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FFCP PHASE1:Mm9::chr16:44332738..44332781,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:44332738..44332781,-
|DHSsupport=NA
|short_description=p2@Sidt1
|DPIdataset=NA
|description=CAGE_peak_2_at_Sidt1_5end
|association_with_transcript=-84bp_to_ENSMUST00000124651_5end
|EntrezGene=320007
|EntrezGene=320007
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-84bp_to_ENSMUST00000124651_5end
|cluster_id=chr16:44332738..44332781,-
|description=CAGE_peak_2_at_Sidt1_5end
|id=chr16:44332738..44332781,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,2.31e-07,23;CL:0000337,2.31e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!6.35e-20!86;UBERON:0000153!8.15e-18!94;UBERON:0001049!2.03e-15!52;UBERON:0005068!2.03e-15!52;UBERON:0006241!2.03e-15!52;UBERON:0007135!2.03e-15!52;UBERON:0002346!1.31e-14!71;UBERON:0003075!1.31e-14!71;UBERON:0007284!1.31e-14!71;UBERON:0000955!4.56e-14!50;UBERON:0006238!4.56e-14!50;UBERON:0000033!7.09e-14!63;UBERON:0002616!1.55e-13!49;UBERON:0004121!3.02e-11!102;UBERON:0000924!3.02e-11!102;UBERON:0006601!3.02e-11!102;UBERON:0001017!8.18e-11!73;UBERON:0005743!8.18e-11!73;UBERON:0002020!1.62e-10!34;UBERON:0003080!1.82e-10!40;UBERON:0003056!5.36e-10!49;UBERON:0002780!6.20e-10!39;UBERON:0001890!6.20e-10!39;UBERON:0006240!6.20e-10!39;UBERON:0000073!7.80e-10!75;UBERON:0001016!7.80e-10!75;UBERON:0000064!1.82e-08!99;UBERON:0002021!2.74e-08!10;UBERON:0000411!2.74e-08!10;UBERON:0001950!2.74e-08!10;UBERON:0002791!1.28e-07!29;UBERON:0003528!1.28e-07!29;UBERON:0001893!1.28e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-21,54;UBERON:0001049,6.03e-20,52;UBERON:0005068,6.03e-20,52;UBERON:0006241,6.03e-20,52;UBERON:0007135,6.03e-20,52;UBERON:0001017,2.46e-16,73;UBERON:0002346,5.71e-16,64;UBERON:0003075,5.71e-16,64;UBERON:0007284,5.71e-16,64;UBERON:0000955,6.67e-16,47;UBERON:0006238,6.67e-16,47;UBERON:0001016,1.94e-15,75;UBERON:0002616,3.33e-15,46;UBERON:0010371,6.51e-13,73;UBERON:0002020,6.96e-13,34;UBERON:0003080,7.81e-13,40;UBERON:0004121,9.37e-13,95;UBERON:0000924,9.37e-13,95;UBERON:0006601,9.37e-13,95;UBERON:0002780,4.06e-12,39;UBERON:0001890,4.06e-12,39;UBERON:0006240,4.06e-12,39;UBERON:0003056,6.53e-11,49;UBERON:0002021,7.42e-11,10;UBERON:0000411,7.42e-11,10;UBERON:0001950,7.42e-11,10;UBERON:0010314,8.23e-11,92;UBERON:0003408,2.38e-09,24;UBERON:0003528,5.19e-09,29;UBERON:0002791,5.19e-09,29;UBERON:0001893,5.19e-09,29;UBERON:0006562,8.63e-09,24;UBERON:0001557,8.63e-09,24;UBERON:0001042,8.63e-09,24;UBERON:0008814,8.63e-09,24;UBERON:0009145,8.63e-09,24;UBERON:0002370,1.32e-08,23;UBERON:0000974,1.32e-08,23;UBERON:0004807,1.32e-08,23;UBERON:0005058,1.32e-08,23;UBERON:0003351,1.32e-08,23;UBERON:0009113,1.32e-08,23;UBERON:0003295,1.32e-08,23;UBERON:0009722,1.32e-08,23;UBERON:0005562,1.32e-08,23;UBERON:0007690,1.32e-08,23;UBERON:0003076,2.83e-08,12;UBERON:0003057,2.83e-08,12;UBERON:0002619,2.36e-07,17;UBERON:0000072,3.95e-07,27
|phase1_expression=0.480446541314382,0,0,0,0,1.34303417529512,1.16806320297763,3.22808308603941,0.140788722151667,2.57470978954193,2.22583358693156,5.66382328866889,2.22560948910567,3.3219752919219,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.959801035240171,0.42438965179803,2.04103896362567,0,0,0,0.45881856213434,0,0,0.215471232685889,0.570070258369122,1.00812051903972,0.886922042621219,0,0,0,0.577703239502549,0.664938581433969,1.63335485009895,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.699932108126813,0,0.335565212115473,2.90144856804538,12.4354705682712,0,0,0,1.41621522601718,2.11596391708813,3.1691570175309,0,0.889294796111139,0,0,0,0,0,0.725827286159344,0.540023753326763,0.420649922702764,11.4260393761521,14.5773237028065,0,0.191690942036473,0,6.60695285996332,7.40586560894089,5.37622866396852,1.31886287730194,1.82975287204819,1.56274011167028,2.79182999001381,7.87867654044352,8.09830713217094,20.6240009831567,17.3693450574906,5.40558392893372,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0,0,0.5709193985953,5.17875767294343,3.41416919849097,1.04091196059682,1.52232739156071,1.15307748628029,1.20578112442098,1.41106448562846,1.63366568728578,0,0.86759614151947,0,0,0,0,0,7.31951992528868,8.58731497935166,0,0.11981512450592,0,0,7.48953197024113,4.11750542536764,0.502617408451458,11.4724051326902,8.69432554923124,4.98691306942944,6.16516799657479,0,0,0,4.20883711772948,0.130120442962704,0,0.540186389416048,0.30140963567143,0.272145996605311,1.0249097622788,0.843315521037559,2.06962696591213,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0.134206418760372,14.2997165023607,4.21908910755066,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0.571242563048644,1.1270773567308,0,0.193952487167626,0.420814919341911,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.923765950833023,0.189491411770485,0,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0.491764273019036,2.48343071674259,4.17431533968259,3.16471553798949,0,0,0,0,0,0,0,0,0,0,0,6.10510501201433,0.141940085208269,0.35613120733451,0.488660878060728,0.659880491890142,0,0,0,0.754420319023592,1.18120757152309,0.614870295887855,0.258428293168221,0.363533729477506,0,0,0,0,0,0.36012218806262,1.03486947026204,2.14337035031592,6.20690817747958,3.92411398724555,4.77192159746151,3.65357938937519,0.23467170806371,0,3.52845436887939,0.32977250588296,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,0.291480836629851,2.78137953015765,1.02522528478712,0.206386867963223,0.370389054739423,0,0.546776910884101,0.228778173206523,0.169978429993855,0.139951452323658,0,1.90934123603023,0,0.203319467126849,0.756037385752609,0.836353184057875,0.436725127492355,1.21377911746339,1.40510874733071,1.83229159388821,0.518459893167171,10.5627683224777,0,0,0,0,0,0,0,0,0,0,0,4.74016680942267,1.62180172232131,5.13554785824136,2.85825810551149,6.26593434836185,6.55648470778174,4.08664528367894,2.21534290761866,2.62512769865184,2.89585865288999,1.41156659191577,3.50848370663109,2.69393156592922,7.24636793525727,1.13365191807606,0,0,0,5.79568782096571,0.187682475451182,0.73260649706906,0.428736758158132,2.50786052017682,13.5540442228096,17.4923589872727,16.0410743763031,15.1230800462445,20.5524755931193,11.3309084608455,14.1754725048679,11.7083512838297,11.3285602246051,16.5683299760582,0,0.798049746802062,1.02440163452481,1.45864030240976,0.419226325255965,0.551530525350042,1.11123363900808,1.64828045791115,1.60459604795908,0.505394423527595,1.01391719956096,0.565879024158229,1.21733959710847,1.85672941974121,1.09127391015665,1.42888107384922,1.39061191133827,0.578727661391115,2.88460130562315,1.47198920134397,2.40008476669791,1.77475806159337,2.14592570952589,1.59881058295561,1.59985946706062,1.60767754994185,0.914639864363863,2.36762740294059,0.814824683075171,0.561142271657738,1.66089025373844,0.886540341380071,0.818462086339379,1.85924209423159,0.385813221962283,2.24829520144151,0.701794825336225,1.28922632428979,1.14772999241306,0.661774257358546,0.695603506861264
|phase1_expression=0.480446541314382,0,0,0,0,1.34303417529512,1.16806320297763,3.22808308603941,0.140788722151667,2.57470978954193,2.22583358693156,5.66382328866889,2.22560948910567,3.3219752919219,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.959801035240171,0.42438965179803,2.04103896362567,0,0,0,0.45881856213434,0,0,0.215471232685889,0.570070258369122,1.00812051903972,0.886922042621219,0,0,0,0.577703239502549,0.664938581433969,1.63335485009895,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.699932108126813,0,0.335565212115473,2.90144856804538,12.4354705682712,0,0,0,1.41621522601718,2.11596391708813,3.1691570175309,0,0.889294796111139,0,0,0,0,0,0.725827286159344,0.540023753326763,0.420649922702764,11.4260393761521,14.5773237028065,0,0.191690942036473,0,6.60695285996332,7.40586560894089,5.37622866396852,1.31886287730194,1.82975287204819,1.56274011167028,2.79182999001381,7.87867654044352,8.09830713217094,20.6240009831567,17.3693450574906,5.40558392893372,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0,0,0.5709193985953,5.17875767294343,3.41416919849097,1.04091196059682,1.52232739156071,1.15307748628029,1.20578112442098,1.41106448562846,1.63366568728578,0,0.86759614151947,0,0,0,0,0,7.31951992528868,8.58731497935166,0,0.11981512450592,0,0,7.48953197024113,4.11750542536764,0.502617408451458,11.4724051326902,8.69432554923124,4.98691306942944,6.16516799657479,0,0,0,4.20883711772948,0.130120442962704,0,0.540186389416048,0.30140963567143,0.272145996605311,1.0249097622788,0.843315521037559,2.06962696591213,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0.134206418760372,14.2997165023607,4.21908910755066,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0.571242563048644,1.1270773567308,0,0.193952487167626,0.420814919341911,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.923765950833023,0.189491411770485,0,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0.491764273019036,2.48343071674259,4.17431533968259,3.16471553798949,0,0,0,0,0,0,0,0,0,0,0,6.10510501201433,0.141940085208269,0.35613120733451,0.488660878060728,0.659880491890142,0,0,0,0.754420319023592,1.18120757152309,0.614870295887855,0.258428293168221,0.363533729477506,0,0,0,0,0,0.36012218806262,1.03486947026204,2.14337035031592,6.20690817747958,3.92411398724555,4.77192159746151,3.65357938937519,0.23467170806371,0,3.52845436887939,0.32977250588296,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,0.291480836629851,2.78137953015765,1.02522528478712,0.206386867963223,0.370389054739423,0,0.546776910884101,0.228778173206523,0.169978429993855,0.139951452323658,0,1.90934123603023,0,0.203319467126849,0.756037385752609,0.836353184057875,0.436725127492355,1.21377911746339,1.40510874733071,1.83229159388821,0.518459893167171,10.5627683224777,0,0,0,0,0,0,0,0,0,0,0,4.74016680942267,1.62180172232131,5.13554785824136,2.85825810551149,6.26593434836185,6.55648470778174,4.08664528367894,2.21534290761866,2.62512769865184,2.89585865288999,1.41156659191577,3.50848370663109,2.69393156592922,7.24636793525727,1.13365191807606,0,0,0,5.79568782096571,0.187682475451182,0.73260649706906,0.428736758158132,2.50786052017682,13.5540442228096,17.4923589872727,16.0410743763031,15.1230800462445,20.5524755931193,11.3309084608455,14.1754725048679,11.7083512838297,11.3285602246051,16.5683299760582,0,0.798049746802062,1.02440163452481,1.45864030240976,0.419226325255965,0.551530525350042,1.11123363900808,1.64828045791115,1.60459604795908,0.505394423527595,1.01391719956096,0.565879024158229,1.21733959710847,1.85672941974121,1.09127391015665,1.42888107384922,1.39061191133827,0.578727661391115,2.88460130562315,1.47198920134397,2.40008476669791,1.77475806159337,2.14592570952589,1.59881058295561,1.59985946706062,1.60767754994185,0.914639864363863,2.36762740294059,0.814824683075171,0.561142271657738,1.66089025373844,0.886540341380071,0.818462086339379,1.85924209423159,0.385813221962283,2.24829520144151,0.701794825336225,1.28922632428979,1.14772999241306,0.661774257358546,0.695603506861264
|short_description=p2@Sidt1
}}
}}

Latest revision as of 13:52, 25 September 2015

Short description:p2@Sidt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sidt1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -84bp_to_ENSMUST00000124651_5end
EntrezGene:Sidt1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sidt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E814.30
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B96.21
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I25.14
thymus, embryo E16.CNhs11002.456-26C52.86
thymus, embryo E17.CNhs10581.478-18C16.27
thymus, embryo E18.CNhs10595.1273-19G46.56
thymus, neonate N02.CNhs11181.1541-43F84.09
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G27.25
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.80
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A420.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.31e-0723
neuroblast (sensu Vertebrata)2.31e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.05e-2154
neural tube6.03e-2052
neural rod6.03e-2052
future spinal cord6.03e-2052
neural keel6.03e-2052
central nervous system2.46e-1673
neurectoderm5.71e-1664
neural plate5.71e-1664
presumptive neural plate5.71e-1664
brain6.67e-1647
future brain6.67e-1647
nervous system1.94e-1575
regional part of brain3.33e-1546
ecto-epithelium6.51e-1373
gray matter6.96e-1334
anterior neural tube7.81e-1340
ectoderm-derived structure9.37e-1395
ectoderm9.37e-1395
presumptive ectoderm9.37e-1395
regional part of forebrain4.06e-1239
forebrain4.06e-1239
future forebrain4.06e-1239
pre-chordal neural plate6.53e-1149
occipital lobe7.42e-1110
visual cortex7.42e-1110
neocortex7.42e-1110
structure with developmental contribution from neural crest8.23e-1192
gland of gut2.38e-0924
brain grey matter5.19e-0929
regional part of telencephalon5.19e-0929
telencephalon5.19e-0929
pharynx8.63e-0924
upper respiratory tract8.63e-0924
chordate pharynx8.63e-0924
pharyngeal arch system8.63e-0924
pharyngeal region of foregut8.63e-0924
thymus1.32e-0823
neck1.32e-0823
respiratory system epithelium1.32e-0823
hemolymphoid system gland1.32e-0823
pharyngeal epithelium1.32e-0823
thymic region1.32e-0823
pharyngeal gland1.32e-0823
entire pharyngeal arch endoderm1.32e-0823
thymus primordium1.32e-0823
early pharyngeal endoderm1.32e-0823
posterior neural tube2.83e-0812
chordal neural plate2.83e-0812
regional part of cerebral cortex2.36e-0717
segment of respiratory tract3.95e-0727
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