FFCP PHASE1:Mm9::chr8:74249549..74249583,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:74249549..74249583,-
|short_description=p2@Fcho1
|description=CAGE_peak_2_at_Fcho1_5end
|association_with_transcript=0bp_to_ENSMUST00000093444,ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74015 | |EntrezGene=74015 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3233 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K285,D6RCG0 | |UniProt=Q8K285,D6RCG0 | ||
|association_with_transcript=0bp_to_ENSMUST00000093444,ENSMUST00000136640,ENSMUST00000143699,NM_028715,NR_028267,uc009met.2,uc009mev.2_5end | |||
|cluster_id=chr8:74249549..74249583,- | |||
|description=CAGE_peak_2_at_Fcho1_5end | |||
|id=chr8:74249549..74249583,- | |||
|ontology_enrichment_celltype=CL:0000117!2.39e-10!23;CL:0000337!2.39e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.39e-11,23;CL:0000337,9.39e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.26e-16!86;UBERON:0001049!5.87e-16!52;UBERON:0005068!5.87e-16!52;UBERON:0006241!5.87e-16!52;UBERON:0007135!5.87e-16!52;UBERON:0000153!3.99e-15!94;UBERON:0000955!4.02e-15!50;UBERON:0006238!4.02e-15!50;UBERON:0002616!1.45e-14!49;UBERON:0002020!2.36e-14!34;UBERON:0000033!6.63e-14!63;UBERON:0003080!3.03e-13!40;UBERON:0001017!3.73e-13!73;UBERON:0005743!3.73e-13!73;UBERON:0002780!9.59e-13!39;UBERON:0001890!9.59e-13!39;UBERON:0006240!9.59e-13!39;UBERON:0002791!4.43e-12!29;UBERON:0003528!4.43e-12!29;UBERON:0001893!4.43e-12!29;UBERON:0000073!5.91e-12!75;UBERON:0001016!5.91e-12!75;UBERON:0003056!7.79e-12!49;UBERON:0002346!3.92e-10!71;UBERON:0003075!3.92e-10!71;UBERON:0007284!3.92e-10!71;UBERON:0004121!9.51e-09!102;UBERON:0000924!9.51e-09!102;UBERON:0006601!9.51e-09!102;UBERON:0000064!1.89e-08!99;UBERON:0000956!3.07e-08!21;UBERON:0001869!3.07e-08!21;UBERON:0000203!3.07e-08!21;UBERON:0002021!2.09e-07!10;UBERON:0000411!2.09e-07!10;UBERON:0001950!2.09e-07!10;UBERON:0002619!6.27e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.32e-18,54;UBERON:0001049,7.22e-17,52;UBERON:0005068,7.22e-17,52;UBERON:0006241,7.22e-17,52;UBERON:0007135,7.22e-17,52;UBERON:0002020,6.21e-15,34;UBERON:0000955,1.24e-14,47;UBERON:0006238,1.24e-14,47;UBERON:0002346,2.28e-14,64;UBERON:0003075,2.28e-14,64;UBERON:0007284,2.28e-14,64;UBERON:0010371,2.34e-14,73;UBERON:0002616,4.63e-14,46;UBERON:0003080,8.95e-14,40;UBERON:0002780,2.99e-13,39;UBERON:0001890,2.99e-13,39;UBERON:0006240,2.99e-13,39;UBERON:0001017,1.13e-12,73;UBERON:0003528,1.48e-12,29;UBERON:0002791,1.48e-12,29;UBERON:0001893,1.48e-12,29;UBERON:0003056,2.67e-12,49;UBERON:0001016,1.44e-11,75;UBERON:0004121,1.36e-10,95;UBERON:0000924,1.36e-10,95;UBERON:0006601,1.36e-10,95;UBERON:0000956,1.55e-08,21;UBERON:0001869,1.55e-08,21;UBERON:0000203,1.55e-08,21;UBERON:0002021,1.12e-07,10;UBERON:0000411,1.12e-07,10;UBERON:0001950,1.12e-07,10;UBERON:0002619,3.62e-07,17 | |||
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| ||
|short_description=p2@Fcho1 | |||
}} | }} |
Latest revision as of 18:38, 25 September 2015
Short description: | p2@Fcho1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fcho1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3233 |
Association with transcript: | 0bp_to_ENSMUST00000093444, ENSMUST00000136640, ENSMUST00000143699, NM_028715, NR_028267, uc009met.2, uc009mev.2_5end |
EntrezGene: | Fcho1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.39e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.39e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 7.32e-18 | 54 |
neural tube | 7.22e-17 | 52 |
neural rod | 7.22e-17 | 52 |
future spinal cord | 7.22e-17 | 52 |
neural keel | 7.22e-17 | 52 |
gray matter | 6.21e-15 | 34 |
brain | 1.24e-14 | 47 |
future brain | 1.24e-14 | 47 |
neurectoderm | 2.28e-14 | 64 |
neural plate | 2.28e-14 | 64 |
presumptive neural plate | 2.28e-14 | 64 |
ecto-epithelium | 2.34e-14 | 73 |
regional part of brain | 4.63e-14 | 46 |
anterior neural tube | 8.95e-14 | 40 |
regional part of forebrain | 2.99e-13 | 39 |
forebrain | 2.99e-13 | 39 |
future forebrain | 2.99e-13 | 39 |
central nervous system | 1.13e-12 | 73 |
brain grey matter | 1.48e-12 | 29 |
regional part of telencephalon | 1.48e-12 | 29 |
telencephalon | 1.48e-12 | 29 |
pre-chordal neural plate | 2.67e-12 | 49 |
nervous system | 1.44e-11 | 75 |
ectoderm-derived structure | 1.36e-10 | 95 |
ectoderm | 1.36e-10 | 95 |
presumptive ectoderm | 1.36e-10 | 95 |
cerebral cortex | 1.55e-08 | 21 |
cerebral hemisphere | 1.55e-08 | 21 |
pallium | 1.55e-08 | 21 |
occipital lobe | 1.12e-07 | 10 |
visual cortex | 1.12e-07 | 10 |
neocortex | 1.12e-07 | 10 |
regional part of cerebral cortex | 3.62e-07 | 17 |