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FFCP PHASE1:Mm9::chr8:17535205..17535219,-: Difference between revisions

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(Created page with "{{FFCP |id=chr8:17535205..17535219,- |short_description=p3@Csmd1 |description=CAGE_peak_3_at_Csmd1_5end |association_with_transcript=61bp_to_ENSMUST00000082104,ENSMUST0000...")
 
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{{FFCP
{{FFCP
|id=chr8:17535205..17535219,-
|DHSsupport=NA
|short_description=p3@Csmd1
|DPIdataset=NA
|description=CAGE_peak_3_at_Csmd1_5end
|association_with_transcript=61bp_to_ENSMUST00000082104,ENSMUST00000131778,ENSMUST00000138348_5end
|EntrezGene=94109
|EntrezGene=94109
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q923L3
|UniProt=Q923L3
|association_with_transcript=61bp_to_ENSMUST00000082104,ENSMUST00000131778,ENSMUST00000138348_5end
|cluster_id=chr8:17535205..17535219,-
|description=CAGE_peak_3_at_Csmd1_5end
|id=chr8:17535205..17535219,-
|ontology_enrichment_celltype=CL:0000221!2.03e-14!44;CL:0000133!2.03e-14!44;CL:0002319!6.75e-14!43;CL:0000055!1.21e-12!50;CL:0000540!1.86e-12!33;CL:0000047!1.86e-12!33;CL:0000031!1.86e-12!33;CL:0000404!1.86e-12!33;CL:0000393!1.28e-11!39;CL:0000211!1.28e-11!39;CL:0000117!1.68e-10!23;CL:0000337!1.68e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.17e-13,23;CL:0000337,3.17e-13,23;CL:0000540,4.78e-12,33;CL:0000047,4.78e-12,33;CL:0000031,4.78e-12,33;CL:0000404,4.78e-12,33;CL:0000393,5.23e-12,39;CL:0000211,5.23e-12,39;CL:0000221,3.99e-10,44;CL:0000133,3.99e-10,44;CL:0002319,2.41e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.02e-28!75;UBERON:0001016!3.02e-28!75;UBERON:0001017!4.48e-27!73;UBERON:0005743!4.48e-27!73;UBERON:0004121!2.34e-21!102;UBERON:0000924!2.34e-21!102;UBERON:0006601!2.34e-21!102;UBERON:0001049!3.12e-19!52;UBERON:0005068!3.12e-19!52;UBERON:0006241!3.12e-19!52;UBERON:0007135!3.12e-19!52;UBERON:0002020!2.44e-18!34;UBERON:0000955!3.08e-18!50;UBERON:0006238!3.08e-18!50;UBERON:0002616!1.57e-17!49;UBERON:0000033!6.95e-16!63;UBERON:0002791!3.64e-15!29;UBERON:0003528!3.64e-15!29;UBERON:0001893!3.64e-15!29;UBERON:0003080!1.41e-13!40;UBERON:0002346!1.88e-13!71;UBERON:0003075!1.88e-13!71;UBERON:0007284!1.88e-13!71;UBERON:0002780!6.82e-13!39;UBERON:0001890!6.82e-13!39;UBERON:0006240!6.82e-13!39;UBERON:0000956!8.87e-11!21;UBERON:0001869!8.87e-11!21;UBERON:0000203!8.87e-11!21;UBERON:0003056!1.83e-10!49;UBERON:0002619!5.68e-10!17;UBERON:0002021!1.68e-09!10;UBERON:0000411!1.68e-09!10;UBERON:0001950!1.68e-09!10;UBERON:0007811!2.37e-08!86;UBERON:0000153!3.55e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.86e-33,75;UBERON:0001017,8.75e-33,73;UBERON:0000073,8.33e-30,54;UBERON:0001049,6.99e-27,52;UBERON:0005068,6.99e-27,52;UBERON:0006241,6.99e-27,52;UBERON:0007135,6.99e-27,52;UBERON:0004121,1.56e-25,95;UBERON:0000924,1.56e-25,95;UBERON:0006601,1.56e-25,95;UBERON:0002020,5.87e-24,34;UBERON:0002346,1.22e-21,64;UBERON:0003075,1.22e-21,64;UBERON:0007284,1.22e-21,64;UBERON:0000955,6.87e-21,47;UBERON:0006238,6.87e-21,47;UBERON:0002616,1.35e-19,46;UBERON:0002021,1.91e-19,10;UBERON:0000411,1.91e-19,10;UBERON:0001950,1.91e-19,10;UBERON:0010371,3.47e-19,73;UBERON:0003528,1.23e-17,29;UBERON:0002791,1.23e-17,29;UBERON:0001893,1.23e-17,29;UBERON:0003080,2.49e-16,40;UBERON:0002780,4.44e-15,39;UBERON:0001890,4.44e-15,39;UBERON:0006240,4.44e-15,39;UBERON:0002619,8.51e-15,17;UBERON:0000956,1.42e-13,21;UBERON:0001869,1.42e-13,21;UBERON:0000203,1.42e-13,21;UBERON:0010314,2.09e-13,92;UBERON:0003056,3.07e-12,49;UBERON:0003076,7.46e-12,12;UBERON:0003057,7.46e-12,12;UBERON:0002240,1.49e-09,6;UBERON:0005174,1.49e-09,6;UBERON:0001137,1.49e-09,6;UBERON:0000025,3.27e-09,114;UBERON:0004111,9.23e-09,122;UBERON:0001948,3.63e-08,5;UBERON:0002315,3.63e-08,5;UBERON:0002950,1.36e-07,4;UBERON:0001891,1.36e-07,4;UBERON:0009616,1.36e-07,4;UBERON:0010286,1.36e-07,4;UBERON:0011216,4.63e-07,194
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,1.11514624341466,1.28482726513177,0,0.436050312760893,0.439372365468944,0.777719596297134,0.419959264876088,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0.449949858640699,0,0,0.898800331555214,0.384218305321555,0.414758449233911,0.135005938331691,0.210324961351382,2.85650984403804,1.10434270475807,0.244981598429908,0.191690942036473,0,5.50579404996943,3.95830748064082,3.37934373163736,0.923204014111357,1.46380229763855,0.52091337055676,1.95428099300967,5.6276261003168,3.0559649555362,3.53554302568401,1.70846016958924,1.86399445825301,0.681535739998656,1.5870027622425,0.289864488701678,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,1.17112318804619,1.04723353406728,0.255457055208591,0,0,0,6.89036941262184,5.49000723382352,0.502617408451458,18.7730265807659,16.1100738118108,3.94797284663164,6.97637431191358,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0.204109497453984,0,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,9.67333763394985,1.44066457330998,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0.8858587585951,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,3.05046120976805,3.39913891117389,0,0,0.94652465824877,0,1.07711698866399,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,1.16902343164525,1.97643888973262,5.46246237917072,1.13552068166615,0,0.488660878060728,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0,0.658196082408484,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,2.59595422814714,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,24.2843292325339,14.7304075682297,17.1868654031819,13.0608418581203,17.8121455140367,21.9064230243013,20.925697507186,22.9663813644352,17.2194115413998,18.6393712230655,0,0,0.682934423016537,0.486213434136588,0.209613162627982,0.367687016900028,1.11123363900808,0.412070114477788,0.962757628775446,0.252697211763798,1.01391719956096,0.943131706930381,0.187283014939765,0.192075457214608,0.746661096422973,0.476293691283074,0.579421629724277,0.192909220463705,0,0.735994600671987,1.02860775715625,0.354951612318675,0.953744759789284,0.581385666529314,0.470546902076653,0.846146078916765,0.182927972872773,0.263069711437843,0.950628796921032,1.68342681497322,0.949080144993393,0.492522411877817,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.467863216890817,1.28922632428979,0.765153328275374,0.661774257358546,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,1.11514624341466,1.28482726513177,0,0.436050312760893,0.439372365468944,0.777719596297134,0.419959264876088,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0.449949858640699,0,0,0.898800331555214,0.384218305321555,0.414758449233911,0.135005938331691,0.210324961351382,2.85650984403804,1.10434270475807,0.244981598429908,0.191690942036473,0,5.50579404996943,3.95830748064082,3.37934373163736,0.923204014111357,1.46380229763855,0.52091337055676,1.95428099300967,5.6276261003168,3.0559649555362,3.53554302568401,1.70846016958924,1.86399445825301,0.681535739998656,1.5870027622425,0.289864488701678,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,1.17112318804619,1.04723353406728,0.255457055208591,0,0,0,6.89036941262184,5.49000723382352,0.502617408451458,18.7730265807659,16.1100738118108,3.94797284663164,6.97637431191358,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0.204109497453984,0,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,9.67333763394985,1.44066457330998,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0.8858587585951,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,3.05046120976805,3.39913891117389,0,0,0.94652465824877,0,1.07711698866399,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,1.16902343164525,1.97643888973262,5.46246237917072,1.13552068166615,0,0.488660878060728,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0,0.658196082408484,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,2.59595422814714,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,24.2843292325339,14.7304075682297,17.1868654031819,13.0608418581203,17.8121455140367,21.9064230243013,20.925697507186,22.9663813644352,17.2194115413998,18.6393712230655,0,0,0.682934423016537,0.486213434136588,0.209613162627982,0.367687016900028,1.11123363900808,0.412070114477788,0.962757628775446,0.252697211763798,1.01391719956096,0.943131706930381,0.187283014939765,0.192075457214608,0.746661096422973,0.476293691283074,0.579421629724277,0.192909220463705,0,0.735994600671987,1.02860775715625,0.354951612318675,0.953744759789284,0.581385666529314,0.470546902076653,0.846146078916765,0.182927972872773,0.263069711437843,0.950628796921032,1.68342681497322,0.949080144993393,0.492522411877817,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.467863216890817,1.28922632428979,0.765153328275374,0.661774257358546,0
|short_description=p3@Csmd1
}}
}}

Latest revision as of 19:40, 1 October 2015

Short description:p3@Csmd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Csmd1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 61bp_to_ENSMUST00000082104, ENSMUST00000131778, ENSMUST00000138348_5end
EntrezGene:Csmd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Csmd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D518.77
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.28
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.64
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.17e-1323
neuroblast (sensu Vertebrata)3.17e-1323
neuron4.78e-1233
neuronal stem cell4.78e-1233
neuroblast4.78e-1233
electrically signaling cell4.78e-1233
electrically responsive cell5.23e-1239
electrically active cell5.23e-1239
ectodermal cell3.99e-1044
neurectodermal cell3.99e-1044
neural cell2.41e-0943

Uber anatomy
Ontology termp-valuen
nervous system1.86e-3375
central nervous system8.75e-3373
regional part of nervous system8.33e-3054
neural tube6.99e-2752
neural rod6.99e-2752
future spinal cord6.99e-2752
neural keel6.99e-2752
ectoderm-derived structure1.56e-2595
ectoderm1.56e-2595
presumptive ectoderm1.56e-2595
gray matter5.87e-2434
neurectoderm1.22e-2164
neural plate1.22e-2164
presumptive neural plate1.22e-2164
brain6.87e-2147
future brain6.87e-2147
regional part of brain1.35e-1946
occipital lobe1.91e-1910
visual cortex1.91e-1910
neocortex1.91e-1910
ecto-epithelium3.47e-1973
brain grey matter1.23e-1729
regional part of telencephalon1.23e-1729
telencephalon1.23e-1729
anterior neural tube2.49e-1640
regional part of forebrain4.44e-1539
forebrain4.44e-1539
future forebrain4.44e-1539
regional part of cerebral cortex8.51e-1517
cerebral cortex1.42e-1321
cerebral hemisphere1.42e-1321
pallium1.42e-1321
structure with developmental contribution from neural crest2.09e-1392
pre-chordal neural plate3.07e-1249
posterior neural tube7.46e-1212
chordal neural plate7.46e-1212
spinal cord1.49e-096
dorsal region element1.49e-096
dorsum1.49e-096
tube3.27e-09114
anatomical conduit9.23e-09122
regional part of spinal cord3.63e-085
gray matter of spinal cord3.63e-085
regional part of midbrain1.36e-074
midbrain1.36e-074
presumptive midbrain1.36e-074
midbrain neural tube1.36e-074
organ system subdivision4.63e-07194
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