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FFCP PHASE1:Mm9::chr17:35301958..35301971,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:35301958..35301971,-
|DHSsupport=NA
|short_description=p9@Prrc2a
|DPIdataset=NA
|description=CAGE_peak_9_at_Prrc2a_5end
|association_with_transcript=-116bp_to_ENSMUST00000025253_5end
|EntrezGene=53761
|EntrezGene=53761
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q7TSC1
|UniProt=Q7TSC1
|association_with_transcript=-116bp_to_ENSMUST00000025253_5end
|cluster_id=chr17:35301958..35301971,-
|description=CAGE_peak_9_at_Prrc2a_5end
|id=chr17:35301958..35301971,-
|ontology_enrichment_celltype=CL:0000117!8.53e-08!23;CL:0000337!8.53e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.60e-11,23;CL:0000337,1.60e-11,23;CL:0000540,5.22e-07,33;CL:0000047,5.22e-07,33;CL:0000031,5.22e-07,33;CL:0000404,5.22e-07,33;CL:0002609,8.87e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.39e-12!34;UBERON:0002791!5.64e-11!29;UBERON:0003528!5.64e-11!29;UBERON:0001893!5.64e-11!29;UBERON:0000153!2.11e-10!94;UBERON:0007811!4.27e-10!86;UBERON:0001049!5.45e-10!52;UBERON:0005068!5.45e-10!52;UBERON:0006241!5.45e-10!52;UBERON:0007135!5.45e-10!52;UBERON:0000955!1.18e-09!50;UBERON:0006238!1.18e-09!50;UBERON:0002616!2.73e-09!49;UBERON:0000956!2.90e-09!21;UBERON:0001869!2.90e-09!21;UBERON:0000203!2.90e-09!21;UBERON:0000033!5.23e-09!63;UBERON:0003080!9.12e-09!40;UBERON:0003056!1.78e-08!49;UBERON:0002780!1.82e-08!39;UBERON:0001890!1.82e-08!39;UBERON:0006240!1.82e-08!39;UBERON:0002619!1.90e-07!17;UBERON:0000064!4.08e-07!99;UBERON:0001017!7.51e-07!73;UBERON:0005743!7.51e-07!73;UBERON:0002021!8.58e-07!10;UBERON:0000411!8.58e-07!10;UBERON:0001950!8.58e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.14e-22,34;UBERON:0003528,3.74e-20,29;UBERON:0002791,3.74e-20,29;UBERON:0001893,3.74e-20,29;UBERON:0000956,1.16e-16,21;UBERON:0001869,1.16e-16,21;UBERON:0000203,1.16e-16,21;UBERON:0000073,5.72e-16,54;UBERON:0001049,2.63e-15,52;UBERON:0005068,2.63e-15,52;UBERON:0006241,2.63e-15,52;UBERON:0007135,2.63e-15,52;UBERON:0002780,4.80e-15,39;UBERON:0001890,4.80e-15,39;UBERON:0006240,4.80e-15,39;UBERON:0003080,1.59e-14,40;UBERON:0002619,5.16e-14,17;UBERON:0002616,2.70e-13,46;UBERON:0000955,6.93e-13,47;UBERON:0006238,6.93e-13,47;UBERON:0002021,9.25e-13,10;UBERON:0000411,9.25e-13,10;UBERON:0001950,9.25e-13,10;UBERON:0001017,2.27e-12,73;UBERON:0002346,3.64e-12,64;UBERON:0003075,3.64e-12,64;UBERON:0007284,3.64e-12,64;UBERON:0003056,6.48e-12,49;UBERON:0001016,7.69e-12,75;UBERON:0010371,9.38e-11,73;UBERON:0004121,2.67e-09,95;UBERON:0000924,2.67e-09,95;UBERON:0006601,2.67e-09,95;UBERON:0000369,4.42e-08,5;UBERON:0002435,4.42e-08,5;UBERON:0000204,4.42e-08,5;UBERON:0010082,4.42e-08,5
|phase1_expression=0.640595388419176,0,0.454999239389536,0.60492842261366,0,0.33575854382378,0.467225281191051,0.774739940649458,0.422366166455,1.17032263160997,0.34243593645101,0.0797721589953364,1.71200729931206,0.524522414513984,0.666219523631325,0.202475267389826,1.39912375625629,0.315462165358238,0.548457734422955,0.84877930359606,2.89147186513637,0.297872853602656,0.261199789138935,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0.204169356262369,2.09265815368454,0,0.523523743973798,3.52938892818609,2.04913645487534,2.42755176515577,0.251793635951155,0.405507724878058,0,0,0.218025156380447,0.219686182734472,0,0,0,0.335565212115473,0.725362142011344,1.34437519656986,0,0.286533439938757,0.515672092277442,2.63011399117477,2.11596391708813,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,1.14058573539325,1.62007125998029,1.26194976810829,0.571301968807607,0.220868540951614,0.979926393719632,1.34183659425531,1.83843757322004,0,0.893811366596314,1.53606533256243,1.05509030184155,1.46380229763855,1.04182674111352,0.279182999001381,0,0.916789486660861,2.06240009831567,1.42371680799103,1.67759501242771,0,0,0.869593466105033,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,0.281686839553361,1.28326477414318,0,0,0,0.253359865475099,0,0.22836775943812,1.29468941823586,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,1.46390398505774,0.628340120440365,0,0.599075622529601,0.599902730993408,0,0.748953197024114,1.83000241127451,1.63350657746724,0.869121600961382,1.27857728665165,1.24672826735736,0.486723789203273,0.407357455401265,0.497627882440372,0,0.210441855886474,0,0.229902104433473,0.720248519221397,0.753524089178575,0.476255494059295,1.0249097622788,0.655912071918102,0,0.431135985865684,0.567318240503458,0.879755620819744,0.219195732427575,0,0.696504333044333,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0.493679549740441,0.656669856316381,0.324275238183423,0.146199987425332,0,0.134206418760372,1.05144974282064,1.02904612379284,0,0,0,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0.648414149624083,0,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.280543279561274,0.252946148497029,0.295220295959204,0.156998727841375,0,0,0.500535317148282,0,0,1.21716072833102,0.241177159752417,0,1.15078454980324,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0.814824882210129,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0.481651769963376,0.820481806145422,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.857348140126369,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,1.15420377059036,0.161464426695906,0.120625849856312,0,0.328281799490123,0.291480836629851,0,0.854354403989263,0.412773735926445,0.925972636848558,0.565105371014073,0.546776910884101,0.457556346413045,0,0.419854356970974,0.552799895217695,0,0.632671987162271,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,17.4744810992099,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.13020438484395,0.209718688851422,1.93267296660805,5.76060012515731,0.316011120628178,0.405450430580328,0.308132871494482,0.649604114888975,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.807731599585181,0.15241361331,0.504130925684203,0.292373642219257,0.288635524920988,0.350630706544707,0.226730383615211,0,0.269141569828427,0,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,1.12950368523413,1.38097570952153,1.14579102687879,0.859265911718438,2.05524755931193,1.5107877947794,1.35004500046361,1.80128481289688,1.81256963593682,3.62432218226274,0.415149390336707,1.19707462020309,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.448176066834085,0.402048282689293,0.476293691283074,0.115884325944855,0.578727661391115,0,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0.192906610981141,1.24905288968973,0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|phase1_expression=0.640595388419176,0,0.454999239389536,0.60492842261366,0,0.33575854382378,0.467225281191051,0.774739940649458,0.422366166455,1.17032263160997,0.34243593645101,0.0797721589953364,1.71200729931206,0.524522414513984,0.666219523631325,0.202475267389826,1.39912375625629,0.315462165358238,0.548457734422955,0.84877930359606,2.89147186513637,0.297872853602656,0.261199789138935,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0.204169356262369,2.09265815368454,0,0.523523743973798,3.52938892818609,2.04913645487534,2.42755176515577,0.251793635951155,0.405507724878058,0,0,0.218025156380447,0.219686182734472,0,0,0,0.335565212115473,0.725362142011344,1.34437519656986,0,0.286533439938757,0.515672092277442,2.63011399117477,2.11596391708813,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,1.14058573539325,1.62007125998029,1.26194976810829,0.571301968807607,0.220868540951614,0.979926393719632,1.34183659425531,1.83843757322004,0,0.893811366596314,1.53606533256243,1.05509030184155,1.46380229763855,1.04182674111352,0.279182999001381,0,0.916789486660861,2.06240009831567,1.42371680799103,1.67759501242771,0,0,0.869593466105033,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,0.281686839553361,1.28326477414318,0,0,0,0.253359865475099,0,0.22836775943812,1.29468941823586,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,1.46390398505774,0.628340120440365,0,0.599075622529601,0.599902730993408,0,0.748953197024114,1.83000241127451,1.63350657746724,0.869121600961382,1.27857728665165,1.24672826735736,0.486723789203273,0.407357455401265,0.497627882440372,0,0.210441855886474,0,0.229902104433473,0.720248519221397,0.753524089178575,0.476255494059295,1.0249097622788,0.655912071918102,0,0.431135985865684,0.567318240503458,0.879755620819744,0.219195732427575,0,0.696504333044333,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0.493679549740441,0.656669856316381,0.324275238183423,0.146199987425332,0,0.134206418760372,1.05144974282064,1.02904612379284,0,0,0,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0.648414149624083,0,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.280543279561274,0.252946148497029,0.295220295959204,0.156998727841375,0,0,0.500535317148282,0,0,1.21716072833102,0.241177159752417,0,1.15078454980324,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0.814824882210129,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0.481651769963376,0.820481806145422,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.857348140126369,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,1.15420377059036,0.161464426695906,0.120625849856312,0,0.328281799490123,0.291480836629851,0,0.854354403989263,0.412773735926445,0.925972636848558,0.565105371014073,0.546776910884101,0.457556346413045,0,0.419854356970974,0.552799895217695,0,0.632671987162271,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,17.4744810992099,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.13020438484395,0.209718688851422,1.93267296660805,5.76060012515731,0.316011120628178,0.405450430580328,0.308132871494482,0.649604114888975,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.807731599585181,0.15241361331,0.504130925684203,0.292373642219257,0.288635524920988,0.350630706544707,0.226730383615211,0,0.269141569828427,0,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,1.12950368523413,1.38097570952153,1.14579102687879,0.859265911718438,2.05524755931193,1.5107877947794,1.35004500046361,1.80128481289688,1.81256963593682,3.62432218226274,0.415149390336707,1.19707462020309,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.448176066834085,0.402048282689293,0.476293691283074,0.115884325944855,0.578727661391115,0,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0.192906610981141,1.24905288968973,0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|short_description=p9@Prrc2a
}}
}}

Latest revision as of 09:40, 26 September 2015

Short description:p9@Prrc2a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Prrc2a_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -116bp_to_ENSMUST00000025253_5end
EntrezGene:Prrc2a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Prrc2a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.60e-1123
neuroblast (sensu Vertebrata)1.60e-1123
neuron5.22e-0733
neuronal stem cell5.22e-0733
neuroblast5.22e-0733
electrically signaling cell5.22e-0733
neuron of cerebral cortex8.87e-076

Uber anatomy
Ontology termp-valuen
gray matter1.14e-2234
brain grey matter3.74e-2029
regional part of telencephalon3.74e-2029
telencephalon3.74e-2029
cerebral cortex1.16e-1621
cerebral hemisphere1.16e-1621
pallium1.16e-1621
regional part of nervous system5.72e-1654
neural tube2.63e-1552
neural rod2.63e-1552
future spinal cord2.63e-1552
neural keel2.63e-1552
regional part of forebrain4.80e-1539
forebrain4.80e-1539
future forebrain4.80e-1539
anterior neural tube1.59e-1440
regional part of cerebral cortex5.16e-1417
regional part of brain2.70e-1346
brain6.93e-1347
future brain6.93e-1347
occipital lobe9.25e-1310
visual cortex9.25e-1310
neocortex9.25e-1310
central nervous system2.27e-1273
neurectoderm3.64e-1264
neural plate3.64e-1264
presumptive neural plate3.64e-1264
pre-chordal neural plate6.48e-1249
nervous system7.69e-1275
ecto-epithelium9.38e-1173
ectoderm-derived structure2.67e-0995
ectoderm2.67e-0995
presumptive ectoderm2.67e-0995
corpus striatum4.42e-085
striatum4.42e-085
ventral part of telencephalon4.42e-085
future corpus striatum4.42e-085
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