FFCP PHASE1:Mm9::chr8:72240479..72240488,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:72240479..72240488,+
|short_description=p@chr8:72240479..72240488,+
|description=CAGE_peak_at_chr8:72240479..72240488,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:72240479..72240488,+ | |||
|description=CAGE_peak_at_chr8:72240479..72240488,+ | |||
|id=chr8:72240479..72240488,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.68e-08!13;CL:0000051!1.68e-08!13;CL:0000838!2.93e-08!12;CL:0000791!4.99e-08!9;CL:0000789!4.99e-08!9;CL:0002420!4.99e-08!9;CL:0002419!4.99e-08!9;CL:0000790!4.99e-08!9;CL:0000084!2.03e-07!11;CL:0000827!2.03e-07!11;CL:0000624!2.61e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.55e-13,12;CL:0000624,1.23e-12,8;CL:0000542,5.55e-12,13;CL:0000051,5.55e-12,13;CL:0000791,2.91e-11,9;CL:0000789,2.91e-11,9;CL:0002420,2.91e-11,9;CL:0002419,2.91e-11,9;CL:0000790,2.91e-11,9;CL:0000084,2.93e-09,11;CL:0000827,2.93e-09,11;CL:0000738,3.75e-09,17;CL:0002087,3.75e-09,17;CL:0000988,5.86e-09,32;CL:0002032,5.86e-09,32;CL:0000037,5.86e-09,32;CL:0000837,5.86e-09,32;CL:0000034,5.43e-08,97;CL:0002320,6.71e-08,46;CL:0000134,6.71e-08,46;CL:0000945,8.50e-08,1;CL:0000236,8.50e-08,1;CL:0000826,8.50e-08,1;CL:0000213,1.14e-07,1;CL:0002078,1.14e-07,1;CL:0000115,1.14e-07,1;CL:0002262,1.14e-07,1;CL:1000398,1.14e-07,1;CL:0000815,1.33e-07,1;CL:0000792,1.33e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.19e-10,3;DOID:4045,8.19e-10,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.71e-08,46;UBERON:0002394,1.14e-07,1;UBERON:0001281,1.14e-07,1;UBERON:0000353,1.14e-07,1;UBERON:0003497,1.14e-07,1;UBERON:0003909,1.14e-07,1;UBERON:0003928,1.14e-07,1;UBERON:0003835,1.14e-07,1;UBERON:0003513,1.14e-07,1;UBERON:0001280,1.14e-07,1;UBERON:0004647,1.14e-07,1;UBERON:0002294,1.14e-07,1;UBERON:0001173,1.14e-07,1;UBERON:0004912,1.14e-07,1;UBERON:0005171,1.14e-07,1 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0,0,0,0,1.67860320474049,1.12630977721333,0.468129052643987,0.513653904676515,0.319088635981346,0.684802919724823,1.31130603628496,0,0,0,0.630924330716475,0,0.42438965179803,0.340173160604279,0.397163804803541,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0.612508068787107,2.92972141515835,0.7813353445238,3.66466620781659,8.2352408324342,0.683045484958446,2.91306211818692,0.251793635951155,0.202753862439029,0.367093504323363,0,0,0,0,0,0,2.34895648480831,1.45072428402269,0.672187598284928,0,0,0,0.202316460859598,0,0,0.677689064138264,0,0.449949858640699,0.988866362566974,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.73918693221007,0,0,0,0,0.448026887097336,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0.209446706813455,0,1.1981512450592,1.19980546198682,0.635351135365324,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0.281105173679186,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0.584799949701329,0.439100230582101,0.134206418760372,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0.861693590931196,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.370850604021019,0,0,0,0.188368457004691,0,0,0.679913719975421,1.81936888020755,1.10559979043539,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0.295379054349154,0,0,0,0,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0,0,0,0,1.67860320474049,1.12630977721333,0.468129052643987,0.513653904676515,0.319088635981346,0.684802919724823,1.31130603628496,0,0,0,0.630924330716475,0,0.42438965179803,0.340173160604279,0.397163804803541,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0.612508068787107,2.92972141515835,0.7813353445238,3.66466620781659,8.2352408324342,0.683045484958446,2.91306211818692,0.251793635951155,0.202753862439029,0.367093504323363,0,0,0,0,0,0,2.34895648480831,1.45072428402269,0.672187598284928,0,0,0,0.202316460859598,0,0,0.677689064138264,0,0.449949858640699,0.988866362566974,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.73918693221007,0,0,0,0,0.448026887097336,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0.209446706813455,0,1.1981512450592,1.19980546198682,0.635351135365324,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0.281105173679186,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0.584799949701329,0.439100230582101,0.134206418760372,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0.861693590931196,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.370850604021019,0,0,0,0.188368457004691,0,0,0.679913719975421,1.81936888020755,1.10559979043539,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0.295379054349154,0,0,0,0,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | ||
|short_description=p@chr8:72240479..72240488,+ | |||
}} | }} |
Latest revision as of 00:10, 4 August 2015
Short description: | p@chr8:72240479..72240488, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:72240479..72240488, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.55e-13 | 12 |
CD4-positive, alpha-beta T cell | 1.23e-12 | 8 |
lymphocyte | 5.55e-12 | 13 |
common lymphoid progenitor | 5.55e-12 | 13 |
mature alpha-beta T cell | 2.91e-11 | 9 |
alpha-beta T cell | 2.91e-11 | 9 |
immature T cell | 2.91e-11 | 9 |
mature T cell | 2.91e-11 | 9 |
immature alpha-beta T cell | 2.91e-11 | 9 |
T cell | 2.93e-09 | 11 |
pro-T cell | 2.93e-09 | 11 |
leukocyte | 3.75e-09 | 17 |
nongranular leukocyte | 3.75e-09 | 17 |
hematopoietic cell | 5.86e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.86e-09 | 32 |
hematopoietic stem cell | 5.86e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.86e-09 | 32 |
stem cell | 5.43e-08 | 97 |
connective tissue cell | 6.71e-08 | 46 |
mesenchymal cell | 6.71e-08 | 46 |
lymphocyte of B lineage | 8.50e-08 | 1 |
B cell | 8.50e-08 | 1 |
pro-B cell | 8.50e-08 | 1 |
lining cell | 1.14e-07 | 1 |
meso-epithelial cell | 1.14e-07 | 1 |
endothelial cell | 1.14e-07 | 1 |
endothelial cell of sinusoid | 1.14e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.14e-07 | 1 |
regulatory T cell | 1.33e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.33e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.71e-08 | 46 |
bile duct | 1.14e-07 | 1 |
hepatic sinusoid | 1.14e-07 | 1 |
parenchyma | 1.14e-07 | 1 |
abdomen blood vessel | 1.14e-07 | 1 |
sinusoid | 1.14e-07 | 1 |
digestive system duct | 1.14e-07 | 1 |
abdominal segment blood vessel | 1.14e-07 | 1 |
trunk blood vessel | 1.14e-07 | 1 |
liver parenchyma | 1.14e-07 | 1 |
liver lobule | 1.14e-07 | 1 |
biliary system | 1.14e-07 | 1 |
biliary tree | 1.14e-07 | 1 |
biliary bud | 1.14e-07 | 1 |
hepatic duct | 1.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.19e-10 | 3 |
muscle cancer | 8.19e-10 | 3 |