FFCP PHASE1:Mm9::chr2:32535786..32535820,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:32535786..32535820,+
|short_description=p@chr2:32535786..32535820,+
|description=CAGE_peak_at_chr2:32535786..32535820,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=487 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:32535786..32535820,+ | |||
|description=CAGE_peak_at_chr2:32535786..32535820,+ | |||
|id=chr2:32535786..32535820,+ | |||
|ontology_enrichment_celltype=CL:0000333!9.15e-08!10;CL:0000095!9.15e-08!10;CL:0000243!9.15e-08!10;CL:0000123!9.15e-08!10;CL:0000125!9.15e-08!10;CL:0000030!9.15e-08!10;CL:0000339!9.15e-08!10;CL:0002453!9.64e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.79e-17,10;CL:0000095,2.79e-17,10;CL:0000243,2.79e-17,10;CL:0000123,2.79e-17,10;CL:0000125,2.79e-17,10;CL:0000030,2.79e-17,10;CL:0000339,2.79e-17,10;CL:0002453,1.06e-14,8;CL:0000128,3.24e-11,6;CL:0000126,3.24e-11,6;CL:0000127,3.24e-11,6;CL:0000192,3.57e-07,3;CL:0000359,3.57e-07,3;CL:0002539,3.57e-07,3;CL:0000514,3.57e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.49e-10,10;UBERON:0000411,3.49e-10,10;UBERON:0001950,3.49e-10,10;UBERON:0002619,8.45e-09,17;UBERON:0002369,3.36e-08,7;UBERON:0006858,3.36e-08,7;UBERON:0003064,3.66e-08,14;UBERON:0000956,3.67e-08,21;UBERON:0001869,3.67e-08,21;UBERON:0000203,3.67e-08,21;UBERON:0001135,3.57e-07,3;UBERON:0004237,3.57e-07,3;UBERON:0004695,3.57e-07,3;UBERON:0002111,3.57e-07,3;UBERON:0004178,3.57e-07,3;UBERON:0001016,8.86e-07,75 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.893618560807968,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5896817975577,12.5707394712198,6.60768307782054,5.47673941043627,1.96222640742402,6.37089929929968,4.08302788055995,1.95980990275508,5.75010257459886,0,0,0,0.257259436035947,0.573066879877513,2.06268836910977,0,0,0,1.35537812827653,0.889294796111139,0,1.97773272513395,0,3.59520132622086,9.22123932771731,0,0,0,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,1.13589289999776,2.41828992341714,0.579728977403356,0,0,0,0,0,0,9.03280709663706,8.3131521472918,8.12681021373782,0,7.69958864485907,0,0,1.29894624606728,2.53359865475099,2.52762222507392,0.34255163915718,0,1.7813056687779,0.520455980298408,1.52232739156071,1.84492397804847,1.80867168663147,2.3517741427141,2.63899841792318,0.494389935468748,0.722996784599558,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0.457500602818626,0,1.91206752211504,1.53429274398198,0.20778804455956,0.324482526135515,0.916554274652847,0.497627882440372,0.505445516867349,0,0,0,0.360124259610698,0,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0.492502392237286,0,0.292399974850665,0,0.134206418760372,0.210289948564127,0,0,0,0.213288250535234,0,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,0,0.658795818896044,0.251335208800269,0.994782360205754,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0,0.147610147979602,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0,0,2.87536413054709,0,0,0.252578877947112,0,0.482443521363367,0.739012760666419,0.189491411770485,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0.159454768657487,0.491589944147214,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,0.481651769963376,0.586058432961016,3.93443868904021,0.757412781613119,1.89304931649754,0.780877488593277,0.646270193198397,1.67278158566786,0.891194696329576,0.283076530788832,0.809621403349789,0.876767573733936,0.790575555893047,1.28528526568723,0.99358059645788,0,0.325773918707152,0.824850614862677,0,0,0,0.188605079755898,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,1.03135543248187,0.340439605753788,0,0,0.214337035031592,0,0.535106452806212,0.164549020602121,0,0.704015124191131,0.63549621259146,0,0.49465875882444,0.807322133479528,0.0603129249281559,0.477489376012546,1.31312719796049,0,0.556275906031529,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0.627264888043406,0.655087691238533,0.404593039154462,0.661227645802687,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0,0.506868376472335,0.352071715937262,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0.906921534460845,1.55390167361845,1.79427713218951,1.00730769818447,2.51146472241848,0.375364950902364,0.549454872801795,2.14368379079066,1.00314420807073,1.12950368523413,0.460325236507177,0,1.3748254587495,2.05524755931193,4.5323633843382,2.70009000092722,1.80128481289688,3.62513927187364,4.14208249401456,0.103787347584177,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.468207537349412,0.192075457214608,0.34461281373368,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0.578719832943424,0.499621155875892,0.935726433781634,0.214871054048298,0.765153328275374,0,0.695603506861264 | ||
|short_description=p@chr2:32535786..32535820,+ | |||
}} | }} |
Latest revision as of 01:42, 5 August 2015
Short description: | p@chr2:32535786..32535820, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:32535786..32535820, + |
Coexpression cluster: | MCL_coexpression_mm9:487 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.79e-17 | 10 |
neuron associated cell | 2.79e-17 | 10 |
glial cell (sensu Vertebrata) | 2.79e-17 | 10 |
neuron associated cell (sensu Vertebrata) | 2.79e-17 | 10 |
glial cell | 2.79e-17 | 10 |
glioblast | 2.79e-17 | 10 |
glioblast (sensu Vertebrata) | 2.79e-17 | 10 |
oligodendrocyte precursor cell | 1.06e-14 | 8 |
oligodendrocyte | 3.24e-11 | 6 |
macroglial cell | 3.24e-11 | 6 |
astrocyte | 3.24e-11 | 6 |
smooth muscle cell | 3.57e-07 | 3 |
vascular associated smooth muscle cell | 3.57e-07 | 3 |
aortic smooth muscle cell | 3.57e-07 | 3 |
smooth muscle myoblast | 3.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.49e-10 | 10 |
visual cortex | 3.49e-10 | 10 |
neocortex | 3.49e-10 | 10 |
regional part of cerebral cortex | 8.45e-09 | 17 |
adrenal gland | 3.36e-08 | 7 |
adrenal/interrenal gland | 3.36e-08 | 7 |
intermediate mesoderm | 3.66e-08 | 14 |
cerebral cortex | 3.67e-08 | 21 |
cerebral hemisphere | 3.67e-08 | 21 |
pallium | 3.67e-08 | 21 |
smooth muscle tissue | 3.57e-07 | 3 |
blood vessel smooth muscle | 3.57e-07 | 3 |
arterial system smooth muscle | 3.57e-07 | 3 |
artery smooth muscle tissue | 3.57e-07 | 3 |
aorta smooth muscle tissue | 3.57e-07 | 3 |
nervous system | 8.86e-07 | 75 |