463.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F455.99
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D851.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E499.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E592.86
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I698.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D673.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F668.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E158.16
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F94.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.71
accessory axillary lymph node, adult.CNhs10475.1063-29H911.91
adrenal gland, adult.CNhs10508.49-24D710.84
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D611.57
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F56.33
adrenal gland, neonate N00.CNhs11191.1311-23C17.41
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A87.66
aorta, adult.CNhs10498.46-23H14.92
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2151.37
cerebellum, neonate N30.CNhs11135.1395-42I2118.55
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A4146.94
corpus striatum, adult.CNhs10487.19-21D8261.69
corpus striatum, neonate N00.CNhs11226.630-43F155.41
cortex, adult.CNhs10473.12-14D5188.77
cortex, neonate N30.CNhs11107.1392-42F2171.59
diencephalon, adult.CNhs10482.20-12F2109.92
diencephalon, neonate N30.CNhs11201.1388-42B2146.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G417.68
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D410.55
eyeball, neonate N00.CNhs11207.633-15C621.57
eyeball, neonate N01.CNhs11140.1532-43E728.95
eyeball, neonate N02.CNhs11205.1551-44G828.67
eyeball, neonate N16.CNhs11188.777-19A233.37
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I62.34
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E8182.11
hippocampus, neonate N00.CNhs11228.627-43G158.55
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.67
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B111.45
lung, embryo E12.CNhs10522.354-16G211.18
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A47.54
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C294.08
medulla oblongata, neonate N30.CNhs11200.1396-42A380.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.03
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I989.65
ovary, adult.CNhs10507.91-2I720.30
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G636.62
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G843.24
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C75.82
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F612.66
pituitary gland, embryo E17.CNhs11039.1265-44F513.00
pituitary gland, neonate N00.CNhs11190.1308-22E917.35
placenta, adult pregnant day10.CNhs10472.539-13I721.82
placenta, adult pregnant day17.CNhs10464.577-18G313.77
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C997.35
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H14.37
spleen, neonate N25.CNhs11099.1354-25G36.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.02
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.91
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E56.96
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1112.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2110.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3101.98
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D789.88
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4128.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5155.61
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6151.21
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7136.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8163.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9151.19
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B113.62
whole body, embryo E16.CNhs10514.453-14F212.87
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.40
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.92
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I530.23
whole body, embryo E18.CNhs10516.493-3B313.33
whole body, neonate N00.CNhs10525.657-19C214.18
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.79e-1644
neurectodermal cell3.79e-1644
neural cell9.42e-1643
neuron2.47e-1233
neuronal stem cell2.47e-1233
neuroblast2.47e-1233
electrically signaling cell2.47e-1233
CNS neuron (sensu Vertebrata)7.92e-1223
neuroblast (sensu Vertebrata)7.92e-1223
electrically responsive cell9.72e-1139
electrically active cell9.72e-1139

Uber anatomy
Ontology termp-valuen
central nervous system3.39e-3473
nervous system1.63e-3375
ectoderm-derived structure3.17e-3195
ectoderm3.17e-3195
presumptive ectoderm3.17e-3195
neurectoderm2.34e-2864
neural plate2.34e-2864
presumptive neural plate2.34e-2864
regional part of nervous system1.39e-2754
neural tube2.40e-2652
neural rod2.40e-2652
future spinal cord2.40e-2652
neural keel2.40e-2652
structure with developmental contribution from neural crest1.64e-2492
ecto-epithelium1.94e-2473
brain1.94e-2347
future brain1.94e-2347
regional part of brain8.18e-2346
pre-chordal neural plate1.48e-2049
gray matter1.98e-1934
anterior neural tube2.63e-1940
regional part of forebrain1.30e-1839
forebrain1.30e-1839
future forebrain1.30e-1839
brain grey matter8.87e-1729
regional part of telencephalon8.87e-1729
telencephalon8.87e-1729
cerebral cortex2.30e-1221
cerebral hemisphere2.30e-1221
pallium2.30e-1221
tube6.20e-12114
anatomical conduit1.24e-11122
regional part of cerebral cortex8.68e-1117
occipital lobe9.00e-0810
visual cortex9.00e-0810
neocortex9.00e-0810
posterior neural tube1.47e-0712
chordal neural plate1.47e-0712
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