FFCP PHASE1:Mm9::chr7:135019127..135019137,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:135019127..135019137,-
|short_description=p6@Zfp668
|description=CAGE_peak_6_at_Zfp668_5end
|association_with_transcript=22bp_to_ENSMUST00000106261_5end
|...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=244219 | |EntrezGene=244219 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K2R5 | |UniProt=Q8K2R5 | ||
|association_with_transcript=22bp_to_ENSMUST00000106261_5end | |||
|cluster_id=chr7:135019127..135019137,- | |||
|description=CAGE_peak_6_at_Zfp668_5end | |||
|id=chr7:135019127..135019137,- | |||
|ontology_enrichment_celltype=CL:0000540!2.05e-14!33;CL:0000047!2.05e-14!33;CL:0000031!2.05e-14!33;CL:0000404!2.05e-14!33;CL:0002319!1.88e-13!43;CL:0000393!2.94e-13!39;CL:0000211!2.94e-13!39;CL:0000221!8.11e-13!44;CL:0000133!8.11e-13!44;CL:0000117!1.36e-12!23;CL:0000337!1.36e-12!23;CL:0000055!3.52e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.19e-26,23;CL:0000337,2.19e-26,23;CL:0000540,2.21e-24,33;CL:0000047,2.21e-24,33;CL:0000031,2.21e-24,33;CL:0000404,2.21e-24,33;CL:0002319,5.54e-21,43;CL:0000221,1.88e-20,44;CL:0000133,1.88e-20,44;CL:0000393,2.72e-20,39;CL:0000211,2.72e-20,39;CL:0002613,5.59e-15,3;CL:0000120,1.77e-14,3;CL:0002609,3.67e-12,6;CL:0002321,5.86e-12,70;CL:0000723,1.27e-08,91;CL:0000048,1.27e-08,91;CL:0000034,6.19e-08,97;CL:0002608,6.86e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.01e-16!73;UBERON:0005743!1.01e-16!73;UBERON:0000073!1.62e-16!75;UBERON:0001016!1.62e-16!75;UBERON:0004121!5.75e-15!102;UBERON:0000924!5.75e-15!102;UBERON:0006601!5.75e-15!102;UBERON:0002346!6.30e-12!71;UBERON:0003075!6.30e-12!71;UBERON:0007284!6.30e-12!71;UBERON:0000033!1.50e-11!63;UBERON:0000955!2.77e-10!50;UBERON:0006238!2.77e-10!50;UBERON:0001049!2.99e-10!52;UBERON:0005068!2.99e-10!52;UBERON:0006241!2.99e-10!52;UBERON:0007135!2.99e-10!52;UBERON:0003056!6.12e-10!49;UBERON:0002616!7.83e-10!49;UBERON:0002020!7.11e-08!34;UBERON:0000153!7.76e-08!94;UBERON:0007811!1.34e-07!86;UBERON:0003080!1.72e-07!40;UBERON:0002780!1.96e-07!39;UBERON:0001890!1.96e-07!39;UBERON:0006240!1.96e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.38e-13,73;UBERON:0001016,8.91e-13,75;UBERON:0003528,1.86e-11,29;UBERON:0002791,1.86e-11,29;UBERON:0001893,1.86e-11,29;UBERON:0004121,5.51e-11,95;UBERON:0000924,5.51e-11,95;UBERON:0006601,5.51e-11,95;UBERON:0002020,1.40e-09,34;UBERON:0002420,2.02e-09,8;UBERON:0007245,2.02e-09,8;UBERON:0010009,2.02e-09,8;UBERON:0010011,2.02e-09,8;UBERON:0000454,2.02e-09,8;UBERON:0000369,3.52e-09,5;UBERON:0002435,3.52e-09,5;UBERON:0000204,3.52e-09,5;UBERON:0010082,3.52e-09,5;UBERON:0002780,3.47e-08,39;UBERON:0001890,3.47e-08,39;UBERON:0006240,3.47e-08,39;UBERON:0003080,6.00e-08,40;UBERON:0003056,9.55e-08,49;UBERON:0000073,7.66e-07,54;UBERON:0002616,9.67e-07,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0.65407546914134,0.659058548203415,0,0,0,0,0,0,0.257259436035947,0,0,2.02316460859598,4.23192783417626,1.26766280701236,0.338844532069132,0,0,0,0,0.898800331555214,1.15265491596466,1.55534418462716,1.35005938331691,0.630974884054146,0.856952953211411,0.662605622854841,0.979926393719632,1.15014565221884,2.75765635983006,1.10115880999389,0.127687338085188,0.921639199537461,2.50583946687368,3.65950574409639,2.6045668527838,0,0,1.06958773443767,0.589257170947335,0.284743361598206,0.372798891650601,0,0.302286240427142,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0.608930956624282,0.691846491768175,0,0,0,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0.753926112677186,0.695297280769106,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,1.30120442962704,0.689706313300419,0.360124259610698,0.452114453507145,0.340182495756639,0.2562274405697,0.374806898238915,0.258703370739016,1.5089759505299,0.945530400839096,0.175951124163949,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,2.26390147234426,0,0,0.853153002140936,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0.948339504765408,0.799739588268102,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.678980343100753,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0.163934945376675,0,0.315508219416257,0.780877488593277,0,1.19484398976276,0.222798674082394,0.566153061577665,1.21443210502468,0.876767573733936,0,0.642642632843614,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0.754420319023592,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0.646793418913773,0.214337035031592,0.709360934569094,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0,0,1.73984796469624,0.813277868507395,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0.314578033277133,0,0,0,0.202725215290164,0.308132871494482,0.389762468933385,0.179026695667481,0.39736270956253,0,0,0.302899349844443,0,0.201652370273681,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0,0,0,1.55681021376265,0,0.682934423016537,0.972426868273176,0.628839487883947,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.384150914429216,0.114870937911227,0.952587382566147,0.231768651889711,0.192909220463705,0,0.588795680537589,0.342869252385415,0,0.476872379894642,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0.818462086339379,0.154936841185966,0.771626443924566,0.499621155875892,0,0,0,0,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0.65407546914134,0.659058548203415,0,0,0,0,0,0,0.257259436035947,0,0,2.02316460859598,4.23192783417626,1.26766280701236,0.338844532069132,0,0,0,0,0.898800331555214,1.15265491596466,1.55534418462716,1.35005938331691,0.630974884054146,0.856952953211411,0.662605622854841,0.979926393719632,1.15014565221884,2.75765635983006,1.10115880999389,0.127687338085188,0.921639199537461,2.50583946687368,3.65950574409639,2.6045668527838,0,0,1.06958773443767,0.589257170947335,0.284743361598206,0.372798891650601,0,0.302286240427142,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0.608930956624282,0.691846491768175,0,0,0,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0.753926112677186,0.695297280769106,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,1.30120442962704,0.689706313300419,0.360124259610698,0.452114453507145,0.340182495756639,0.2562274405697,0.374806898238915,0.258703370739016,1.5089759505299,0.945530400839096,0.175951124163949,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,2.26390147234426,0,0,0.853153002140936,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0.948339504765408,0.799739588268102,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.678980343100753,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0.163934945376675,0,0.315508219416257,0.780877488593277,0,1.19484398976276,0.222798674082394,0.566153061577665,1.21443210502468,0.876767573733936,0,0.642642632843614,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0.754420319023592,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0.646793418913773,0.214337035031592,0.709360934569094,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0,0,1.73984796469624,0.813277868507395,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0.314578033277133,0,0,0,0.202725215290164,0.308132871494482,0.389762468933385,0.179026695667481,0.39736270956253,0,0,0.302899349844443,0,0.201652370273681,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0,0,0,1.55681021376265,0,0.682934423016537,0.972426868273176,0.628839487883947,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.384150914429216,0.114870937911227,0.952587382566147,0.231768651889711,0.192909220463705,0,0.588795680537589,0.342869252385415,0,0.476872379894642,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0.818462086339379,0.154936841185966,0.771626443924566,0.499621155875892,0,0,0,0,0.463735671240843 | ||
|short_description=p6@Zfp668 | |||
}} | }} |
Latest revision as of 23:09, 25 September 2015
Short description: | p6@Zfp668 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Zfp668_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 22bp_to_ENSMUST00000106261_5end |
EntrezGene: | Zfp668 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.19e-26 | 23 |
neuroblast (sensu Vertebrata) | 2.19e-26 | 23 |
neuron | 2.21e-24 | 33 |
neuronal stem cell | 2.21e-24 | 33 |
neuroblast | 2.21e-24 | 33 |
electrically signaling cell | 2.21e-24 | 33 |
neural cell | 5.54e-21 | 43 |
ectodermal cell | 1.88e-20 | 44 |
neurectodermal cell | 1.88e-20 | 44 |
electrically responsive cell | 2.72e-20 | 39 |
electrically active cell | 2.72e-20 | 39 |
striatum neuron | 5.59e-15 | 3 |
granule cell | 1.77e-14 | 3 |
neuron of cerebral cortex | 3.67e-12 | 6 |
embryonic cell | 5.86e-12 | 70 |
somatic stem cell | 1.27e-08 | 91 |
multi fate stem cell | 1.27e-08 | 91 |
stem cell | 6.19e-08 | 97 |
hippocampal neuron | 6.86e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.38e-13 | 73 |
nervous system | 8.91e-13 | 75 |
brain grey matter | 1.86e-11 | 29 |
regional part of telencephalon | 1.86e-11 | 29 |
telencephalon | 1.86e-11 | 29 |
ectoderm-derived structure | 5.51e-11 | 95 |
ectoderm | 5.51e-11 | 95 |
presumptive ectoderm | 5.51e-11 | 95 |
gray matter | 1.40e-09 | 34 |
basal ganglion | 2.02e-09 | 8 |
nuclear complex of neuraxis | 2.02e-09 | 8 |
aggregate regional part of brain | 2.02e-09 | 8 |
collection of basal ganglia | 2.02e-09 | 8 |
cerebral subcortex | 2.02e-09 | 8 |
corpus striatum | 3.52e-09 | 5 |
striatum | 3.52e-09 | 5 |
ventral part of telencephalon | 3.52e-09 | 5 |
future corpus striatum | 3.52e-09 | 5 |
regional part of forebrain | 3.47e-08 | 39 |
forebrain | 3.47e-08 | 39 |
future forebrain | 3.47e-08 | 39 |
anterior neural tube | 6.00e-08 | 40 |
pre-chordal neural plate | 9.55e-08 | 49 |
regional part of nervous system | 7.66e-07 | 54 |
regional part of brain | 9.67e-07 | 46 |