FFCP PHASE1:Mm9::chr6:17257746..17257750,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:17257746..17257750,+
|short_description=p14@Cav1
|description=CAGE_peak_14_at_Cav1_5end
|association_with_transcript=23bp_to_ENSMUST00000133065,uc009azp.1_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12389 | |EntrezGene=12389 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=619 | |||
|TSSclassifier=NA | |||
|UniProt=P49817 | |UniProt=P49817 | ||
|association_with_transcript=23bp_to_ENSMUST00000133065,uc009azp.1_5end | |||
|cluster_id=chr6:17257746..17257750,+ | |||
|description=CAGE_peak_14_at_Cav1_5end | |||
|id=chr6:17257746..17257750,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,9.49e-12,3;CL:0000359,9.49e-12,3;CL:0002539,9.49e-12,3;CL:0000514,9.49e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!8.32e-08!14;UBERON:0000117!8.32e-08!14;UBERON:0000171!8.32e-08!14;UBERON:0000170!8.32e-08!14;UBERON:0005597!8.32e-08!14;UBERON:0000118!8.32e-08!14;UBERON:0005153!8.82e-08!17;UBERON:0005178!5.77e-07!17;UBERON:0005181!5.77e-07!17;UBERON:0002224!5.77e-07!17;UBERON:0000915!5.77e-07!17;UBERON:0008947!5.77e-07!17;UBERON:0003258!5.77e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,4.72e-19,4;UBERON:0001637,4.72e-19,4;UBERON:0004573,4.72e-19,4;UBERON:0003509,4.72e-19,4;UBERON:0004571,4.72e-19,4;UBERON:0010191,4.72e-19,4;UBERON:0004572,4.72e-19,4;UBERON:0000055,2.22e-15,5;UBERON:0007500,2.22e-15,5;UBERON:0001981,2.22e-15,5;UBERON:0002049,2.22e-15,5;UBERON:0007798,2.22e-15,5;UBERON:0004537,2.22e-15,5;UBERON:0006965,2.22e-15,5;UBERON:0002048,2.40e-14,14;UBERON:0000117,2.40e-14,14;UBERON:0000171,2.40e-14,14;UBERON:0000170,2.40e-14,14;UBERON:0005597,2.40e-14,14;UBERON:0000118,2.40e-14,14;UBERON:0005153,7.89e-12,17;UBERON:0005178,7.89e-12,17;UBERON:0005181,7.89e-12,17;UBERON:0002224,7.89e-12,17;UBERON:0000915,7.89e-12,17;UBERON:0008947,7.89e-12,17;UBERON:0003258,7.89e-12,17;UBERON:0001135,9.49e-12,3;UBERON:0004237,9.49e-12,3;UBERON:0004695,9.49e-12,3;UBERON:0002111,9.49e-12,3;UBERON:0004178,9.49e-12,3;UBERON:0005157,4.61e-10,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,1.82478476195126,0.734187008646726,0,0.65407546914134,0.439372365468944,0.777719596297134,0,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.37863096666592,0.226714680320357,0.289864488701678,0,0,0,0,0,0.280888840263504,0.681721290312231,0.259786004602869,0.35333957451034,0,0,0,0,0,0.506719730950197,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0.251333182659351,0,4.19338135067744,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.350296027101508,0,0.32833492815819,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,1.79763881730844,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,2.40179147216586,0.189491411770485,0.325929952884052,0,0,0.502518772325447,3.57065461329021,1.75620283072019,0.157635144106191,0.44292937929755,0.797273843287435,1.47476983244164,0.518054945597687,2.89298117163023,0,0,0,0.275936746304732,0,0,0.983609672260053,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0.32977250588296,1.13025098687134,0.603129249281559,0.716234064018819,0,0.291480836629851,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,0.134864346384821,0.330613822901344,0.523511883968059,0.259229946583586,0,0,0,0,0.194451188344048,0,0.337912250981556,0,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.73260649706906,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.320125762024346,0.287177344778066,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.423073039458382,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.859484216193193,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,1.82478476195126,0.734187008646726,0,0.65407546914134,0.439372365468944,0.777719596297134,0,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.37863096666592,0.226714680320357,0.289864488701678,0,0,0,0,0,0.280888840263504,0.681721290312231,0.259786004602869,0.35333957451034,0,0,0,0,0,0.506719730950197,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0.251333182659351,0,4.19338135067744,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.350296027101508,0,0.32833492815819,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,1.79763881730844,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,2.40179147216586,0.189491411770485,0.325929952884052,0,0,0.502518772325447,3.57065461329021,1.75620283072019,0.157635144106191,0.44292937929755,0.797273843287435,1.47476983244164,0.518054945597687,2.89298117163023,0,0,0,0.275936746304732,0,0,0.983609672260053,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0.32977250588296,1.13025098687134,0.603129249281559,0.716234064018819,0,0.291480836629851,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,0.134864346384821,0.330613822901344,0.523511883968059,0.259229946583586,0,0,0,0,0.194451188344048,0,0.337912250981556,0,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.73260649706906,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.320125762024346,0.287177344778066,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.423073039458382,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.859484216193193,0.382576664137687,0,0.231867835620421 | ||
|short_description=p14@Cav1 | |||
}} | }} |
Latest revision as of 23:26, 26 September 2015
Short description: | p14@Cav1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Cav1_5end |
Coexpression cluster: | MCL_coexpression_mm9:619 |
Association with transcript: | 23bp_to_ENSMUST00000133065, uc009azp.1_5end |
EntrezGene: | Cav1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 9.49e-12 | 3 |
vascular associated smooth muscle cell | 9.49e-12 | 3 |
aortic smooth muscle cell | 9.49e-12 | 3 |
smooth muscle myoblast | 9.49e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
aorta | 4.72e-19 | 4 |
artery | 4.72e-19 | 4 |
systemic artery | 4.72e-19 | 4 |
arterial blood vessel | 4.72e-19 | 4 |
systemic arterial system | 4.72e-19 | 4 |
aortic system | 4.72e-19 | 4 |
arterial system | 4.72e-19 | 4 |
vessel | 2.22e-15 | 5 |
epithelial tube open at both ends | 2.22e-15 | 5 |
blood vessel | 2.22e-15 | 5 |
vasculature | 2.22e-15 | 5 |
vascular system | 2.22e-15 | 5 |
blood vasculature | 2.22e-15 | 5 |
vascular cord | 2.22e-15 | 5 |
lung | 2.40e-14 | 14 |
respiratory tube | 2.40e-14 | 14 |
respiration organ | 2.40e-14 | 14 |
pair of lungs | 2.40e-14 | 14 |
lung primordium | 2.40e-14 | 14 |
lung bud | 2.40e-14 | 14 |
epithelial bud | 7.89e-12 | 17 |
thoracic cavity element | 7.89e-12 | 17 |
thoracic segment organ | 7.89e-12 | 17 |
thoracic cavity | 7.89e-12 | 17 |
thoracic segment of trunk | 7.89e-12 | 17 |
respiratory primordium | 7.89e-12 | 17 |
endoderm of foregut | 7.89e-12 | 17 |
smooth muscle tissue | 9.49e-12 | 3 |
blood vessel smooth muscle | 9.49e-12 | 3 |
arterial system smooth muscle | 9.49e-12 | 3 |
artery smooth muscle tissue | 9.49e-12 | 3 |
aorta smooth muscle tissue | 9.49e-12 | 3 |
epithelial fold | 4.61e-10 | 20 |