FFCP PHASE1:Mm9::chr3:106592965..106592990,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:106592965..106592990,-
|short_description=p1@Cd53
|description=CAGE_peak_1_at_Cd53_5end
|association_with_transcript=76bp_to_ENSMUST00000038845,NM_007651,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12508 | |EntrezGene=12508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=920 | |||
|TSSclassifier=NA | |||
|UniProt=Q61451,Q3TV80,Q3U0W1 | |UniProt=Q61451,Q3TV80,Q3U0W1 | ||
|association_with_transcript=76bp_to_ENSMUST00000038845,NM_007651,uc008qwm.2_5end | |||
|cluster_id=chr3:106592965..106592990,- | |||
|description=CAGE_peak_1_at_Cd53_5end | |||
|id=chr3:106592965..106592990,- | |||
|ontology_enrichment_celltype=CL:0000988!1.24e-11!32;CL:0002032!1.24e-11!32;CL:0000037!1.24e-11!32;CL:0000566!1.24e-11!32;CL:0000837!1.24e-11!32;CL:0000738!2.86e-09!17;CL:0002087!2.86e-09!17;CL:0002031!3.73e-09!25;CL:0000838!1.01e-08!12;CL:0000084!4.03e-08!11;CL:0000827!4.03e-08!11;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000791!3.38e-07!9;CL:0000789!3.38e-07!9;CL:0002420!3.38e-07!9;CL:0002419!3.38e-07!9;CL:0000790!3.38e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.21e-12,32;CL:0002032,7.21e-12,32;CL:0000037,7.21e-12,32;CL:0000837,7.21e-12,32;CL:0002031,2.24e-09,25;CL:0000738,2.68e-09,17;CL:0002087,2.68e-09,17;CL:0000838,9.47e-09,12;CL:0000084,3.82e-08,11;CL:0000827,3.82e-08,11;CL:0000542,1.21e-07,13;CL:0000051,1.21e-07,13;CL:0000791,3.22e-07,9;CL:0000789,3.22e-07,9;CL:0002420,3.22e-07,9;CL:0002419,3.22e-07,9;CL:0000790,3.22e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!9.62e-19!70;UBERON:0002193!3.01e-18!48;UBERON:0002390!1.14e-16!45;UBERON:0003061!1.14e-16!45;UBERON:0005057!9.98e-10!51;UBERON:0003081!1.01e-09!88;UBERON:0004177!5.91e-09!29;UBERON:0002371!7.00e-09!16;UBERON:0000926!1.68e-08!193;UBERON:0004120!1.68e-08!193;UBERON:0006603!1.68e-08!193;UBERON:0001474!3.33e-08!22;UBERON:0004765!3.33e-08!22;UBERON:0001434!3.33e-08!22;UBERON:0000077!3.68e-08!97;UBERON:0001041!7.50e-08!92;UBERON:0002204!1.15e-07!32;UBERON:0003104!8.82e-07!131;UBERON:0009142!8.82e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.60e-18,48;UBERON:0002405,1.60e-18,48;UBERON:0002390,6.21e-17,45;UBERON:0003061,6.21e-17,45;UBERON:0003081,3.14e-09,87;UBERON:0004177,3.68e-09,29;UBERON:0005057,3.68e-09,29;UBERON:0002371,6.57e-09,16;UBERON:0000077,2.47e-08,35;UBERON:0001041,2.68e-08,80;UBERON:0001474,2.71e-08,22;UBERON:0004765,2.71e-08,22;UBERON:0001434,2.71e-08,22;UBERON:0002204,1.25e-07,32;UBERON:0000926,5.03e-07,120;UBERON:0004120,5.03e-07,120;UBERON:0006603,5.03e-07,120;UBERON:0003408,7.00e-07,24 | |||
|phase1_expression=3.20297694209588,0.348975407639361,0,0,0,0.16787927191189,0,494.80057542812,1055.35226124889,1000.3917855002,1103.32858724515,760.148903066561,612.385010963923,587.989626670177,47.3015861778241,92.7336724645403,33.578970150151,400.479218922283,380.629667689531,333.145876661454,10.8855411393369,98.0001688352738,106.569513968686,63.5169918489824,67.9051471958823,0.57423196411502,0,0.646413698057667,3.6104449696711,4.03248207615889,7.76056787293567,0,0,0,0,0.332469290716985,0,1452.72329028781,1047.77069700642,1284.7272677117,1758.81214921273,1480.15956590495,1221.54404822638,0.881277725829041,1.21652317463417,1.28482726513177,0,0,0,0.194429899074283,1.1198913730029,0,502.173339930805,669.509257076471,645.300094353531,3.60163210450326,12.8940047972441,12.3761302146586,0.606949382578793,3.1739458756322,0,0,0,130.485459005803,152.285419835314,96.6252956326696,57.2236211090153,14.2160772968975,0.414758449233911,0.540023753326763,1.26194976810829,2.28520787523043,3.75476519617743,0.734944795289724,0.479227355091182,0.919218786610021,7.70811166995721,4.34136949489638,6.45147439676223,1.05509030184155,0.731901148819277,1.04182674111352,5.30447698102624,8.4414391504752,6.1119299110724,4.12480019663135,4.9830088279686,0.745597783301202,9.99585751998029,1.20914496170857,1.15945795480671,15.487629785665,0,1.07940638327563,3.89865850468601,1.79210754838934,27.1057730854281,0,0,0,0,0,0,0,0.216491041011214,0,0,20.4389144697117,412.488048649945,30.2821963692243,2.94925055502431,4.26251669636998,2.99800146432876,6.33035090321015,6.34979018532806,3.64433114856059,2.71914464507811,27.1846791009434,107.922487337885,13.1031148457401,34.0095938429006,36.8505192382769,16.775258509631,2.63502717310392,2.09446706813455,17.3710797541842,445.592448037517,287.953310876836,508.407978519332,4.79330046095433,8.6925114535539,1.00523481690292,6.77914848749878,6.39288643325826,8.51930982694196,5.84068547043927,5.90668310331835,65.3136595702988,8.33985102831127,7.57590681191306,1.69156575851515,0.689706313300419,1.80062129805349,3.31550599238573,1.56483948048054,1.66547836370305,2.71735001223214,2.32833033665114,0.862271971731369,1.89106080167819,1.05570674498369,4.16471891612392,5.83899223373756,8.70630416305416,8.43706759272568,2.9855140022774,305.462736481257,213.598762905214,364.581769724545,1.24275463521301,0.469052119962192,1.98068267607116,3.07768156260773,3.14822770795846,2.1597395804233,1.62773761325285,4.29237442239391,3.15266424391358,2.13927804887525,4.76085645829376,5.59374785866405,7.89479932096795,20.1986106067767,9.93127498826751,5.88811855979556,2.46971069710283,8.59088835757875,4.23120906661671,2.13288250535234,2.55460339046482,3.47942145569652,4.63872106633688,3.33567065767305,4.94586627892654,7.59246498471219,4.94096864172033,6.28338022000674,9.54991065797524,7.79856348476481,10.7858329038507,7.13255564586491,7.56736838366595,0.948339504765408,1.94222471436539,5.63538678365402,0.610953983535943,0.969762435838129,1.47285221769669,2.84564417059158,2.80459281161244,4.70996183524124,3.20832626196681,15.7119892356189,6.67380422864376,10.2210677458866,15.0657615297852,22.9231937169008,29.9059678092997,33.8652382869288,36.537409456253,40.8580771473089,17.2973690308491,50.3188722845741,40.1912223481984,20.2824487524464,10.6083128737787,11.1226396383586,14.9557491622644,67.8044207911439,2.27389694124582,3.25929952884052,3.73439188705414,3.75504397261603,7.37027532743989,11.4260947625287,9.36641509717434,19.7043930132739,19.4888926890922,10.3645599627367,42.7683251408076,50.5966996867074,43.1054194572905,465.945067372351,369.311959312904,26.0635064700089,20.9711927191597,6.42202359951168,5.15731421005694,0,10.0988370881749,0,0.780877488593277,0,0,0.222798674082394,0,0,0,0,3.21321316421807,12.9165477539524,4.45164009168138,4.72372182125371,19.7964147567043,11.9470624505967,2.91336763385978,2.72091201268276,4.52652191414155,1.47650946440386,6.45613810682248,7.23599220871019,14.1778154496227,10.3384239731569,12.009396801561,7.37930260024991,6.18813259489121,3.40439605753788,1.98067203434441,1.68166288917581,1.92903331528433,3.72414490648775,4.63758925765383,3.1264313914403,3.65357938937519,11.0295702789944,4.66030555900404,4.19003956304428,13.0260139823769,15.339120536111,7.11692514152239,6.08798954415996,4.43180429311665,6.70405924248657,10.9400928186201,126.273580909613,48.5009139713573,61.4845830867443,64.610380752609,94.1823228997863,100.891174384076,370.722955816598,384.166736628441,359.734531812915,6.68269432610579,2.84702394223022,5.08298667817122,3.34816556547584,2.50905955217362,5.8957892211468,4.85511646985355,6.61227645802687,9.42321391142507,6.99920855775682,27.3389297758247,0.56369293868419,1.64468200648377,0.827292452285488,1.36115831840833,4.39143399824286,3.54807863530634,3.40335992072686,1.8228613878153,2.9360616439199,2.17425708743405,1.72818003754719,74.2626133476219,24.5297510501099,32.2512405497558,30.6613142227596,23.0944437411051,32.5837421841274,47.2368116613478,47.7037172773884,32.915062683096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| |phase1_expression=3.20297694209588,0.348975407639361,0,0,0,0.16787927191189,0,494.80057542812,1055.35226124889,1000.3917855002,1103.32858724515,760.148903066561,612.385010963923,587.989626670177,47.3015861778241,92.7336724645403,33.578970150151,400.479218922283,380.629667689531,333.145876661454,10.8855411393369,98.0001688352738,106.569513968686,63.5169918489824,67.9051471958823,0.57423196411502,0,0.646413698057667,3.6104449696711,4.03248207615889,7.76056787293567,0,0,0,0,0.332469290716985,0,1452.72329028781,1047.77069700642,1284.7272677117,1758.81214921273,1480.15956590495,1221.54404822638,0.881277725829041,1.21652317463417,1.28482726513177,0,0,0,0.194429899074283,1.1198913730029,0,502.173339930805,669.509257076471,645.300094353531,3.60163210450326,12.8940047972441,12.3761302146586,0.606949382578793,3.1739458756322,0,0,0,130.485459005803,152.285419835314,96.6252956326696,57.2236211090153,14.2160772968975,0.414758449233911,0.540023753326763,1.26194976810829,2.28520787523043,3.75476519617743,0.734944795289724,0.479227355091182,0.919218786610021,7.70811166995721,4.34136949489638,6.45147439676223,1.05509030184155,0.731901148819277,1.04182674111352,5.30447698102624,8.4414391504752,6.1119299110724,4.12480019663135,4.9830088279686,0.745597783301202,9.99585751998029,1.20914496170857,1.15945795480671,15.487629785665,0,1.07940638327563,3.89865850468601,1.79210754838934,27.1057730854281,0,0,0,0,0,0,0,0.216491041011214,0,0,20.4389144697117,412.488048649945,30.2821963692243,2.94925055502431,4.26251669636998,2.99800146432876,6.33035090321015,6.34979018532806,3.64433114856059,2.71914464507811,27.1846791009434,107.922487337885,13.1031148457401,34.0095938429006,36.8505192382769,16.775258509631,2.63502717310392,2.09446706813455,17.3710797541842,445.592448037517,287.953310876836,508.407978519332,4.79330046095433,8.6925114535539,1.00523481690292,6.77914848749878,6.39288643325826,8.51930982694196,5.84068547043927,5.90668310331835,65.3136595702988,8.33985102831127,7.57590681191306,1.69156575851515,0.689706313300419,1.80062129805349,3.31550599238573,1.56483948048054,1.66547836370305,2.71735001223214,2.32833033665114,0.862271971731369,1.89106080167819,1.05570674498369,4.16471891612392,5.83899223373756,8.70630416305416,8.43706759272568,2.9855140022774,305.462736481257,213.598762905214,364.581769724545,1.24275463521301,0.469052119962192,1.98068267607116,3.07768156260773,3.14822770795846,2.1597395804233,1.62773761325285,4.29237442239391,3.15266424391358,2.13927804887525,4.76085645829376,5.59374785866405,7.89479932096795,20.1986106067767,9.93127498826751,5.88811855979556,2.46971069710283,8.59088835757875,4.23120906661671,2.13288250535234,2.55460339046482,3.47942145569652,4.63872106633688,3.33567065767305,4.94586627892654,7.59246498471219,4.94096864172033,6.28338022000674,9.54991065797524,7.79856348476481,10.7858329038507,7.13255564586491,7.56736838366595,0.948339504765408,1.94222471436539,5.63538678365402,0.610953983535943,0.969762435838129,1.47285221769669,2.84564417059158,2.80459281161244,4.70996183524124,3.20832626196681,15.7119892356189,6.67380422864376,10.2210677458866,15.0657615297852,22.9231937169008,29.9059678092997,33.8652382869288,36.537409456253,40.8580771473089,17.2973690308491,50.3188722845741,40.1912223481984,20.2824487524464,10.6083128737787,11.1226396383586,14.9557491622644,67.8044207911439,2.27389694124582,3.25929952884052,3.73439188705414,3.75504397261603,7.37027532743989,11.4260947625287,9.36641509717434,19.7043930132739,19.4888926890922,10.3645599627367,42.7683251408076,50.5966996867074,43.1054194572905,465.945067372351,369.311959312904,26.0635064700089,20.9711927191597,6.42202359951168,5.15731421005694,0,10.0988370881749,0,0.780877488593277,0,0,0.222798674082394,0,0,0,0,3.21321316421807,12.9165477539524,4.45164009168138,4.72372182125371,19.7964147567043,11.9470624505967,2.91336763385978,2.72091201268276,4.52652191414155,1.47650946440386,6.45613810682248,7.23599220871019,14.1778154496227,10.3384239731569,12.009396801561,7.37930260024991,6.18813259489121,3.40439605753788,1.98067203434441,1.68166288917581,1.92903331528433,3.72414490648775,4.63758925765383,3.1264313914403,3.65357938937519,11.0295702789944,4.66030555900404,4.19003956304428,13.0260139823769,15.339120536111,7.11692514152239,6.08798954415996,4.43180429311665,6.70405924248657,10.9400928186201,126.273580909613,48.5009139713573,61.4845830867443,64.610380752609,94.1823228997863,100.891174384076,370.722955816598,384.166736628441,359.734531812915,6.68269432610579,2.84702394223022,5.08298667817122,3.34816556547584,2.50905955217362,5.8957892211468,4.85511646985355,6.61227645802687,9.42321391142507,6.99920855775682,27.3389297758247,0.56369293868419,1.64468200648377,0.827292452285488,1.36115831840833,4.39143399824286,3.54807863530634,3.40335992072686,1.8228613878153,2.9360616439199,2.17425708743405,1.72818003754719,74.2626133476219,24.5297510501099,32.2512405497558,30.6613142227596,23.0944437411051,32.5837421841274,47.2368116613478,47.7037172773884,32.915062683096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| ||
|short_description=p1@Cd53 | |||
}} | }} |
Latest revision as of 06:33, 27 September 2015
Short description: | p1@Cd53 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cd53_5end |
Coexpression cluster: | MCL_coexpression_mm9:920 |
Association with transcript: | 76bp_to_ENSMUST00000038845, NM_007651, uc008qwm.2_5end |
EntrezGene: | Cd53 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.21e-12 | 32 |
hematopoietic oligopotent progenitor cell | 7.21e-12 | 32 |
hematopoietic stem cell | 7.21e-12 | 32 |
hematopoietic multipotent progenitor cell | 7.21e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 2.24e-09 | 25 |
leukocyte | 2.68e-09 | 17 |
nongranular leukocyte | 2.68e-09 | 17 |
lymphoid lineage restricted progenitor cell | 9.47e-09 | 12 |
T cell | 3.82e-08 | 11 |
pro-T cell | 3.82e-08 | 11 |
lymphocyte | 1.21e-07 | 13 |
common lymphoid progenitor | 1.21e-07 | 13 |
mature alpha-beta T cell | 3.22e-07 | 9 |
alpha-beta T cell | 3.22e-07 | 9 |
immature T cell | 3.22e-07 | 9 |
mature T cell | 3.22e-07 | 9 |
immature alpha-beta T cell | 3.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.60e-18 | 48 |
immune system | 1.60e-18 | 48 |
hematopoietic system | 6.21e-17 | 45 |
blood island | 6.21e-17 | 45 |
lateral plate mesoderm | 3.14e-09 | 87 |
hemopoietic organ | 3.68e-09 | 29 |
immune organ | 3.68e-09 | 29 |
bone marrow | 6.57e-09 | 16 |
mixed endoderm/mesoderm-derived structure | 2.47e-08 | 35 |
foregut | 2.68e-08 | 80 |
bone element | 2.71e-08 | 22 |
skeletal element | 2.71e-08 | 22 |
skeletal system | 2.71e-08 | 22 |
musculoskeletal system | 1.25e-07 | 32 |
mesoderm | 5.03e-07 | 120 |
mesoderm-derived structure | 5.03e-07 | 120 |
presumptive mesoderm | 5.03e-07 | 120 |
gland of gut | 7.00e-07 | 24 |