FFCP PHASE1:Mm9::chr19:26825444..26825457,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:26825444..26825457,+
|short_description=p@chr19:26825444..26825457,+
|description=CAGE_peak_at_chr19:26825444..26825457,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:26825444..26825457,+ | |||
|description=CAGE_peak_at_chr19:26825444..26825457,+ | |||
|id=chr19:26825444..26825457,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.87e-18,23;CL:0000337,5.87e-18,23;CL:0002613,2.97e-14,3;CL:0000540,4.58e-12,33;CL:0000047,4.58e-12,33;CL:0000031,4.58e-12,33;CL:0000404,4.58e-12,33;CL:0000393,5.61e-10,39;CL:0000211,5.61e-10,39;CL:0002319,6.59e-09,43;CL:0000221,1.14e-08,44;CL:0000133,1.14e-08,44;CL:0000120,3.71e-07,3;CL:0002609,4.78e-07,6;CL:0002608,8.98e-07,3;CL:0002612,9.60e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!8.45e-09!49;UBERON:0001049!3.98e-08!52;UBERON:0005068!3.98e-08!52;UBERON:0006241!3.98e-08!52;UBERON:0007135!3.98e-08!52;UBERON:0000033!6.64e-08!63;UBERON:0003080!6.82e-08!40;UBERON:0002346!9.96e-08!71;UBERON:0003075!9.96e-08!71;UBERON:0007284!9.96e-08!71;UBERON:0002780!1.39e-07!39;UBERON:0001890!1.39e-07!39;UBERON:0006240!1.39e-07!39;UBERON:0000955!3.23e-07!50;UBERON:0006238!3.23e-07!50;UBERON:0002616!9.08e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.52e-17,34;UBERON:0000369,4.36e-15,5;UBERON:0002435,4.36e-15,5;UBERON:0000204,4.36e-15,5;UBERON:0010082,4.36e-15,5;UBERON:0002780,9.00e-15,39;UBERON:0001890,9.00e-15,39;UBERON:0006240,9.00e-15,39;UBERON:0001049,1.06e-14,52;UBERON:0005068,1.06e-14,52;UBERON:0006241,1.06e-14,52;UBERON:0007135,1.06e-14,52;UBERON:0003080,2.35e-14,40;UBERON:0003528,3.83e-14,29;UBERON:0002791,3.83e-14,29;UBERON:0001893,3.83e-14,29;UBERON:0000073,4.49e-14,54;UBERON:0003056,1.88e-13,49;UBERON:0002346,2.17e-13,64;UBERON:0003075,2.17e-13,64;UBERON:0007284,2.17e-13,64;UBERON:0001017,2.42e-13,73;UBERON:0001016,6.45e-13,75;UBERON:0002616,3.14e-12,46;UBERON:0000955,6.29e-12,47;UBERON:0006238,6.29e-12,47;UBERON:0010371,1.95e-11,73;UBERON:0004121,4.20e-11,95;UBERON:0000924,4.20e-11,95;UBERON:0006601,4.20e-11,95;UBERON:0001954,1.79e-10,7;UBERON:0003022,1.79e-10,7;UBERON:0002421,1.79e-10,7;UBERON:0000349,1.79e-10,7;UBERON:0002600,1.79e-10,7;UBERON:0002420,1.74e-09,8;UBERON:0007245,1.74e-09,8;UBERON:0010009,1.74e-09,8;UBERON:0010011,1.74e-09,8;UBERON:0000454,1.74e-09,8;UBERON:0010314,1.47e-08,92;UBERON:0000956,3.23e-07,21;UBERON:0001869,3.23e-07,21;UBERON:0000203,3.23e-07,21;UBERON:0004111,9.06e-07,122;UBERON:0002257,9.60e-07,3 | |||
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| ||
|short_description=p@chr19:26825444..26825457,+ | |||
}} | }} |
Latest revision as of 20:02, 3 August 2015
Short description: | p@chr19:26825444..26825457, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:26825444..26825457, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.87e-18 | 23 |
neuroblast (sensu Vertebrata) | 5.87e-18 | 23 |
striatum neuron | 2.97e-14 | 3 |
neuron | 4.58e-12 | 33 |
neuronal stem cell | 4.58e-12 | 33 |
neuroblast | 4.58e-12 | 33 |
electrically signaling cell | 4.58e-12 | 33 |
electrically responsive cell | 5.61e-10 | 39 |
electrically active cell | 5.61e-10 | 39 |
neural cell | 6.59e-09 | 43 |
ectodermal cell | 1.14e-08 | 44 |
neurectodermal cell | 1.14e-08 | 44 |
granule cell | 3.71e-07 | 3 |
neuron of cerebral cortex | 4.78e-07 | 6 |
hippocampal neuron | 8.98e-07 | 3 |
neuron of the ventral spinal cord | 9.60e-07 | 3 |