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FFCP PHASE1:Mm9::chr5:112657653..112657700,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:112657653..112657700,-
|DHSsupport=NA
|short_description=p1@Miat
|DPIdataset=NA
|description=CAGE_peak_1_at_Miat_5end
|association_with_transcript=267bp_to_ENSMUST00000146058,NR_003718,NR_033657,uc008ysk.2,uc008ysl.2,uc008ysm.2,uc008ysn.2,uc008yso.2,uc008ysp.2,uc008ysq.2,uc008ysr.2,uc008yss.2,uc012ebf.1_5end
|EntrezGene=330166
|EntrezGene=330166
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=267bp_to_ENSMUST00000146058,NR_003718,NR_033657,uc008ysk.2,uc008ysl.2,uc008ysm.2,uc008ysn.2,uc008yso.2,uc008ysp.2,uc008ysq.2,uc008ysr.2,uc008yss.2,uc012ebf.1_5end
|cluster_id=chr5:112657653..112657700,-
|description=CAGE_peak_1_at_Miat_5end
|id=chr5:112657653..112657700,-
|ontology_enrichment_celltype=CL:0000540!3.20e-18!33;CL:0000047!3.20e-18!33;CL:0000031!3.20e-18!33;CL:0000404!3.20e-18!33;CL:0000221!1.37e-14!44;CL:0000133!1.37e-14!44;CL:0002319!3.25e-14!43;CL:0000393!1.93e-12!39;CL:0000211!1.93e-12!39;CL:0000117!9.40e-12!23;CL:0000337!9.40e-12!23;CL:0000055!1.82e-09!50;CL:0000107!2.84e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.35e-20,33;CL:0000047,1.35e-20,33;CL:0000031,1.35e-20,33;CL:0000404,1.35e-20,33;CL:0000221,2.01e-15,44;CL:0000133,2.01e-15,44;CL:0002319,5.36e-15,43;CL:0000393,7.00e-15,39;CL:0000211,7.00e-15,39;CL:0000117,3.33e-13,23;CL:0000337,3.33e-13,23;CL:0000107,4.33e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.10e-29!102;UBERON:0000924!1.10e-29!102;UBERON:0006601!1.10e-29!102;UBERON:0001017!6.83e-29!73;UBERON:0005743!6.83e-29!73;UBERON:0000073!1.36e-28!75;UBERON:0001016!1.36e-28!75;UBERON:0002346!5.96e-25!71;UBERON:0003075!5.96e-25!71;UBERON:0007284!5.96e-25!71;UBERON:0000033!2.42e-22!63;UBERON:0003056!1.45e-20!49;UBERON:0001049!1.59e-19!52;UBERON:0005068!1.59e-19!52;UBERON:0006241!1.59e-19!52;UBERON:0007135!1.59e-19!52;UBERON:0000955!4.06e-18!50;UBERON:0006238!4.06e-18!50;UBERON:0002616!6.30e-18!49;UBERON:0003080!3.26e-16!40;UBERON:0002020!1.05e-15!34;UBERON:0002780!1.09e-15!39;UBERON:0001890!1.09e-15!39;UBERON:0006240!1.09e-15!39;UBERON:0002791!2.35e-13!29;UBERON:0003528!2.35e-13!29;UBERON:0001893!2.35e-13!29;UBERON:0000153!4.75e-11!94;UBERON:0007811!2.20e-10!86;UBERON:0000956!6.97e-10!21;UBERON:0001869!6.97e-10!21;UBERON:0000203!6.97e-10!21;UBERON:0002619!4.71e-08!17;UBERON:0002021!5.65e-08!10;UBERON:0000411!5.65e-08!10;UBERON:0001950!5.65e-08!10;UBERON:0002410!2.84e-07!9;UBERON:0000468!7.77e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.85e-33,95;UBERON:0000924,3.85e-33,95;UBERON:0006601,3.85e-33,95;UBERON:0001017,1.40e-31,73;UBERON:0001016,1.29e-30,75;UBERON:0002346,5.34e-29,64;UBERON:0003075,5.34e-29,64;UBERON:0007284,5.34e-29,64;UBERON:0010371,2.30e-28,73;UBERON:0003056,8.96e-24,49;UBERON:0000073,2.30e-22,54;UBERON:0001049,2.44e-21,52;UBERON:0005068,2.44e-21,52;UBERON:0006241,2.44e-21,52;UBERON:0007135,2.44e-21,52;UBERON:0003080,8.82e-19,40;UBERON:0000955,3.07e-18,47;UBERON:0006238,3.07e-18,47;UBERON:0002020,3.17e-18,34;UBERON:0002780,3.52e-18,39;UBERON:0001890,3.52e-18,39;UBERON:0006240,3.52e-18,39;UBERON:0002616,5.04e-18,46;UBERON:0010314,1.20e-16,92;UBERON:0003528,1.56e-15,29;UBERON:0002791,1.56e-15,29;UBERON:0001893,1.56e-15,29;UBERON:0000956,1.47e-11,21;UBERON:0001869,1.47e-11,21;UBERON:0000203,1.47e-11,21;UBERON:0002619,1.84e-09,17;UBERON:0002021,6.86e-09,10;UBERON:0000411,6.86e-09,10;UBERON:0001950,6.86e-09,10;UBERON:0002410,4.33e-08,9
|phase1_expression=39.8770629290937,0,0,0,0,1.6787927191189,2.10251376535973,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,12.246233781754,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,9.15705656797875,0,0,0.839918529752175,0,0,0,0,0,0,0,63.9320016316329,61.8919445748278,60.8478147365932,0,0,0.449949858640699,0,0,4.79360176829448,5.76327457982332,44.3791540680284,39.1517221161903,31.3384192413559,37.1346279724945,31.8050698970323,42.626798126804,53.5776182991941,68.0221902091416,45.1475112097494,24.7713435885264,25.4986845205364,67.7895518933196,41.6268778390964,43.7567231267678,21.7762739221077,39.9561453122493,35.1435969886663,49.2029737741025,40.7183007085434,45.295065335548,0.832988126665025,1.5870027622425,0,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,22.1124169049388,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0.148442139064825,7.28638372417771,6.08930956624282,1.38369298353635,4.97384713823654,5.29149182110672,0,0,0.144599356919912,0,3.72063754879041,3.3126227769059,1.45462575940567,0,0.878342391034642,1.46612694769419,0,0,0,0,46.7346794943047,21.5025283324754,38.7015404507622,74.7444576826789,88.221832778964,27.4280218818619,51.5927216555469,2.03678727700633,1.11966273549084,0,1.26265113531884,31.2289063110489,94.4897649221574,70.4042927538916,89.5186617944147,128.725056394312,127.985606564565,146.268392037737,7.24369438069244,1.72454394346274,12.2918952109083,14.0760899331159,7.01426343768239,7.78532297831674,6.61679116392116,7.61393904709391,0.796137067273973,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0,0.536546802799238,0,0.329119699826961,0,0.243206428637567,0,0,0,92.527577368216,40.9560357269552,0.660837565967596,0.528901133327089,5.54549451391608,11.3795969211615,13.4022159774977,10.0841762311671,5.33707305227689,5.32631753115166,0.949058123089023,2.14108641141214,2.5133520880027,2.18852119245266,1.16978452271472,0,0.432276099749388,0,0.379335801906163,1.5994791765362,0,0.610953983535943,0.387904974335251,0.49095073923223,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,1.51593129416388,2.11854469374634,0.678980343100753,0.469380496577004,0.167506257441816,0,0.585400943573396,0,0.221464689648775,0,0,0.172684981865896,0.289298117163023,0,0,0,0,32.1101179975584,36.8044695899518,0,1.26235463602186,93.0749247277957,99.1714410513462,157.474503742676,61.892918669711,90.456261677452,124.270597016297,98.7738112086742,151.973046113882,195.667450083529,12.2102100240287,0.141940085208269,1.78065603667255,2.60619134965722,0.164970122972535,0,6.06951590387454,6.34879469625977,2.82907619633847,2.65771703592696,4.30409207121498,2.84271122485043,1.09060118843252,1.42598951353889,0.632073515871632,0,0,17.702859499197,34.3916689599803,28.8469864835543,10.0738406464848,4.78818630834139,9.27517851530767,10.3665882979336,5.78483403317739,0.469343416127421,0,0.441056796109924,3.62749756471256,3.06782410722221,3.07595917133595,3.10368094408155,3.11867709515616,0.582961673259701,36.3433591940599,0,0.82554747185289,0,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,8.69923982348122,11.3858901591035,7.34436317588249,6.06356058441959,5.02233896616208,1.07891477107857,1.07449492442937,0,0.388844919875379,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0.810900861160657,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0,0,0,0,0.288635524920988,0,0.680191150845634,0,0,0,0.579568782096571,0.93841237725591,0,0.428736758158132,0,108.432353782477,98.969925849043,109.423043066925,100.877818035745,119.889440959862,120.107629684962,97.8782625336118,104.474519148019,103.316469248399,110.800706714889,15.4643147900423,87.3864472748258,49.5127456686989,17.0174701947806,11.1094976192831,10.6629234901008,14.0015438515018,14.6284890639615,16.6877988987744,11.3713745293709,17.2365923925363,18.8626341386076,13.3907355681932,14.0855335290712,12.9804159839686,14.7651044297753,14.8331937209415,14.6611007552416,13.5988347265091,19.5774563778748,11.6575545811041,12.7782580434723,13.1139904471027,12.7904846636449,18.0690010397435,14.63832716526,15.0000937755674,18.1518100892112,14.3952360676613,15.7119836064167,16.6089025373844,12.7070782264477,21.2800142448238,13.479505183179,13.3105561576988,22.2331414364772,14.0358965067245,15.4707158914775,10.5208582637864,5.51478547798789,4.86922454802885
|phase1_expression=39.8770629290937,0,0,0,0,1.6787927191189,2.10251376535973,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,12.246233781754,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,9.15705656797875,0,0,0.839918529752175,0,0,0,0,0,0,0,63.9320016316329,61.8919445748278,60.8478147365932,0,0,0.449949858640699,0,0,4.79360176829448,5.76327457982332,44.3791540680284,39.1517221161903,31.3384192413559,37.1346279724945,31.8050698970323,42.626798126804,53.5776182991941,68.0221902091416,45.1475112097494,24.7713435885264,25.4986845205364,67.7895518933196,41.6268778390964,43.7567231267678,21.7762739221077,39.9561453122493,35.1435969886663,49.2029737741025,40.7183007085434,45.295065335548,0.832988126665025,1.5870027622425,0,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,22.1124169049388,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0.148442139064825,7.28638372417771,6.08930956624282,1.38369298353635,4.97384713823654,5.29149182110672,0,0,0.144599356919912,0,3.72063754879041,3.3126227769059,1.45462575940567,0,0.878342391034642,1.46612694769419,0,0,0,0,46.7346794943047,21.5025283324754,38.7015404507622,74.7444576826789,88.221832778964,27.4280218818619,51.5927216555469,2.03678727700633,1.11966273549084,0,1.26265113531884,31.2289063110489,94.4897649221574,70.4042927538916,89.5186617944147,128.725056394312,127.985606564565,146.268392037737,7.24369438069244,1.72454394346274,12.2918952109083,14.0760899331159,7.01426343768239,7.78532297831674,6.61679116392116,7.61393904709391,0.796137067273973,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0,0.536546802799238,0,0.329119699826961,0,0.243206428637567,0,0,0,92.527577368216,40.9560357269552,0.660837565967596,0.528901133327089,5.54549451391608,11.3795969211615,13.4022159774977,10.0841762311671,5.33707305227689,5.32631753115166,0.949058123089023,2.14108641141214,2.5133520880027,2.18852119245266,1.16978452271472,0,0.432276099749388,0,0.379335801906163,1.5994791765362,0,0.610953983535943,0.387904974335251,0.49095073923223,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,1.51593129416388,2.11854469374634,0.678980343100753,0.469380496577004,0.167506257441816,0,0.585400943573396,0,0.221464689648775,0,0,0.172684981865896,0.289298117163023,0,0,0,0,32.1101179975584,36.8044695899518,0,1.26235463602186,93.0749247277957,99.1714410513462,157.474503742676,61.892918669711,90.456261677452,124.270597016297,98.7738112086742,151.973046113882,195.667450083529,12.2102100240287,0.141940085208269,1.78065603667255,2.60619134965722,0.164970122972535,0,6.06951590387454,6.34879469625977,2.82907619633847,2.65771703592696,4.30409207121498,2.84271122485043,1.09060118843252,1.42598951353889,0.632073515871632,0,0,17.702859499197,34.3916689599803,28.8469864835543,10.0738406464848,4.78818630834139,9.27517851530767,10.3665882979336,5.78483403317739,0.469343416127421,0,0.441056796109924,3.62749756471256,3.06782410722221,3.07595917133595,3.10368094408155,3.11867709515616,0.582961673259701,36.3433591940599,0,0.82554747185289,0,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,8.69923982348122,11.3858901591035,7.34436317588249,6.06356058441959,5.02233896616208,1.07891477107857,1.07449492442937,0,0.388844919875379,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0.810900861160657,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0,0,0,0,0.288635524920988,0,0.680191150845634,0,0,0,0.579568782096571,0.93841237725591,0,0.428736758158132,0,108.432353782477,98.969925849043,109.423043066925,100.877818035745,119.889440959862,120.107629684962,97.8782625336118,104.474519148019,103.316469248399,110.800706714889,15.4643147900423,87.3864472748258,49.5127456686989,17.0174701947806,11.1094976192831,10.6629234901008,14.0015438515018,14.6284890639615,16.6877988987744,11.3713745293709,17.2365923925363,18.8626341386076,13.3907355681932,14.0855335290712,12.9804159839686,14.7651044297753,14.8331937209415,14.6611007552416,13.5988347265091,19.5774563778748,11.6575545811041,12.7782580434723,13.1139904471027,12.7904846636449,18.0690010397435,14.63832716526,15.0000937755674,18.1518100892112,14.3952360676613,15.7119836064167,16.6089025373844,12.7070782264477,21.2800142448238,13.479505183179,13.3105561576988,22.2331414364772,14.0358965067245,15.4707158914775,10.5208582637864,5.51478547798789,4.86922454802885
|short_description=p1@Miat
}}
}}

Latest revision as of 15:32, 1 October 2015

Short description:p1@Miat
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Miat_5end
Coexpression cluster:NA
Association with transcript: 267bp_to_ENSMUST00000146058, NR_003718, NR_033657, uc008ysk.2, uc008ysl.2, uc008ysm.2, uc008ysn.2, uc008yso.2, uc008ysp.2, uc008ysq.2, uc008ysr.2, uc008yss.2, uc012ebf.1_5end
EntrezGene:Miat
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Miat

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G739.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C363.93
Mouse Granule cells, donor2.CNhs12357.11731-123E361.89
Mouse Granule cells, donor3.CNhs12108.11636-122C760.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D544.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F539.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F137.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D242.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F253.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D668.02
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D345.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D467.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F441.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D843.76
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D649.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F640.72
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C57.29
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C15.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A446.73
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F138.70
cortex, adult.CNhs10473.12-14D574.74
cortex, neonate N30.CNhs11107.1392-42F288.22
diencephalon, adult.CNhs10482.20-12F227.43
diencephalon, neonate N30.CNhs11201.1388-42B251.59
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C631.23
eyeball, embryo E14.CNhs10521.399-16E294.49
eyeball, embryo E15.CNhs10593.426-16C970.40
eyeball, embryo E17.CNhs11023.1261-18D489.52
eyeball, neonate N00.CNhs11207.633-15C6128.73
eyeball, neonate N01.CNhs11140.1532-43E7127.99
eyeball, neonate N02.CNhs11205.1551-44G8146.27
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H212.29
forelimb, embryo E13.CNhs10589.384-1E214.08
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B57.61
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E892.53
hippocampus, neonate N00.CNhs11228.627-43G140.96
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D511.38
intestine, embryo E15.CNhs10602.976-16D813.40
intestine, embryo E16.CNhs10585.463-22H410.08
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F75.33
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C232.11
medulla oblongata, neonate N30.CNhs11200.1396-42A336.80
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E193.07
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E299.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3157.47
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D761.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D890.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9124.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D498.77
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5151.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6195.67
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G817.70
pituitary gland, embryo E12.CNhs11018.346-16E634.39
pituitary gland, embryo E13.CNhs11009.370-44C728.85
pituitary gland, embryo E14.CNhs11037.398-44A510.07
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F69.28
pituitary gland, embryo E17.CNhs11039.1265-44F510.37
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H33.08
skin, neonate N06.CNhs11097.693-20I53.10
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C936.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E38.70
stomach, embryo E15.CNhs10603.1252-16G811.39
stomach, embryo E16.CNhs11022.459-17D47.34
stomach, embryo E17.CNhs11006.1035-18D56.06
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1108.43
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A298.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3109.42
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7100.88
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4119.89
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5120.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A697.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7104.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8103.32
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9110.80
whole body, embryo E11.CNhs11014.324-5I815.46
whole body, embryo E12.CNhs10587.857-27C987.39
whole body, embryo E13.CNhs10512.372-23H249.51
whole body, embryo E14.5.CNhs10578.420-27D217.02
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F210.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.63
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.24
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.86
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.83
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.79
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.48
whole body, embryo E17.5.CNhs10513.490-9F913.31
whole body, embryo E17.CNhs10517.475-3I522.23
whole body, embryo E18.CNhs10516.493-3B314.04
whole body, neonate N00.CNhs10525.657-19C215.47
whole body, neonate N01.CNhs10576.659-23C610.52
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.85e-3395
ectoderm3.85e-3395
presumptive ectoderm3.85e-3395
central nervous system1.40e-3173
nervous system1.29e-3075
neurectoderm5.34e-2964
neural plate5.34e-2964
presumptive neural plate5.34e-2964
ecto-epithelium2.30e-2873
pre-chordal neural plate8.96e-2449
regional part of nervous system2.30e-2254
neural tube2.44e-2152
neural rod2.44e-2152
future spinal cord2.44e-2152
neural keel2.44e-2152
anterior neural tube8.82e-1940
brain3.07e-1847
future brain3.07e-1847
gray matter3.17e-1834
regional part of forebrain3.52e-1839
forebrain3.52e-1839
future forebrain3.52e-1839
regional part of brain5.04e-1846
structure with developmental contribution from neural crest1.20e-1692
brain grey matter1.56e-1529
regional part of telencephalon1.56e-1529
telencephalon1.56e-1529
cerebral cortex1.47e-1121
cerebral hemisphere1.47e-1121
pallium1.47e-1121
regional part of cerebral cortex1.84e-0917
occipital lobe6.86e-0910
visual cortex6.86e-0910
neocortex6.86e-0910
autonomic nervous system4.33e-089
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