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FFCP PHASE1:Mm9::chr3:26230422..26230436,-: Difference between revisions

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(Created page with "{{FFCP |id=chr3:26230422..26230436,- |short_description=p3@Nlgn1 |description=CAGE_peak_3_at_Nlgn1_5end |association_with_transcript=394bp_to_NM_138666,uc008otc.1,uc008otd...")
 
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{{FFCP
{{FFCP
|id=chr3:26230422..26230436,-
|DHSsupport=NA
|short_description=p3@Nlgn1
|DPIdataset=NA
|description=CAGE_peak_3_at_Nlgn1_5end
|association_with_transcript=394bp_to_NM_138666,uc008otc.1,uc008otd.1_5end
|EntrezGene=192167
|EntrezGene=192167
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q99K10
|UniProt=Q99K10
|association_with_transcript=394bp_to_NM_138666,uc008otc.1,uc008otd.1_5end
|cluster_id=chr3:26230422..26230436,-
|description=CAGE_peak_3_at_Nlgn1_5end
|id=chr3:26230422..26230436,-
|ontology_enrichment_celltype=CL:0000117!3.00e-11!23;CL:0000337!3.00e-11!23;CL:0000540!8.06e-07!33;CL:0000047!8.06e-07!33;CL:0000031!8.06e-07!33;CL:0000404!8.06e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,9.85e-12,23;CL:0000337,9.85e-12,23;CL:0000540,2.44e-07,33;CL:0000047,2.44e-07,33;CL:0000031,2.44e-07,33;CL:0000404,2.44e-07,33;CL:0002610,6.14e-07,3;CL:0002614,8.94e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.26e-22!63;UBERON:0001049!5.68e-22!52;UBERON:0005068!5.68e-22!52;UBERON:0006241!5.68e-22!52;UBERON:0007135!5.68e-22!52;UBERON:0000955!8.37e-21!50;UBERON:0006238!8.37e-21!50;UBERON:0002346!2.83e-20!71;UBERON:0003075!2.83e-20!71;UBERON:0007284!2.83e-20!71;UBERON:0003056!4.24e-20!49;UBERON:0002616!4.82e-20!49;UBERON:0001017!9.21e-20!73;UBERON:0005743!9.21e-20!73;UBERON:0002020!1.94e-19!34;UBERON:0000073!2.81e-19!75;UBERON:0001016!2.81e-19!75;UBERON:0007811!3.82e-19!86;UBERON:0003080!8.14e-17!40;UBERON:0004121!2.86e-16!102;UBERON:0000924!2.86e-16!102;UBERON:0006601!2.86e-16!102;UBERON:0000153!3.05e-16!94;UBERON:0002780!3.31e-16!39;UBERON:0001890!3.31e-16!39;UBERON:0006240!3.31e-16!39;UBERON:0002791!6.31e-16!29;UBERON:0003528!6.31e-16!29;UBERON:0001893!6.31e-16!29;UBERON:0000956!9.54e-11!21;UBERON:0001869!9.54e-11!21;UBERON:0000203!9.54e-11!21;UBERON:0002021!7.24e-10!10;UBERON:0000411!7.24e-10!10;UBERON:0001950!7.24e-10!10;UBERON:0002619!1.03e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.16e-33,64;UBERON:0003075,1.16e-33,64;UBERON:0007284,1.16e-33,64;UBERON:0000073,1.54e-31,54;UBERON:0002020,1.04e-28,34;UBERON:0010371,1.66e-28,73;UBERON:0001049,3.57e-28,52;UBERON:0005068,3.57e-28,52;UBERON:0006241,3.57e-28,52;UBERON:0007135,3.57e-28,52;UBERON:0004121,5.56e-28,95;UBERON:0000924,5.56e-28,95;UBERON:0006601,5.56e-28,95;UBERON:0003056,1.60e-26,49;UBERON:0001017,2.07e-26,73;UBERON:0001016,1.71e-25,75;UBERON:0002021,5.48e-22,10;UBERON:0000411,5.48e-22,10;UBERON:0001950,5.48e-22,10;UBERON:0000955,2.64e-21,47;UBERON:0006238,2.64e-21,47;UBERON:0003528,5.15e-21,29;UBERON:0002791,5.15e-21,29;UBERON:0001893,5.15e-21,29;UBERON:0010314,6.28e-21,92;UBERON:0002616,6.86e-20,46;UBERON:0003080,1.56e-19,40;UBERON:0002780,2.56e-18,39;UBERON:0001890,2.56e-18,39;UBERON:0006240,2.56e-18,39;UBERON:0002619,3.80e-17,17;UBERON:0000956,7.05e-16,21;UBERON:0001869,7.05e-16,21;UBERON:0000203,7.05e-16,21;UBERON:0002240,4.26e-11,6;UBERON:0005174,4.26e-11,6;UBERON:0001137,4.26e-11,6;UBERON:0001948,1.33e-09,5;UBERON:0002315,1.33e-09,5;UBERON:0003076,3.56e-09,12;UBERON:0003057,3.56e-09,12;UBERON:0000025,5.19e-09,114;UBERON:0002950,3.79e-08,4;UBERON:0001891,3.79e-08,4;UBERON:0009616,3.79e-08,4;UBERON:0010286,3.79e-08,4;UBERON:0004111,5.64e-08,122;UBERON:0000970,6.96e-08,9;UBERON:0000019,6.96e-08,9;UBERON:0000047,6.96e-08,9;UBERON:0010312,6.96e-08,9;UBERON:0004088,6.96e-08,9;UBERON:0002104,6.96e-08,9;UBERON:0001456,6.96e-08,9;UBERON:0003072,6.96e-08,9;UBERON:0004128,6.96e-08,9;UBERON:0003071,6.96e-08,9;UBERON:0000483,3.13e-07,174;UBERON:0000119,4.66e-07,176;UBERON:0004684,6.14e-07,3;UBERON:0002275,6.14e-07,3;UBERON:0002038,8.94e-07,3;UBERON:0009663,8.94e-07,3;UBERON:0009661,8.94e-07,3;UBERON:0000125,8.94e-07,3;UBERON:0002308,8.94e-07,3
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0.768436610643109,0.829516898467821,0.945041568321835,0.210324961351382,1.42825492201902,1.10434270475807,0.857435594504678,0.287536413054709,0,2.20231761998777,2.55374676170375,1.53606533256243,0.659431438650969,0.548925861614458,1.04182674111352,1.67509799400829,2.8138130501584,1.37518422999129,2.06240009831567,1.56608848879013,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.04853447583376,6.40500843946077,0.879580464790051,3.82413504423008,4.60287823194595,1.45451631191692,4.54275536589721,0.305518091550949,0,0,0,0.390361328888111,1.14951052216736,1.62055916824814,1.50704817835715,3.74200745332303,2.8185018462667,2.43624483855295,0,0,0,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.44066457330998,0,0,0.426576501070468,1.39342003116263,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.502518772325447,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,1.28440471990234,2.46144541843627,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,1.92792789853084,0.283880170416537,0.178065603667255,0.651547837414304,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.643011105094777,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.480781798079875,0.443068581523732,0.100966449948148,0.457240839929999,0.100826185136841,0.38983152295901,0.481059208201647,0.116876902181569,0,0,0,0,0,0,0,0,0,4.51801474093653,1.84130094602871,2.86447756719698,3.43706364687375,3.42541259885321,3.7769694869485,4.72515750162264,3.15224842256954,3.17199686288943,4.65984280576638,0.103787347584177,0.399024873401031,0.341467211508268,0,0.419226325255965,0.183843508450014,1.33348036680969,0.618105171716683,0,0.252697211763798,0.50695859978048,0.754505365544305,0.37456602987953,0.384150914429216,0.459483751644906,0.476293691283074,0.231768651889711,0.38581844092741,0,0.294397840268795,0.342869252385415,1.06485483695602,0.953744759789284,0,0.376437521661322,0.592302255241736,0.73171189149109,0.263069711437843,0.271608227691724,0,0.474540072496697,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0.768436610643109,0.829516898467821,0.945041568321835,0.210324961351382,1.42825492201902,1.10434270475807,0.857435594504678,0.287536413054709,0,2.20231761998777,2.55374676170375,1.53606533256243,0.659431438650969,0.548925861614458,1.04182674111352,1.67509799400829,2.8138130501584,1.37518422999129,2.06240009831567,1.56608848879013,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.04853447583376,6.40500843946077,0.879580464790051,3.82413504423008,4.60287823194595,1.45451631191692,4.54275536589721,0.305518091550949,0,0,0,0.390361328888111,1.14951052216736,1.62055916824814,1.50704817835715,3.74200745332303,2.8185018462667,2.43624483855295,0,0,0,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.44066457330998,0,0,0.426576501070468,1.39342003116263,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.502518772325447,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,1.28440471990234,2.46144541843627,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,1.92792789853084,0.283880170416537,0.178065603667255,0.651547837414304,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.643011105094777,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.480781798079875,0.443068581523732,0.100966449948148,0.457240839929999,0.100826185136841,0.38983152295901,0.481059208201647,0.116876902181569,0,0,0,0,0,0,0,0,0,4.51801474093653,1.84130094602871,2.86447756719698,3.43706364687375,3.42541259885321,3.7769694869485,4.72515750162264,3.15224842256954,3.17199686288943,4.65984280576638,0.103787347584177,0.399024873401031,0.341467211508268,0,0.419226325255965,0.183843508450014,1.33348036680969,0.618105171716683,0,0.252697211763798,0.50695859978048,0.754505365544305,0.37456602987953,0.384150914429216,0.459483751644906,0.476293691283074,0.231768651889711,0.38581844092741,0,0.294397840268795,0.342869252385415,1.06485483695602,0.953744759789284,0,0.376437521661322,0.592302255241736,0.73171189149109,0.263069711437843,0.271608227691724,0,0.474540072496697,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0
|short_description=p3@Nlgn1
}}
}}

Latest revision as of 21:44, 1 October 2015

Short description:p3@Nlgn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nlgn1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 394bp_to_NM_138666, uc008otc.1, uc008otd.1_5end
EntrezGene:Nlgn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nlgn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C63.74
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.85e-1223
neuroblast (sensu Vertebrata)9.85e-1223
neuron2.44e-0733
neuronal stem cell2.44e-0733
neuroblast2.44e-0733
electrically signaling cell2.44e-0733
raphe nuclei neuron6.14e-073
neuron of the substantia nigra8.94e-073

Uber anatomy
Ontology termp-valuen
neurectoderm1.16e-3364
neural plate1.16e-3364
presumptive neural plate1.16e-3364
regional part of nervous system1.54e-3154
gray matter1.04e-2834
ecto-epithelium1.66e-2873
neural tube3.57e-2852
neural rod3.57e-2852
future spinal cord3.57e-2852
neural keel3.57e-2852
ectoderm-derived structure5.56e-2895
ectoderm5.56e-2895
presumptive ectoderm5.56e-2895
pre-chordal neural plate1.60e-2649
central nervous system2.07e-2673
nervous system1.71e-2575
occipital lobe5.48e-2210
visual cortex5.48e-2210
neocortex5.48e-2210
brain2.64e-2147
future brain2.64e-2147
brain grey matter5.15e-2129
regional part of telencephalon5.15e-2129
telencephalon5.15e-2129
structure with developmental contribution from neural crest6.28e-2192
regional part of brain6.86e-2046
anterior neural tube1.56e-1940
regional part of forebrain2.56e-1839
forebrain2.56e-1839
future forebrain2.56e-1839
regional part of cerebral cortex3.80e-1717
cerebral cortex7.05e-1621
cerebral hemisphere7.05e-1621
pallium7.05e-1621
spinal cord4.26e-116
dorsal region element4.26e-116
dorsum4.26e-116
regional part of spinal cord1.33e-095
gray matter of spinal cord1.33e-095
posterior neural tube3.56e-0912
chordal neural plate3.56e-0912
tube5.19e-09114
regional part of midbrain3.79e-084
midbrain3.79e-084
presumptive midbrain3.79e-084
midbrain neural tube3.79e-084
anatomical conduit5.64e-08122
eye6.96e-089
camera-type eye6.96e-089
simple eye6.96e-089
immature eye6.96e-089
ocular region6.96e-089
visual system6.96e-089
face6.96e-089
optic cup6.96e-089
optic vesicle6.96e-089
eye primordium6.96e-089
epithelium3.13e-07174
cell layer4.66e-07176
raphe nuclei6.14e-073
reticular formation6.14e-073
substantia nigra8.94e-073
telencephalic nucleus8.94e-073
midbrain nucleus8.94e-073
neural nucleus8.94e-073
nucleus of brain8.94e-073
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