FFCP PHASE1:Mm9::chr19:6057925..6057958,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:6057925..6057958,+
|short_description=p1@Fau
|description=CAGE_peak_1_at_Fau_5end
|association_with_transcript=-8bp_to_NM_001190436,uc008ggu.2_5end
|Entr...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14109 | |EntrezGene=14109 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt=P35545,Q642K5 | |UniProt=P35545,Q642K5 | ||
|association_with_transcript=-8bp_to_NM_001190436,uc008ggu.2_5end | |||
|cluster_id=chr19:6057925..6057958,+ | |||
|description=CAGE_peak_1_at_Fau_5end | |||
|id=chr19:6057925..6057958,+ | |||
|ontology_enrichment_celltype=CL:0000144!7.09e-31!121;CL:0000012!7.09e-31!121;CL:0002371!2.42e-29!118;CL:0000063!3.41e-28!66;CL:0000548!1.83e-27!115;CL:0000004!1.83e-27!115;CL:0000255!1.83e-27!115;CL:0000219!2.51e-23!54;CL:0000034!1.07e-20!97;CL:0002320!1.39e-20!46;CL:0000134!1.39e-20!46;CL:0000723!2.88e-18!91;CL:0000048!2.88e-18!91;CL:0000988!2.29e-17!32;CL:0002032!2.29e-17!32;CL:0000037!2.29e-17!32;CL:0000566!2.29e-17!32;CL:0000837!2.29e-17!32;CL:0002031!2.35e-14!25;CL:0000049!2.61e-10!19;CL:0000738!1.17e-09!17;CL:0002087!1.17e-09!17;CL:0000763!1.05e-08!16;CL:0000838!2.49e-08!12;CL:0000542!3.61e-08!13;CL:0000051!3.61e-08!13;CL:0000084!1.21e-07!11;CL:0000827!1.21e-07!11;CL:0000839!2.31e-07!13;CL:0000066!5.18e-07!25;CL:0000791!6.80e-07!9;CL:0000789!6.80e-07!9;CL:0002420!6.80e-07!9;CL:0002419!6.80e-07!9;CL:0000790!6.80e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.51e-23,54;CL:0000034,1.07e-20,97;CL:0002320,1.39e-20,46;CL:0000134,1.39e-20,46;CL:0000723,2.88e-18,91;CL:0000048,2.88e-18,91;CL:0000988,2.29e-17,32;CL:0002032,2.29e-17,32;CL:0000037,2.29e-17,32;CL:0000837,2.29e-17,32;CL:0002031,2.35e-14,25;CL:0000049,2.61e-10,19;CL:0000738,1.17e-09,17;CL:0002087,1.17e-09,17;CL:0000763,1.05e-08,16;CL:0000838,2.49e-08,12;CL:0000542,3.61e-08,13;CL:0000051,3.61e-08,13;CL:0000084,1.21e-07,11;CL:0000827,1.21e-07,11;CL:0000839,2.31e-07,13;CL:0000066,5.18e-07,25;CL:0000791,6.80e-07,9;CL:0000789,6.80e-07,9;CL:0002420,6.80e-07,9;CL:0002419,6.80e-07,9;CL:0000790,6.80e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.39e-20!46;UBERON:0002371!1.22e-08!16;UBERON:0000344!3.67e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.39e-20,46;UBERON:0002371,1.22e-08,16;UBERON:0000344,3.67e-07,15 | |||
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| ||
|short_description=p1@Fau | |||
}} | }} |
Latest revision as of 02:18, 26 September 2015
Short description: | p1@Fau |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fau_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | -8bp_to_NM_001190436, uc008ggu.2_5end |
EntrezGene: | Fau |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.51e-23 | 54 |
stem cell | 1.07e-20 | 97 |
connective tissue cell | 1.39e-20 | 46 |
mesenchymal cell | 1.39e-20 | 46 |
somatic stem cell | 2.88e-18 | 91 |
multi fate stem cell | 2.88e-18 | 91 |
hematopoietic cell | 2.29e-17 | 32 |
hematopoietic oligopotent progenitor cell | 2.29e-17 | 32 |
hematopoietic stem cell | 2.29e-17 | 32 |
hematopoietic multipotent progenitor cell | 2.29e-17 | 32 |
hematopoietic lineage restricted progenitor cell | 2.35e-14 | 25 |
common myeloid progenitor | 2.61e-10 | 19 |
leukocyte | 1.17e-09 | 17 |
nongranular leukocyte | 1.17e-09 | 17 |
myeloid cell | 1.05e-08 | 16 |
lymphoid lineage restricted progenitor cell | 2.49e-08 | 12 |
lymphocyte | 3.61e-08 | 13 |
common lymphoid progenitor | 3.61e-08 | 13 |
T cell | 1.21e-07 | 11 |
pro-T cell | 1.21e-07 | 11 |
myeloid lineage restricted progenitor cell | 2.31e-07 | 13 |
epithelial cell | 5.18e-07 | 25 |
mature alpha-beta T cell | 6.80e-07 | 9 |
alpha-beta T cell | 6.80e-07 | 9 |
immature T cell | 6.80e-07 | 9 |
mature T cell | 6.80e-07 | 9 |
immature alpha-beta T cell | 6.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.39e-20 | 46 |
bone marrow | 1.22e-08 | 16 |
mucosa | 3.67e-07 | 15 |