FFCP PHASE1:Mm9::chr7:107756174..107756337,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:107756174..107756337,+
|short_description=p1@Rab6a
|description=CAGE_peak_1_at_Rab6a_5end
|association_with_transcript=0bp_to_ENSMUST00000098252_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19346 | |EntrezGene=19346 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=P35279 | |UniProt=P35279 | ||
|association_with_transcript=0bp_to_ENSMUST00000098252_5end | |||
|cluster_id=chr7:107756174..107756337,+ | |||
|description=CAGE_peak_1_at_Rab6a_5end | |||
|id=chr7:107756174..107756337,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.49e-13!33;CL:0000047!3.49e-13!33;CL:0000031!3.49e-13!33;CL:0000404!3.49e-13!33;CL:0000221!3.55e-13!44;CL:0000133!3.55e-13!44;CL:0002319!5.90e-13!43;CL:0000055!1.36e-12!50;CL:0000393!1.98e-12!39;CL:0000211!1.98e-12!39;CL:0002321!1.50e-11!70;CL:0000220!1.50e-11!70;CL:0000117!1.34e-10!23;CL:0000337!1.34e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.49e-13,33;CL:0000047,3.49e-13,33;CL:0000031,3.49e-13,33;CL:0000404,3.49e-13,33;CL:0000221,3.55e-13,44;CL:0000133,3.55e-13,44;CL:0002319,5.90e-13,43;CL:0000393,1.98e-12,39;CL:0000211,1.98e-12,39;CL:0002321,1.50e-11,70;CL:0000117,1.34e-10,23;CL:0000337,1.34e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.00e-25!75;UBERON:0001016!3.00e-25!75;UBERON:0001017!1.62e-24!73;UBERON:0005743!1.62e-24!73;UBERON:0004121!1.82e-19!102;UBERON:0000924!1.82e-19!102;UBERON:0006601!1.82e-19!102;UBERON:0001049!1.14e-16!52;UBERON:0005068!1.14e-16!52;UBERON:0006241!1.14e-16!52;UBERON:0007135!1.14e-16!52;UBERON:0002020!7.27e-16!34;UBERON:0000955!8.84e-16!50;UBERON:0006238!8.84e-16!50;UBERON:0002616!2.34e-15!49;UBERON:0000033!5.89e-14!63;UBERON:0002791!2.15e-13!29;UBERON:0003528!2.15e-13!29;UBERON:0001893!2.15e-13!29;UBERON:0003080!3.14e-12!40;UBERON:0002346!3.44e-12!71;UBERON:0003075!3.44e-12!71;UBERON:0007284!3.44e-12!71;UBERON:0002780!1.19e-11!39;UBERON:0001890!1.19e-11!39;UBERON:0006240!1.19e-11!39;UBERON:0003056!2.41e-10!49;UBERON:0000956!1.36e-09!21;UBERON:0001869!1.36e-09!21;UBERON:0000203!1.36e-09!21;UBERON:0004111!1.12e-08!122;UBERON:0002619!2.10e-08!17;UBERON:0002021!4.41e-08!10;UBERON:0000411!4.41e-08!10;UBERON:0001950!4.41e-08!10;UBERON:0000025!5.35e-08!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.00e-25,75;UBERON:0001017,1.62e-24,73;UBERON:0004121,6.02e-23,95;UBERON:0000924,6.02e-23,95;UBERON:0006601,6.02e-23,95;UBERON:0000073,7.07e-18,54;UBERON:0001049,1.14e-16,52;UBERON:0005068,1.14e-16,52;UBERON:0006241,1.14e-16,52;UBERON:0007135,1.14e-16,52;UBERON:0002020,7.27e-16,34;UBERON:0010371,1.54e-15,73;UBERON:0002346,1.63e-15,64;UBERON:0003075,1.63e-15,64;UBERON:0007284,1.63e-15,64;UBERON:0000955,4.98e-14,47;UBERON:0006238,4.98e-14,47;UBERON:0002616,1.28e-13,46;UBERON:0003528,2.15e-13,29;UBERON:0002791,2.15e-13,29;UBERON:0001893,2.15e-13,29;UBERON:0003080,3.14e-12,40;UBERON:0010314,8.77e-12,92;UBERON:0002780,1.19e-11,39;UBERON:0001890,1.19e-11,39;UBERON:0006240,1.19e-11,39;UBERON:0003056,2.41e-10,49;UBERON:0000956,1.36e-09,21;UBERON:0001869,1.36e-09,21;UBERON:0000203,1.36e-09,21;UBERON:0004111,1.12e-08,122;UBERON:0011216,1.32e-08,194;UBERON:0002619,2.10e-08,17;UBERON:0002021,4.41e-08,10;UBERON:0000411,4.41e-08,10;UBERON:0001950,4.41e-08,10;UBERON:0000025,5.35e-08,114 | |||
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| ||
|short_description=p1@Rab6a | |||
}} | }} |
Latest revision as of 14:53, 25 September 2015
Short description: | p1@Rab6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rab6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 0bp_to_ENSMUST00000098252_5end |
EntrezGene: | Rab6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.49e-13 | 33 |
neuronal stem cell | 3.49e-13 | 33 |
neuroblast | 3.49e-13 | 33 |
electrically signaling cell | 3.49e-13 | 33 |
ectodermal cell | 3.55e-13 | 44 |
neurectodermal cell | 3.55e-13 | 44 |
neural cell | 5.90e-13 | 43 |
electrically responsive cell | 1.98e-12 | 39 |
electrically active cell | 1.98e-12 | 39 |
embryonic cell | 1.50e-11 | 70 |
CNS neuron (sensu Vertebrata) | 1.34e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.34e-10 | 23 |