FFCP PHASE1:Mm9::chr1:179188313..179188345,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:179188313..179188345,-
|short_description=p2@Akt3
|description=CAGE_peak_2_at_Akt3_5end
|association_with_transcript=0bp_to_ENSMUST00000111159_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=23797 | |EntrezGene=23797 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3253 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WUA6 | |UniProt=Q9WUA6 | ||
|association_with_transcript=0bp_to_ENSMUST00000111159_5end | |||
|cluster_id=chr1:179188313..179188345,- | |||
|description=CAGE_peak_2_at_Akt3_5end | |||
|id=chr1:179188313..179188345,- | |||
|ontology_enrichment_celltype=CL:0000540!1.68e-16!33;CL:0000047!1.68e-16!33;CL:0000031!1.68e-16!33;CL:0000404!1.68e-16!33;CL:0000117!1.03e-12!23;CL:0000337!1.03e-12!23;CL:0000393!3.68e-12!39;CL:0000211!3.68e-12!39;CL:0002319!4.71e-10!43;CL:0000221!5.63e-10!44;CL:0000133!5.63e-10!44;CL:0000055!5.61e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.00e-18,33;CL:0000047,4.00e-18,33;CL:0000031,4.00e-18,33;CL:0000404,4.00e-18,33;CL:0000117,6.32e-14,23;CL:0000337,6.32e-14,23;CL:0000393,1.38e-13,39;CL:0000211,1.38e-13,39;CL:0002319,6.55e-11,43;CL:0000221,7.95e-11,44;CL:0000133,7.95e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.41e-24!73;UBERON:0005743!8.41e-24!73;UBERON:0000073!2.53e-22!75;UBERON:0001016!2.53e-22!75;UBERON:0002346!4.91e-21!71;UBERON:0003075!4.91e-21!71;UBERON:0007284!4.91e-21!71;UBERON:0000033!1.58e-19!63;UBERON:0004121!6.84e-19!102;UBERON:0000924!6.84e-19!102;UBERON:0006601!6.84e-19!102;UBERON:0003056!1.70e-18!49;UBERON:0001049!7.67e-18!52;UBERON:0005068!7.67e-18!52;UBERON:0006241!7.67e-18!52;UBERON:0007135!7.67e-18!52;UBERON:0000955!1.15e-17!50;UBERON:0006238!1.15e-17!50;UBERON:0002616!4.14e-17!49;UBERON:0003080!2.88e-15!40;UBERON:0002020!4.75e-15!34;UBERON:0002780!1.20e-14!39;UBERON:0001890!1.20e-14!39;UBERON:0006240!1.20e-14!39;UBERON:0002791!7.07e-13!29;UBERON:0003528!7.07e-13!29;UBERON:0001893!7.07e-13!29;UBERON:0000153!2.32e-11!94;UBERON:0007811!8.04e-10!86;UBERON:0000956!3.88e-09!21;UBERON:0001869!3.88e-09!21;UBERON:0000203!3.88e-09!21;UBERON:0002619!6.10e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.36e-26,73;UBERON:0002346,1.56e-24,64;UBERON:0003075,1.56e-24,64;UBERON:0007284,1.56e-24,64;UBERON:0001016,1.79e-24,75;UBERON:0004121,2.79e-22,95;UBERON:0000924,2.79e-22,95;UBERON:0006601,2.79e-22,95;UBERON:0000073,6.58e-21,54;UBERON:0010371,3.83e-20,73;UBERON:0003056,6.49e-20,49;UBERON:0001049,3.68e-19,52;UBERON:0005068,3.68e-19,52;UBERON:0006241,3.68e-19,52;UBERON:0007135,3.68e-19,52;UBERON:0000955,2.50e-17,47;UBERON:0006238,2.50e-17,47;UBERON:0002616,9.92e-17,46;UBERON:0003080,2.43e-16,40;UBERON:0002020,1.00e-15,34;UBERON:0002780,1.16e-15,39;UBERON:0001890,1.16e-15,39;UBERON:0006240,1.16e-15,39;UBERON:0010314,3.17e-15,92;UBERON:0003528,2.50e-13,29;UBERON:0002791,2.50e-13,29;UBERON:0001893,2.50e-13,29;UBERON:0000956,3.18e-09,21;UBERON:0001869,3.18e-09,21;UBERON:0000203,3.18e-09,21;UBERON:0002619,7.68e-07,17 | |||
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| ||
|short_description=p2@Akt3 | |||
}} | }} |
Latest revision as of 21:20, 26 September 2015
Short description: | p2@Akt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Akt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3253 |
Association with transcript: | 0bp_to_ENSMUST00000111159_5end |
EntrezGene: | Akt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.00e-18 | 33 |
neuronal stem cell | 4.00e-18 | 33 |
neuroblast | 4.00e-18 | 33 |
electrically signaling cell | 4.00e-18 | 33 |
CNS neuron (sensu Vertebrata) | 6.32e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.32e-14 | 23 |
electrically responsive cell | 1.38e-13 | 39 |
electrically active cell | 1.38e-13 | 39 |
neural cell | 6.55e-11 | 43 |
ectodermal cell | 7.95e-11 | 44 |
neurectodermal cell | 7.95e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.36e-26 | 73 |
neurectoderm | 1.56e-24 | 64 |
neural plate | 1.56e-24 | 64 |
presumptive neural plate | 1.56e-24 | 64 |
nervous system | 1.79e-24 | 75 |
ectoderm-derived structure | 2.79e-22 | 95 |
ectoderm | 2.79e-22 | 95 |
presumptive ectoderm | 2.79e-22 | 95 |
regional part of nervous system | 6.58e-21 | 54 |
ecto-epithelium | 3.83e-20 | 73 |
pre-chordal neural plate | 6.49e-20 | 49 |
neural tube | 3.68e-19 | 52 |
neural rod | 3.68e-19 | 52 |
future spinal cord | 3.68e-19 | 52 |
neural keel | 3.68e-19 | 52 |
brain | 2.50e-17 | 47 |
future brain | 2.50e-17 | 47 |
regional part of brain | 9.92e-17 | 46 |
anterior neural tube | 2.43e-16 | 40 |
gray matter | 1.00e-15 | 34 |
regional part of forebrain | 1.16e-15 | 39 |
forebrain | 1.16e-15 | 39 |
future forebrain | 1.16e-15 | 39 |
structure with developmental contribution from neural crest | 3.17e-15 | 92 |
brain grey matter | 2.50e-13 | 29 |
regional part of telencephalon | 2.50e-13 | 29 |
telencephalon | 2.50e-13 | 29 |
cerebral cortex | 3.18e-09 | 21 |
cerebral hemisphere | 3.18e-09 | 21 |
pallium | 3.18e-09 | 21 |
regional part of cerebral cortex | 7.68e-07 | 17 |